BLASTX nr result

ID: Cocculus23_contig00052384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00052384
         (246 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75638.1| hypothetical protein VITISV_043620 [Vitis vinifera]    48   1e-11
emb|CAN69819.1| hypothetical protein VITISV_025708 [Vitis vinifera]    52   1e-10
emb|CAN64955.1| hypothetical protein VITISV_029829 [Vitis vinifera]    56   5e-06

>emb|CAN75638.1| hypothetical protein VITISV_043620 [Vitis vinifera]
          Length = 331

 Score = 48.1 bits (113), Expect(2) = 1e-11
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -3

Query: 214 KTTTTTQSEEVIPNQPVGELQNLQVAYRLNGKKYLKF 104
           +TT   QSEE I  Q  GELQN++ AYRLNGK YLK+
Sbjct: 6   ETTAIAQSEETIRPQHSGELQNIRAAYRLNGKNYLKW 42



 Score = 47.0 bits (110), Expect(2) = 1e-11
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -2

Query: 131 VEWEEVLKICLNW*GKGKLNHLLGTG*KQGDLKFDVWDEKYSM 3
           ++W ++++  L W  KGK+NHL+GT  K GD  F+ WDE+ SM
Sbjct: 40  LKWSQLVRTVLKW--KGKINHLMGTRPKLGDPHFEAWDEEDSM 80


>emb|CAN69819.1| hypothetical protein VITISV_025708 [Vitis vinifera]
          Length = 1626

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -3

Query: 217 SKTTTTTQSEEVIPNQPVGELQNLQVAYRLNGKKYLKF 104
           ++TT T QSEE+I  Q  GEL N+Q AYRLNGK YLK+
Sbjct: 5   AETTATAQSEEIIRPQHSGELHNIQAAYRLNGKNYLKW 42



 Score = 40.0 bits (92), Expect(2) = 1e-10
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = -2

Query: 131 VEWEEVLKICLNW*GKGKLNHLLGTG*KQGDLKFDVWDEKYSM 3
           ++W ++++  L   GK K++HL+GT  K GD  F+ WDE+ SM
Sbjct: 40  LKWSQLVRTMLK--GKEKISHLMGTRSKLGDPHFEAWDEEDSM 80


>emb|CAN64955.1| hypothetical protein VITISV_029829 [Vitis vinifera]
          Length = 1368

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
 Frame = -3

Query: 211 TTTTTQSEEVIPNQPVGELQNLQVAYRLNGKKYLKFV----SIGKGKGS*TIFLGQD 53
           TTTT QSEE++ +Q  GELQN+Q AYRL+GK YLK+     ++ KGKG     + +D
Sbjct: 7   TTTTAQSEEIVRSQQSGELQNIQAAYRLDGKNYLKWSQLVRTVLKGKGKIXHLMAKD 63


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