BLASTX nr result
ID: Cocculus23_contig00052382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00052382
(237 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 151 1e-34
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 150 2e-34
ref|XP_006663974.1| PREDICTED: 40S ribosomal protein S3a-like [O... 149 4e-34
ref|XP_006663973.1| PREDICTED: 40S ribosomal protein S3a-like [O... 149 4e-34
ref|XP_006663971.1| PREDICTED: 40S ribosomal protein S3a-like [O... 149 4e-34
ref|XP_006649574.1| PREDICTED: 40S ribosomal protein S3a-like [O... 149 4e-34
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A... 148 7e-34
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ... 148 7e-34
ref|XP_003572000.1| PREDICTED: 40S ribosomal protein S3a-like [B... 148 9e-34
emb|CBI34197.3| unnamed protein product [Vitis vinifera] 148 9e-34
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti... 148 9e-34
sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2 148 9e-34
gb|AAP80855.1| cyc07 [Triticum aestivum] 148 9e-34
ref|XP_004958212.1| PREDICTED: 40S ribosomal protein S3a-like [S... 147 2e-33
ref|XP_003559021.1| PREDICTED: 40S ribosomal protein S3a-like [B... 147 2e-33
ref|XP_004985319.1| PREDICTED: 40S ribosomal protein S3a-like is... 147 2e-33
ref|XP_004985318.1| PREDICTED: 40S ribosomal protein S3a-like is... 147 2e-33
ref|NP_001049289.1| Os03g0200500 [Oryza sativa Japonica Group] g... 147 2e-33
gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japo... 147 2e-33
gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indi... 147 2e-33
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 151 bits (381), Expect = 1e-34
Identities = 73/78 (93%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFE+ LADLQNDEDQSYRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQSYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 150 bits (378), Expect = 2e-34
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFE+ LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|XP_006663974.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 261
Score = 149 bits (376), Expect = 4e-34
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>ref|XP_006663973.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 261
Score = 149 bits (376), Expect = 4e-34
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>ref|XP_006663971.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 261
Score = 149 bits (376), Expect = 4e-34
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>ref|XP_006649574.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 260
Score = 149 bits (376), Expect = 4e-34
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
gi|548852191|gb|ERN10339.1| hypothetical protein
AMTR_s00026p00042160 [Amborella trichopoda]
Length = 261
Score = 148 bits (374), Expect = 7e-34
Identities = 69/78 (88%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLV++TQGTKIASEGLKHRVFE CLADLQNDEDQ+Y+K+RLR ED+QG+NVLTNFWGMD
Sbjct: 45 KTLVTRTQGTKIASEGLKHRVFECCLADLQNDEDQAYKKIRLRAEDIQGRNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 148 bits (374), Expect = 7e-34
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEVCLADLQ DEDQ+YRK+RLR EDVQGKNVLTNF+GMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|XP_003572000.1| PREDICTED: 40S ribosomal protein S3a-like [Brachypodium distachyon]
Length = 265
Score = 148 bits (373), Expect = 9e-34
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQG+NVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGRNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>emb|CBI34197.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 148 bits (373), Expect = 9e-34
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFE+ LADLQNDED +YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
Length = 261
Score = 148 bits (373), Expect = 9e-34
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFE+ LADLQNDED +YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2
Length = 234
Score = 148 bits (373), Expect = 9e-34
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFE+ LADLQNDED +YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>gb|AAP80855.1| cyc07 [Triticum aestivum]
Length = 242
Score = 148 bits (373), Expect = 9e-34
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQG NVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|XP_004958212.1| PREDICTED: 40S ribosomal protein S3a-like [Setaria italica]
Length = 262
Score = 147 bits (371), Expect = 2e-33
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQ+DEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>ref|XP_003559021.1| PREDICTED: 40S ribosomal protein S3a-like [Brachypodium distachyon]
Length = 265
Score = 147 bits (371), Expect = 2e-33
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQ DEDQ+YRK+RLR EDVQGKNVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQADEDQAYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|XP_004985319.1| PREDICTED: 40S ribosomal protein S3a-like isoform X2 [Setaria
italica]
Length = 263
Score = 147 bits (370), Expect = 2e-33
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQ+DEDQ+YRK+RLR ED+QG+NVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQAYRKIRLRAEDIQGRNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|XP_004985318.1| PREDICTED: 40S ribosomal protein S3a-like isoform X1 [Setaria
italica]
Length = 290
Score = 147 bits (370), Expect = 2e-33
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQ+DEDQ+YRK+RLR ED+QG+NVLTNFWGMD
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQAYRKIRLRAEDIQGRNVLTNFWGMD 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLVRKWQTLIE
Sbjct: 105 FTTDKLRSLVRKWQTLIE 122
>ref|NP_001049289.1| Os03g0200500 [Oryza sativa Japonica Group]
gi|1350986|sp|P49397.2|RS3A_ORYSJ RecName: Full=40S
ribosomal protein S3a; AltName: Full=CYC07 protein
gi|582044884|pdb|3J60|B Chain B, Localization Of The
Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|483431|dbj|BAA05059.1| cyc07 [Oryza sativa]
gi|108706696|gb|ABF94491.1| 40S ribosomal protein S3a,
putative, expressed [Oryza sativa Japonica Group]
gi|113547760|dbj|BAF11203.1| Os03g0200500 [Oryza sativa
Japonica Group] gi|125542785|gb|EAY88924.1| hypothetical
protein OsI_10409 [Oryza sativa Indica Group]
gi|125585284|gb|EAZ25948.1| hypothetical protein
OsJ_09804 [Oryza sativa Japonica Group]
gi|215697346|dbj|BAG91340.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737408|dbj|BAG96538.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 262
Score = 147 bits (370), Expect = 2e-33
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGM
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMS 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
Length = 764
Score = 147 bits (370), Expect = 2e-33
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGM
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMS 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122
>gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indica Group]
Length = 818
Score = 147 bits (370), Expect = 2e-33
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 235 KTLVSKTQGTKIASEGLKHRVFEVCLADLQNDEDQSYRKMRLRVEDVQGKNVLTNFWGMD 56
KTLVS+TQGTKIASEGLKHRVFEV LADLQNDEDQ+YRK+RLR EDVQGKNVLTNFWGM
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMS 104
Query: 55 FTTDKLRSLVRKWQTLIE 2
FTTDKLRSLV+KWQTLIE
Sbjct: 105 FTTDKLRSLVKKWQTLIE 122