BLASTX nr result

ID: Cocculus23_contig00052357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00052357
         (299 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC31207.1| DNA ligase 4 [Morus notabilis]                          56   6e-06

>gb|EXC31207.1| DNA ligase 4 [Morus notabilis]
          Length = 627

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = +2

Query: 5   PRNTT*WVLGRRKVRNRCIDLIKEIYNNVITIIKSMVGKTTKFPITLGLHQNKLM 169
           PR    WVL +R VR R I +IK++Y+ V+T ++++ G TT+FPI +GLHQ   +
Sbjct: 559 PREVLWWVLEKRGVRVRYIKVIKDMYDGVVTSVRTVGGYTTEFPIRIGLHQRSAL 613


Top