BLASTX nr result
ID: Cocculus23_contig00051843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00051843
(261 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 104 1e-20
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 103 2e-20
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669... 100 2e-19
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 98 1e-18
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 98 1e-18
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 98 1e-18
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 98 1e-18
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 97 2e-18
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 97 2e-18
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 96 4e-18
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 95 9e-18
emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera] 95 9e-18
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 95 1e-17
ref|XP_006603607.1| PREDICTED: uncharacterized protein LOC100791... 93 4e-17
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera] 93 4e-17
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 92 6e-17
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 92 6e-17
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g... 92 8e-17
emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera] 92 8e-17
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group] 92 8e-17
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 104 bits (259), Expect = 1e-20
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF LK L QKN+V GLP + P Q CE C++GKQHR F W K LELVHS+IC
Sbjct: 434 NFGGLKTLQQKNMVTGLPPIXTPSQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDIC 493
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ TS+GG R+F+TF+ D++ K W
Sbjct: 494 GPINPTSNGGKRYFITFIXDYSXKTW 519
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101216349 [Cucumis sativus]
Length = 1830
Score = 103 bits (258), Expect = 2e-20
Identities = 42/86 (48%), Positives = 63/86 (73%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
+F +L + Q+++V+G+ + Q CE C+ GK HR F T W ++KPLELVH+++C
Sbjct: 447 SFDTLSHMCQQHMVRGMSNIKKEDQLCEACVFGKHHRNSFPTGGSWRASKPLELVHTDLC 506
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GPM+TT+HGGNR+FLTF+ D++RK W
Sbjct: 507 GPMRTTTHGGNRYFLTFIDDYSRKTW 532
>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
Length = 711
Score = 100 bits (249), Expect = 2e-19
Identities = 40/81 (49%), Positives = 61/81 (75%)
Frame = -3
Query: 244 KLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNICGPMQT 65
+LLA+K +V+GLP + HP Q CEGC++GKQ R+ F + +TKPLEL+H+++CGP++
Sbjct: 354 ELLAKKEMVRGLPSINHPDQLCEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKP 413
Query: 64 TSHGGNRHFLTFVVDFTRKIW 2
S G N++FL F+ D++RK W
Sbjct: 414 NSFGKNKYFLLFIDDYSRKTW 434
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF L+LL++K +V+GLP + HP Q CEGC+LGKQ + F + + KPLEL+H+++C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP++ S G + +FL F+ DF+RK W
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTW 561
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF L+LL++K +V+GLP + HP Q CEGC+LGKQ + F + + KPLEL+H+++C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP++ S G + +FL F+ DF+RK W
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTW 561
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF L+LL++K +V+GLP + HP Q CEGC+LGKQ + F + + KPLEL+H+++C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP++ S G + +FL F+ DF+RK W
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTW 561
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF LK L KN+V GLP + Q CE C+ GKQHR F W K LELVHS+IC
Sbjct: 434 NFXXLKTLQXKNMVTGLPXIQTXSQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDIC 493
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ TS+GG R+F+TF+ D++ K W
Sbjct: 494 GPINPTSNGGKRYFITFIXDYSWKTW 519
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 97.1 bits (240), Expect = 2e-18
Identities = 40/86 (46%), Positives = 61/86 (70%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF L+ LA+K +V+ LP + HP Q CE C++GKQ R+ F + +TKPLEL+H+++C
Sbjct: 393 NFDGLERLAKKEMVRDLPSINHPDQLCERCLIGKQFRKSFPKESTTRATKPLELIHTDVC 452
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP++ S G N++FL F+ D++RK W
Sbjct: 453 GPIKPNSFGKNKYFLLFIDDYSRKTW 478
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 97.1 bits (240), Expect = 2e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -3
Query: 247 LKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNICGPMQ 68
LKLLA K +V GLPI+ K+ C C+ GKQHR+ + +T W S+ L+LVHS+ICGP+
Sbjct: 448 LKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPIT 507
Query: 67 TTSHGGNRHFLTFVVDFTRKIW 2
SH G R+ L+F+ DFTRK W
Sbjct: 508 PISHSGKRYILSFIDDFTRKTW 529
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF L+LL++K +V+GLP + HP Q CEGC+LG Q + F + + KPLEL+H+++C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP++ S G + +FL F+ DF+RK W
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTW 561
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 95.1 bits (235), Expect = 9e-18
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF L+LL++K +V+GLP + HP Q CEGC+LGKQ + F + + K LEL+H+++C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVC 535
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP++ S G + +FL F+ DF+RK W
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTW 561
>emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]
Length = 338
Score = 95.1 bits (235), Expect = 9e-18
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPK-QFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNI 83
NF SLK+L Q+ +V+GLP K + C+GC LGK HRQ F W + K LEL+H++I
Sbjct: 196 NFNSLKMLYQRKMVQGLPNTIEEKNEVCDGCALGKHHRQSFLKGVAWRAKKVLELIHTDI 255
Query: 82 CGPMQTTSHGGNRHFLTFVVDFTRKIW 2
CGPM S G N++F+ F+ DFTR W
Sbjct: 256 CGPMSIPSQGNNKYFVLFIDDFTRMTW 282
>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
Length = 1041
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF LK L QKN+V GLP + QFCE C++ KQH F W + K LELVHS+IC
Sbjct: 248 NFGGLKTLQQKNMVTGLPQIIASSQFCEECVVSKQHCNQFPQVKSWRAKKALELVHSDIC 307
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ S+G R+ +TF+ D++RKIW
Sbjct: 308 GPIIPNSNGSKRYIITFIDDYSRKIW 333
>ref|XP_006603607.1| PREDICTED: uncharacterized protein LOC100791776 [Glycine max]
Length = 1976
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/86 (45%), Positives = 60/86 (69%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF SLK+L +KN+V GLP + PK+ C C GKQ R+ + + P +TK L ++HS++C
Sbjct: 663 NFNSLKMLQKKNMVVGLPQIEEPKKICGKCCEGKQPRKSYKSAIPTRATKKLAIIHSDVC 722
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP + S GGN +F++F+ D+T+K+W
Sbjct: 723 GPFEAKSIGGNSYFVSFIDDYTKKMW 748
>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
Length = 808
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = -3
Query: 223 LVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNICGPMQTTSHGGNR 44
+V GLP + P Q CE C++GKQHR F W + K LELVHS+ICGP+ TS+GG R
Sbjct: 1 MVTGLPPIQTPSQICEECVVGKQHRYQFPKGKSWKANKVLELVHSDICGPINPTSNGGKR 60
Query: 43 HFLTFVVDFTRKIW 2
+F+TF+ D++RK W
Sbjct: 61 YFITFIDDYSRKTW 74
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 92.4 bits (228), Expect = 6e-17
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF ++KLLA K + G+P + HP Q C+ C++ KQ RQPF + + +PLEL+H ++C
Sbjct: 503 NFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLC 562
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ T+ GNR+F+ V DF+R +W
Sbjct: 563 GPITPTTMAGNRYFMLIVDDFSRWMW 588
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 92.4 bits (228), Expect = 6e-17
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF ++KLLA K + G+P + HP Q C+ C++ KQ RQPF + + +PLEL+H ++C
Sbjct: 503 NFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLC 562
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ T+ GNR+F+ V DF+R +W
Sbjct: 563 GPITPTTMAGNRYFMLIVDDFSRWMW 588
>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|31430018|gb|AAP51989.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113638707|dbj|BAF26012.1|
Os10g0130700 [Oryza sativa Japonica Group]
Length = 1426
Score = 92.0 bits (227), Expect = 8e-17
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF SL+ LAQ N+V+GLPI+ H Q C+GC+ GKQ R PF + + + LELVH ++C
Sbjct: 525 NFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLC 584
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ + GG ++FL V D +R +W
Sbjct: 585 GPITPATPGGRKYFLLLVDDMSRHMW 610
>emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]
Length = 567
Score = 92.0 bits (227), Expect = 8e-17
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPK-QFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNI 83
NF LK+L Q+ +V+ LP K + CE C LGK HRQ F W + K LEL+H++I
Sbjct: 133 NFNRLKMLCQRKMVQRLPNTIEEKNEICEDCXLGKHHRQSFXKGVAWRAKKVLELIHTDI 192
Query: 82 CGPMQTTSHGGNRHFLTFVVDFTRKIW 2
CGPM T SHG N++F+ F+ DF R W
Sbjct: 193 CGPMSTPSHGNNKYFVLFIDDFXRITW 219
>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
Length = 1426
Score = 92.0 bits (227), Expect = 8e-17
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = -3
Query: 259 NF*SLKLLAQKNLVKGLPIVYHPKQFCEGCMLGKQHRQPFATRTPWHSTKPLELVHSNIC 80
NF SL+ LAQ N+V+GLPI+ H Q C+GC+ GKQ R PF + + + LELVH ++C
Sbjct: 525 NFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLC 584
Query: 79 GPMQTTSHGGNRHFLTFVVDFTRKIW 2
GP+ + GG ++FL V D +R +W
Sbjct: 585 GPITPATPGGRKYFLLLVDDMSRHMW 610