BLASTX nr result
ID: Cocculus23_contig00050636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00050636
(327 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 125 5e-27
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 124 1e-26
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 122 5e-26
gb|AHN13809.1| movement protein [Aristotelia chilensis vein clea... 118 8e-25
ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626... 115 6e-24
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr... 114 1e-23
ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Popu... 110 2e-22
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 108 6e-22
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 108 6e-22
ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627... 106 4e-21
ref|XP_004508246.1| PREDICTED: probable flavin-containing monoox... 105 5e-21
ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutr... 104 1e-20
ref|XP_006478654.1| PREDICTED: uncharacterized protein LOC102625... 101 1e-19
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu... 101 1e-19
ref|XP_006408745.1| hypothetical protein EUTSA_v10002304mg, part... 100 2e-19
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 100 2e-19
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 100 2e-19
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 100 2e-19
ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobrom... 99 6e-19
ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Popu... 97 2e-18
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 125 bits (315), Expect = 5e-27
Identities = 61/108 (56%), Positives = 80/108 (74%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+ S++ D+C LK+T AEQYVTL PSELI +W GYTHLH G +RL LTLHGR + V
Sbjct: 87 IQSSRLDQCALKATSAEQYVTLEIPSELISNWKREGYTHLHLGGIRLILTLHGRKGLPVT 146
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKDLKTP 2
ARVALLDT F ++ ++IG V+TTL++G+VL T P+FN+SL+D P
Sbjct: 147 ARVALLDTRFKQFQDAVIGTVLTTLHAGSVLLTFYPNFNLSLQDPNLP 194
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 124 bits (312), Expect = 1e-26
Identities = 61/108 (56%), Positives = 79/108 (73%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+ S++ D+C LK+T AEQYVTL PSELI +W GYTHLH G +RL LTLHGR + V
Sbjct: 87 IQSSRLDQCALKATSAEQYVTLEIPSELISNWKREGYTHLHLGGIRLILTLHGRKGLPVT 146
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKDLKTP 2
ARVALLDT F ++ ++IG V+TTL+ G+VL T P+FN+SL+D P
Sbjct: 147 ARVALLDTRFKQFQDAVIGTVLTTLHVGSVLLTFYPNFNLSLQDPNLP 194
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 122 bits (306), Expect = 5e-26
Identities = 59/108 (54%), Positives = 79/108 (73%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+ S+ D+C L++T AEQYVTL PSELI +W GYTHLH G +RL LTLHGR + V
Sbjct: 87 IQSSCLDQCSLQATPAEQYVTLEIPSELISNWKREGYTHLHLGGIRLILTLHGRKGLPVT 146
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKDLKTP 2
AR+A+LDT F Y+ ++IG V+TTL++G+VL T P+FN+SL+D P
Sbjct: 147 ARLAMLDTRFKQYQDAVIGTVLTTLHAGSVLLTFYPNFNLSLQDPNLP 194
>gb|AHN13809.1| movement protein [Aristotelia chilensis vein clearing virus]
Length = 820
Score = 118 bits (296), Expect = 8e-25
Identities = 55/104 (52%), Positives = 75/104 (72%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ST+FD+C L +++ EQ+VTL PS W+ G+THLHFG VRLALT HGR + +
Sbjct: 101 VQSTRFDQCFLPASQKEQFVTLEIPSVYPSQWIAEGFTHLHFGAVRLALTFHGRKGLPIS 160
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
+R+ALLD+ FL Y+ + IG + TTLN+GTV T+ P+FN+ LKD
Sbjct: 161 SRIALLDSRFLEYQHACIGTIETTLNAGTVFVTLFPNFNMPLKD 204
>ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626000 [Citrus sinensis]
Length = 449
Score = 115 bits (288), Expect = 6e-24
Identities = 56/104 (53%), Positives = 75/104 (72%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V S++ +C L++T+AEQYVTL P++LI W GYTHLH G VRL LTLHGR + V
Sbjct: 341 VQSSRLHQCALQATQAEQYVTLEIPTDLIAQWQREGYTHLHLGGVRLILTLHGRKGLPVT 400
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
A +ALLDT F Y+ ++IG V+TTL++G L T P+FN+SL+D
Sbjct: 401 ASLALLDTRFKEYQHAVIGTVLTTLHAGNALLTFYPNFNLSLQD 444
>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
gi|557099163|gb|ESQ39527.1| hypothetical protein
EUTSA_v10001103mg [Eutrema salsugineum]
Length = 1135
Score = 114 bits (285), Expect = 1e-23
Identities = 54/104 (51%), Positives = 74/104 (71%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V S+KF C + +TE EQ+++L+ P L W GYTHLHFGVVR+ LTLH R +LV+
Sbjct: 88 VQSSKFSSCQVPATEEEQFISLNIPENLRRLWQQQGYTHLHFGVVRIGLTLHARKGLLVI 147
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
AR+AL+D+ Y+Q+ IG V TTLN+GTV T+ +FN+SL+D
Sbjct: 148 ARIALVDSRLKSYQQACIGTVQTTLNAGTVFVTLFLNFNVSLQD 191
>ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Populus trichocarpa]
gi|222856725|gb|EEE94272.1| hypothetical protein
POPTR_0005s18370g [Populus trichocarpa]
Length = 667
Score = 110 bits (276), Expect = 2e-22
Identities = 51/104 (49%), Positives = 74/104 (71%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ++ FD+ + +T EQ+VTL PSE + W+ GYTH+HFG +RLAL+ HG+ + V
Sbjct: 92 VQASSFDQHKIPATSREQFVTLEIPSEFLGQWISQGYTHIHFGAIRLALSYHGQKGLPVA 151
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
AR+ALLDT +L Y+ + IG++ TTLN GTV+ T P+FN++L D
Sbjct: 152 ARLALLDTRYLEYQHACIGSLETTLNCGTVVVTFYPNFNMALDD 195
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 108 bits (271), Expect = 6e-22
Identities = 51/104 (49%), Positives = 74/104 (71%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V S++ D+C L+ T EQYV L P LI W GYT LHFGVV L L+LHGR + V
Sbjct: 84 VQSSQLDQCSLRVTNQEQYVDLEIPQNLINHWKNEGYTALHFGVVGLILSLHGRKNLPVF 143
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
++ALLD+++L YE ++IG ++T+L++G+V+ TI P++N+SL D
Sbjct: 144 CKIALLDSSYLHYENAVIGTILTSLHAGSVVLTIFPNYNVSLND 187
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 108 bits (271), Expect = 6e-22
Identities = 51/108 (47%), Positives = 74/108 (68%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V S++ D+C L++ EQYV L P LI W GY LHFG VRL L+LHGR + V
Sbjct: 84 VQSSRLDQCSLRAINQEQYVDLEIPQSLINHWKSEGYIALHFGAVRLILSLHGRKNLPVF 143
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKDLKTP 2
++ALLD+++L YE ++IG V+T+L++G+V+ TI P++N+SL D P
Sbjct: 144 CKIALLDSSYLHYENAVIGTVLTSLHAGSVVLTIFPNYNVSLNDSTLP 191
>ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627366 [Citrus sinensis]
Length = 345
Score = 106 bits (264), Expect = 4e-21
Identities = 50/90 (55%), Positives = 68/90 (75%)
Frame = -3
Query: 289 STEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVVARVALLDTNFL* 110
+T++EQYVTL P++L+ W GYTHLH G VRL TLHGR ++ V AR+ALLDT F
Sbjct: 112 TTQSEQYVTLEIPTDLVSHWKREGYTHLHLGGVRLIRTLHGRKRLPVTARLALLDTRFKE 171
Query: 109 YEQSLIGNVVTTLNSGTVLFTIAPDFNISL 20
Y+ ++IG V+TTL++G+VL T P+FN+SL
Sbjct: 172 YQHAVIGTVLTTLHAGSVLLTFYPNFNLSL 201
>ref|XP_004508246.1| PREDICTED: probable flavin-containing monooxygenase 1-like [Cicer
arietinum]
Length = 769
Score = 105 bits (263), Expect = 5e-21
Identities = 50/101 (49%), Positives = 71/101 (70%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V S++ D+C L++T EQYV L P LI W GYT LHFG VRL L+LHGR V V
Sbjct: 84 VQSSRLDQCSLRATNQEQYVDLEIPQSLINHWKSEGYTALHFGAVRLILSLHGRKNVPVF 143
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNIS 23
++ LLD+++L YE ++IG V+T+L++G+V+ TI P++N S
Sbjct: 144 CKITLLDSSYLHYENTVIGTVLTSLHAGSVVLTIFPNYNWS 184
>ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutrema salsugineum]
gi|557099114|gb|ESQ39485.1| hypothetical protein
EUTSA_v10001266mg [Eutrema salsugineum]
Length = 492
Score = 104 bits (260), Expect = 1e-20
Identities = 49/104 (47%), Positives = 73/104 (70%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+L+++ ++ + +TE +Q + L F ++ W GYTHLH+G +RLALTLHGR + VV
Sbjct: 73 ILASQMEQHLVPATETKQMIPLRFNEGMVHQWKTHGYTHLHYGAIRLALTLHGRKDLPVV 132
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
ARVALLDT + Y+ + I + TTL++GTV T+ P+FNISL+D
Sbjct: 133 ARVALLDTRYREYQHACIATIQTTLDAGTVFVTLYPNFNISLED 176
>ref|XP_006478654.1| PREDICTED: uncharacterized protein LOC102625625 [Citrus sinensis]
Length = 287
Score = 101 bits (251), Expect = 1e-19
Identities = 46/89 (51%), Positives = 68/89 (76%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+ S++ D+CDL+++++EQYVTL P++L+ +W GYT+LH G VRL LTLHGR + V
Sbjct: 90 IQSSRLDQCDLQASQSEQYVTLEIPTDLVTNWKREGYTYLHLGGVRLILTLHGRKGLPVT 149
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGT 59
AR+ALLDT F Y+ ++IG V+TTL+ G+
Sbjct: 150 ARIALLDTKFKQYQHAVIGTVLTTLHVGS 178
>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
gi|222860472|gb|EEE98019.1| hypothetical protein
POPTR_0011s07150g [Populus trichocarpa]
Length = 950
Score = 101 bits (251), Expect = 1e-19
Identities = 47/104 (45%), Positives = 72/104 (69%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ++ FD+ + +T EQ+VTL P+E W+ GYTH++FG +RLAL+ HGR + V
Sbjct: 43 VQASSFDQHKIPATSKEQFVTLEIPTEFPGQWISQGYTHIYFGAIRLALSYHGRKGLPVA 102
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
A++ALLDT +L Y+ + IG++ TTL+ G V+ T P+FN++L D
Sbjct: 103 AQLALLDTRYLEYQHACIGSLKTTLDCGMVVVTFYPNFNMALDD 146
>ref|XP_006408745.1| hypothetical protein EUTSA_v10002304mg, partial [Eutrema
salsugineum] gi|557109901|gb|ESQ50198.1| hypothetical
protein EUTSA_v10002304mg, partial [Eutrema salsugineum]
Length = 194
Score = 100 bits (250), Expect = 2e-19
Identities = 47/106 (44%), Positives = 72/106 (67%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+L+++ ++ + +TE EQ + L F ++ W GYTHLH+ +RLAL+LHGR +L V
Sbjct: 73 ILASQMEQHLVPATEIEQMIPLRFNEGMVHQWKTHGYTHLHYRAIRLALSLHGRKSLLGV 132
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKDLK 8
ARVALLDT + Y+ + + TTLN+GT+ T+ P+FNI L+DL+
Sbjct: 133 ARVALLDTRYKEYQHACKATIQTTLNAGTIFVTLYPNFNIDLEDLQ 178
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 100 bits (250), Expect = 2e-19
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ++K D+ + +T EQ+VTLH P E W +TH+HFG V++ALT HGR VV
Sbjct: 87 VAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVV 146
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
AR+ALLDT +L Y+ + +G TLN+GTV T+ P+F +SL D
Sbjct: 147 ARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSD 190
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 100 bits (250), Expect = 2e-19
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ++K D+ + +T EQ+VTLH P E W +TH+HFG V++ALT HGR VV
Sbjct: 87 VAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVV 146
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
AR+ALLDT +L Y+ + +G TLN+GTV T+ P+F +SL D
Sbjct: 147 ARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSD 190
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 100 bits (250), Expect = 2e-19
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ++K D+ + +T EQ+VTLH P E W +TH+HFG V++ALT HGR VV
Sbjct: 86 VAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVV 145
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
AR+ALLDT +L Y+ + +G TLN+GTV T+ P+F +SL D
Sbjct: 146 ARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSD 189
>ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobroma cacao]
gi|508773464|gb|EOY20720.1| Uncharacterized protein
TCM_012065 [Theobroma cacao]
Length = 280
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/104 (45%), Positives = 70/104 (67%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
+ ST+FD+ ++ +AEQ+VTL P E W+ GY+H+HFG VRLAL HGR VV
Sbjct: 84 IQSTRFDEHFIQGDQAEQFVTLQIPLEFPQQWIHHGYSHIHFGAVRLALNYHGREGQSVV 143
Query: 145 ARVALLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
A +ALLD+ ++ YE + IG V TLN+ T++ T+ P++ ++L D
Sbjct: 144 AHMALLDSRYIKYEHACIGTVEDTLNTKTLIVTLFPNYTMALCD 187
>ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Populus trichocarpa]
gi|550330770|gb|ERP56730.1| hypothetical protein
POPTR_0009s00900g [Populus trichocarpa]
Length = 335
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
Frame = -3
Query: 325 VLSTKFDKCDLKSTEAEQYVTLHFPSELIPSWLVVGYTHLHFGVVRLALTLHGRSKVLVV 146
V ++ FD+ + +T E +VTL P+E W+ GYTH+HF +RLAL+ HGR + V
Sbjct: 92 VQASSFDQHKIPATSREHFVTLEIPTEFPGQWISQGYTHIHFCAIRLALSYHGRKGLPVA 151
Query: 145 ARVA-------LLDTNFL*YEQSLIGNVVTTLNSGTVLFTIAPDFNISLKD 14
AR+A LLDT +L Y+ + IG++ TTLN GTV+ T P+FN++L D
Sbjct: 152 ARLALLDTRYPLLDTRYLEYQHACIGSLQTTLNCGTVVVTFYPNFNMALDD 202