BLASTX nr result
ID: Cocculus23_contig00050490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00050490
(320 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300... 92 2e-30
emb|CAE02904.3| OSJNBb0045P24.9 [Oryza sativa Japonica Group] 91 3e-29
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina... 89 4e-29
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 88 8e-29
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 86 2e-28
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 86 2e-28
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 90 2e-28
gb|ABO21746.1| gag-pol polyprotein [Panicum virgatum] 88 2e-28
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun... 89 3e-28
ref|XP_007203327.1| hypothetical protein PRUPE_ppa020104mg, part... 87 3e-28
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 86 4e-28
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 86 4e-28
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 86 4e-28
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 89 4e-28
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 89 4e-28
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 87 6e-28
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera] 86 6e-28
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 86 8e-28
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 86 8e-28
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 86 8e-28
>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
subsp. vesca]
Length = 1034
Score = 92.0 bits (227), Expect(2) = 2e-30
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
SNAP+ FMRV NQV +P+IG CVVVYFDD+LIYS HLQHL+KVL +L+ + Y
Sbjct: 790 SNAPSTFMRVMNQVLKPYIGTCVVVYFDDILIYSKSKEEHLQHLRKVLEVLQENKLYVNL 849
Query: 285 KKCIFCTDHVLF 320
KKC F T +LF
Sbjct: 850 KKCSFMTKKLLF 861
Score = 65.9 bits (159), Expect(2) = 2e-30
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIRI LGDEWKT FK++DGLYEWL+MPFG P+
Sbjct: 755 RSGYHQIRIKLGDEWKTAFKSKDGLYEWLVMPFGLSNAPS 794
>emb|CAE02904.3| OSJNBb0045P24.9 [Oryza sativa Japonica Group]
Length = 1361
Score = 90.9 bits (224), Expect(2) = 3e-29
Identities = 42/72 (58%), Positives = 53/72 (73%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIGR VVVYFDD+LIYS L H+ HL+ V + LR A +A
Sbjct: 899 TNAPSTFMRLMNEVVRPFIGRFVVVYFDDILIYSKSLDEHMDHLRVVFNALRDALLFANL 958
Query: 285 KKCIFCTDHVLF 320
KKCIFCT+ V F
Sbjct: 959 KKCIFCTERVSF 970
Score = 63.2 bits (152), Expect(2) = 3e-29
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 864 RSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPS 903
>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
Length = 358
Score = 88.6 bits (218), Expect(2) = 4e-29
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMRV QV +PF+G+ +VVYFDD+LIYS L H+ HL +V LR + +A P
Sbjct: 76 TNAPSTFMRVMTQVLRPFMGKFLVVYFDDILIYSKSLEHHIDHLSQVCLTLRKEKLFANP 135
Query: 285 KKCIFCTDHVLF 320
KKC+F TD V+F
Sbjct: 136 KKCVFMTDQVIF 147
Score = 65.5 bits (158), Expect(2) = 4e-29
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
KSGY QIRI GDEWKT FKT+DGLYEW++MPFG P+
Sbjct: 41 KSGYHQIRIRPGDEWKTAFKTKDGLYEWMVMPFGLTNAPS 80
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 87.8 bits (216), Expect(2) = 8e-29
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 939 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 998
Query: 285 KKCIFCTDHVLF 320
KKC FCTD V F
Sbjct: 999 KKCTFCTDRVSF 1010
Score = 65.1 bits (157), Expect(2) = 8e-29
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKTTFKT+ GLYEWL+MPFG P+
Sbjct: 904 RSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPS 943
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 86.3 bits (212), Expect(2) = 2e-28
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 1187 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 1246
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 1247 EKCTFCTDRVSF 1258
Score = 65.1 bits (157), Expect(2) = 2e-28
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKTTFKT+ GLYEWL+MPFG P+
Sbjct: 1152 RSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPS 1191
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 86.3 bits (212), Expect(2) = 2e-28
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 1178 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 1237
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 1238 EKCTFCTDRVSF 1249
Score = 65.1 bits (157), Expect(2) = 2e-28
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKTTFKT+ GLYEWL+MPFG P+
Sbjct: 1143 RSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPS 1182
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 89.7 bits (221), Expect(2) = 2e-28
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
SNAP+ FMR+ NQV +PFIG VVVYFDD+LIYS HL HL++VL +LR + Y
Sbjct: 761 SNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLYVNL 820
Query: 285 KKCIFCTDHVLF 320
KKC FCT+ +LF
Sbjct: 821 KKCTFCTNKLLF 832
Score = 61.6 bits (148), Expect(2) = 2e-28
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIRI GDEWKT FK++DGL+EWL+MPFG P+
Sbjct: 726 RSGYHQIRIRPGDEWKTAFKSKDGLFEWLVMPFGLSNAPS 765
>gb|ABO21746.1| gag-pol polyprotein [Panicum virgatum]
Length = 276
Score = 88.2 bits (217), Expect(2) = 2e-28
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V + FIG+ VVVYFDD+LIYS HL HL+ V LR+A YA
Sbjct: 48 TNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSHEEHLDHLRAVFDALRAASLYANL 107
Query: 285 KKCIFCTDHVLF 320
+KCIFCTD V F
Sbjct: 108 EKCIFCTDRVAF 119
Score = 63.2 bits (152), Expect(2) = 2e-28
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 13 RSGYHQIRMKLGDEWKTAFKTKVGLYEWLVMPFGLTNAPS 52
>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
gi|462417202|gb|EMJ21939.1| hypothetical protein
PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 89.4 bits (220), Expect(2) = 3e-28
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
SNAP+ FMR+ NQV +PFIG VVVYFDD+LIYS HL HL++VL +LR + Y
Sbjct: 743 SNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLYMNL 802
Query: 285 KKCIFCTDHVLF 320
KKC FCT+ +LF
Sbjct: 803 KKCTFCTNKLLF 814
Score = 61.6 bits (148), Expect(2) = 3e-28
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIRI GDEWKT FK++DGL+EWL+MPFG P+
Sbjct: 708 RSGYHQIRIRPGDEWKTAFKSKDGLFEWLVMPFGLSNAPS 747
>ref|XP_007203327.1| hypothetical protein PRUPE_ppa020104mg, partial [Prunus persica]
gi|462398858|gb|EMJ04526.1| hypothetical protein
PRUPE_ppa020104mg, partial [Prunus persica]
Length = 428
Score = 86.7 bits (213), Expect(2) = 3e-28
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+N P+ FMR+ NQVF+PFIG+ VVVYFDD+L+YS + H++HL+++ +LR Q A
Sbjct: 71 TNVPSTFMRLMNQVFRPFIGKFVVVYFDDILVYSHNAVQHMEHLRQIFEVLREQQLSANL 130
Query: 285 KKCIFCTDHVLF 320
KKC F TD ++F
Sbjct: 131 KKCEFLTDSLIF 142
Score = 64.3 bits (155), Expect(2) = 3e-28
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ GDEWKT FKTRDGL+EWL+MPFG +P+
Sbjct: 36 RSGYHQIRMRPGDEWKTAFKTRDGLFEWLVMPFGLTNVPS 75
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 85.5 bits (210), Expect(2) = 4e-28
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V + FIGR VVVYFDD+LIYS L HL+HL+ V LR A+ +
Sbjct: 889 TNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFGNL 948
Query: 285 KKCIFCTDHVLF 320
KC FCTD V F
Sbjct: 949 GKCTFCTDRVSF 960
Score = 65.1 bits (157), Expect(2) = 4e-28
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKTTFKT+ GLYEWL+MPFG P+
Sbjct: 854 RSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPS 893
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 85.9 bits (211), Expect(2) = 4e-28
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 768 TNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 827
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 828 EKCTFCTDRVSF 839
Score = 64.7 bits (156), Expect(2) = 4e-28
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG PT
Sbjct: 733 RSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPT 772
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 85.9 bits (211), Expect(2) = 4e-28
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 768 TNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 827
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 828 EKCTFCTDRVSF 839
Score = 64.7 bits (156), Expect(2) = 4e-28
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG PT
Sbjct: 733 RSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPT 772
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 88.6 bits (218), Expect(2) = 4e-28
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N VF+ F G+ +VVYFDD+LI+S +L HL+HL+KV +LR+ + +A
Sbjct: 828 TNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANL 887
Query: 285 KKCIFCTDHVLF 320
KKC FC D V+F
Sbjct: 888 KKCTFCVDRVVF 899
Score = 62.0 bits (149), Expect(2) = 4e-28
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
KSGY QIR+ GDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 793 KSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPS 832
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 88.6 bits (218), Expect(2) = 4e-28
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N VF+ F G+ +VVYFDD+LI+S +L HL+HL+KV +LR+ + +A
Sbjct: 828 TNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANL 887
Query: 285 KKCIFCTDHVLF 320
KKC FC D V+F
Sbjct: 888 KKCTFCVDRVVF 899
Score = 62.0 bits (149), Expect(2) = 4e-28
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
KSGY QIR+ GDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 793 KSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPS 832
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 86.7 bits (213), Expect(2) = 6e-28
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H +HL+ V + LR A+ +
Sbjct: 790 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFKHLRAVFNALRDARLFGNL 849
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 850 EKCTFCTDRVSF 861
Score = 63.2 bits (152), Expect(2) = 6e-28
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 755 RSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPS 794
>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
Length = 771
Score = 86.3 bits (212), Expect(2) = 6e-28
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N + FIGR VVVYFDD+L+YS +L H+ HL VL +LR + YA
Sbjct: 232 TNAPSTFMRLMNHALRSFIGRFVVVYFDDILVYSKNLDEHINHLHCVLDVLRKXKLYANL 291
Query: 285 KKCIFCTDHVLF 320
KKC FC D V+F
Sbjct: 292 KKCSFCMDKVVF 303
Score = 63.5 bits (153), Expect(2) = 6e-28
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
KSGY QIR+ GDEWKTTFKT+ GLYEWL+MPFG P+
Sbjct: 197 KSGYHQIRMKEGDEWKTTFKTKYGLYEWLVMPFGLTNAPS 236
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 86.3 bits (212), Expect(2) = 8e-28
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 845 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 904
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 905 EKCTFCTDRVSF 916
Score = 63.2 bits (152), Expect(2) = 8e-28
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 810 RSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPS 849
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP FM + N+VF ++ + VVV+ DD+L+YS H HL+ VL LR Q YA
Sbjct: 1637 TNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKL 1696
Query: 285 KKCIFCTDHVLF 320
KC F V F
Sbjct: 1697 SKCEFWLSEVKF 1708
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 86.3 bits (212), Expect(2) = 8e-28
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 681 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 740
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 741 EKCTFCTDRVSF 752
Score = 63.2 bits (152), Expect(2) = 8e-28
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 646 RSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPS 685
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 86.3 bits (212), Expect(2) = 8e-28
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 105 SNAPNAFMRVRNQVFQPFIGRCVVVYFDDLLIYSMDLTSHLQHLQKVLSILRSAQFYAAP 284
+NAP+ FMR+ N+V +PFIG+ VVVYFDD+LIYS + H HL+ V + LR A+ +
Sbjct: 209 TNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNL 268
Query: 285 KKCIFCTDHVLF 320
+KC FCTD V F
Sbjct: 269 EKCTFCTDRVSF 280
Score = 63.2 bits (152), Expect(2) = 8e-28
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KSGYRQIRI*LGDEWKTTFKTRDGLYEWLMMPFGYLMLPT 120
+SGY QIR+ LGDEWKT FKT+ GLYEWL+MPFG P+
Sbjct: 174 RSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPS 213