BLASTX nr result

ID: Cocculus23_contig00050386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00050386
         (431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40065.1| unknown [Medicago truncatula]                           56   6e-06
ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|...    56   6e-06

>gb|AFK40065.1| unknown [Medicago truncatula]
          Length = 479

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = -1

Query: 419 FVTFMEVWVMKEYGVKESWTKIYSINHKKTNLSRTQKTKSYMF*DTIKYFGE*CWNSVFA 240
           F++ + +WVM EYG+ ESWTKIY+I+     L R    + Y     IK+F E    ++ +
Sbjct: 345 FISNVSMWVMNEYGIGESWTKIYNIDTSFNPLDRV--PRGYGLSWPIKHFEE--GAAILS 400

Query: 239 INSTS-LALYEAEGNRFRSFKVHDVKMEIRHIVTYVESLALLDENKEG 99
            +S++    YE E   F+ F++H  ++    ++ ++ SL  L +  +G
Sbjct: 401 YHSSNCFTYYEPEKYGFKVFRIHGSRINYFEVIPHIPSLISLKDVLKG 448


>ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|AES95109.1| F-box
           [Medicago truncatula]
          Length = 480

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = -1

Query: 419 FVTFMEVWVMKEYGVKESWTKIYSINHKKTNLSRTQKTKSYMF*DTIKYFGE*CWNSVFA 240
           F++ + +WVM EYG+ ESWTKIY+I+     L R    + Y     IK+F E    ++ +
Sbjct: 345 FISNVSMWVMNEYGIGESWTKIYNIDTSFNPLDRV--PRGYGLSWPIKHFEE--GAAILS 400

Query: 239 INSTS-LALYEAEGNRFRSFKVHDVKMEIRHIVTYVESLALLDENKEG 99
            +S++    YE E   F+ F++H  ++    ++ ++ SL  L +  +G
Sbjct: 401 YHSSNCFTYYEPEKYGFKVFRIHGSRINYFEVIPHIPSLISLKDVLKG 448


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