BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00050130
         (268 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008937858.1| protein of unknown function [Magnetospirillu...    87   3e-17
ref|YP_005415573.1| hypothetical protein RSPPHO_03264, partial [...    83   3e-14
ref|WP_002430991.1| conserved hypothetical protein [Escherichia ...    80   2e-13
ref|WP_021418657.1| hypothetical protein [Peptoclostridium diffi...    77   3e-12
ref|WP_021399582.1| hypothetical protein [Peptoclostridium diffi...    77   3e-12
ref|WP_023062893.1| hypothetical protein [Clostridium thermocell...    72   1e-10
ref|WP_004923043.1| hypothetical protein [Providencia stuartii] ...    69   5e-10
ref|WP_009018806.1| conserved hypothetical protein, partial [Par...    69   9e-10
ref|WP_004247155.1| hypothetical protein [Proteus mirabilis] gi|...    69   9e-10
ref|WP_021497686.1| hypothetical protein [Escherichia coli] gi|5...    67   2e-09
ref|WP_007285192.1| hypothetical protein [[Clostridium] bartlett...    67   3e-09
ref|WP_003424985.1| hypothetical protein, partial [Peptoclostrid...    66   4e-09
ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacil...    65   1e-08
gb|AFJ95810.1| hypothetical protein, partial [uncultured bacterium]    63   5e-08
ref|WP_001894030.1| hypothetical protein [Vibrio cholerae] gi|12...    62   6e-08
ref|WP_006574932.1| hypothetical protein [Pseudoflavonifractor c...    60   2e-07
gb|ADI18655.1| hypothetical protein [uncultured Acidobacteria ba...    60   2e-07
ref|WP_001417675.1| hypothetical protein [Escherichia coli] gi|3...    54   5e-07
ref|WP_001808737.1| hypothetical protein [Streptococcus pneumoniae]    59   7e-07
ref|WP_009569271.1| hypothetical protein [Streptococcus intermed...    58   1e-06

>ref|YP_008937858.1| protein of unknown function [Magnetospirillum gryphiswaldense MSR-1
           v2] gi|568205844|ref|WP_024080208.1| hypothetical
           protein [Magnetospirillum gryphiswaldense]
           gi|78033430|emb|CAJ30045.1| conserved hypothetical
           protein [Magnetospirillum gryphiswaldense MSR-1]
           gi|566555979|emb|CDK99198.1| protein of unknown function
           [Magnetospirillum gryphiswaldense MSR-1 v2]
          Length = 259

 Score = 86.7 bits (213), Expect(2) = 3e-17
 Identities = 41/61 (67%), Positives = 45/61 (73%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYASPIR 192
           +AFHP PQ+I  FFN   FGPPV VT PSTCPWID  VSGL  AT+RPI+TRFR A   R
Sbjct: 1   MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSGLMHATRRPIQTRFRCAYTYR 60

Query: 193 L 195
           L
Sbjct: 61  L 61



 Score = 27.3 bits (59), Expect(2) = 3e-17
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 186 YSVKLATENKPLTHYKKGTHSQNK 257
           Y +KLA     LTHY KGT S  K
Sbjct: 59  YRLKLAAYTNSLTHYTKGTPSPFK 82


>ref|YP_005415573.1| hypothetical protein RSPPHO_03264, partial [Rhodospirillum
           photometricum DSM 122] gi|504226142|ref|WP_014413244.1|
           hypothetical protein, partial [Rhodospirillum
           photometricum] gi|378401487|emb|CCG06603.1| unnamed
           protein product, partial [Rhodospirillum photometricum
           DSM 122]
          Length = 114

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/76 (57%), Positives = 49/76 (64%)
 Frame = +1

Query: 31  PQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYASPIRLSSPQK 210
           PQVI  FFN   FGPPV VT PSTCPW+D PVSGL   T+RP+KTRFR AS  RL   ++
Sbjct: 1   PQVIPVFFNRRGFGPPVGVTPPSTCPWLDHPVSGLIRRTRRPLKTRFRCASTYRLKLARQ 60

Query: 211 ISR*PIIKKVRTHRTK 258
           I       K  TH TK
Sbjct: 61  I-------KSLTHYTK 69


>ref|WP_002430991.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
           gi|226903374|gb|EEH89633.1| hypothetical protein
           ESAG_07158 [Escherichia sp. 3_2_53FAA]
          Length = 66

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   SRFDWPFTPSHKSSANFSTLVGSVLQLVLPNLQPAHG 112
           SRFDWPFTPSHKSSANFSTLVGSVLQLVLPNLQPAHG
Sbjct: 30  SRFDWPFTPSHKSSANFSTLVGSVLQLVLPNLQPAHG 66


>ref|WP_021418657.1| hypothetical protein [Peptoclostridium difficile]
           gi|531648059|gb|EQJ26087.1| hypothetical protein
           QS5_0359 [Clostridium difficile P15]
           gi|531719306|gb|EQJ96212.1| hypothetical protein
           QUA_0359 [Clostridium difficile P49]
           gi|531719763|gb|EQJ96666.1| hypothetical protein
           QUA_0130 [Clostridium difficile P49]
           gi|531720034|gb|EQJ96934.1| hypothetical protein
           QUA_0121 [Clostridium difficile P49]
           gi|548664239|gb|ERM33690.1| hypothetical protein
           QUO_3590 [Clostridium difficile P64]
           gi|548670973|gb|ERM40316.1| hypothetical protein
           QUO_0144 [Clostridium difficile P64]
           gi|548671083|gb|ERM40423.1| hypothetical protein
           QUO_0136 [Clostridium difficile P64]
          Length = 144

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYASPIR 192
           L FH  PQVI   FN   FGPP + T  S+C W+ RPVSGL   T+R +KTRFRY S ++
Sbjct: 27  LEFHRYPQVIPELFNARGFGPPRNFTFASSCSWVGRPVSGLRQVTERSVKTRFRYGSHLK 86

Query: 193 -LSSPQKISR*PIIKKVRTH 249
            L+    ++R P+++KVR H
Sbjct: 87  CLTLLLNVTRWPVLQKVRGH 106


>ref|WP_021399582.1| hypothetical protein [Peptoclostridium difficile]
           gi|531382562|gb|EQG74591.1| hypothetical protein
           QKA_3524 [Clostridium difficile DA00165]
           gi|531641939|gb|EQJ20122.1| hypothetical protein
           QS3_0132 [Clostridium difficile P13]
           gi|531708916|gb|EQJ85959.1| hypothetical protein
           QU7_0117 [Clostridium difficile P46]
           gi|548681502|gb|ERM50695.1| hypothetical protein
           QUG_0137 [Clostridium difficile P53]
           gi|548683161|gb|ERM52323.1| hypothetical protein
           QUQ_0118 [Clostridium difficile P68]
          Length = 152

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYASPIR 192
           L FH  PQVI   FN   FGPP + T  S+C W+ RPVSGL   T+R +KTRFRY S ++
Sbjct: 35  LEFHRYPQVIPELFNARGFGPPRNFTFASSCSWVGRPVSGLRQVTERSVKTRFRYGSHLK 94

Query: 193 -LSSPQKISR*PIIKKVRTH 249
            L+    ++R P+++KVR H
Sbjct: 95  CLTLLLNVTRWPVLQKVRGH 114


>ref|WP_023062893.1| hypothetical protein [Clostridium thermocellum]
           gi|551232768|emb|CDG37541.1| hypothetical protein
           CTHBC1_2972 [Clostridium thermocellum BC1]
          Length = 157

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/79 (53%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYAS-PI 189
           L F   PQ+I   FN   FGPP   T  STCPWI  PVSGL  AT RPIKTRF + S P 
Sbjct: 69  LEFLRYPQLIPNLFNGYGFGPPRDFTLASTCPWIGHPVSGLLHATCRPIKTRFPFGSVPY 128

Query: 190 R-LSSPQKISR*PIIKKVR 243
             L+SP  I+R  +++KVR
Sbjct: 129 EYLTSPHTITRRTVLQKVR 147


>ref|WP_004923043.1| hypothetical protein [Providencia stuartii]
          gi|188022873|gb|EDU60913.1| hypothetical protein
          PROSTU_01098 [Providencia stuartii ATCC 25827]
          Length = 41

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -2

Query: 93 LGNTNWRTEPTNVEKLADDLWLGVKGQSNRE 1
          +GNTNWRTEPTNVEKLADDLWLGVKGQSNRE
Sbjct: 1  MGNTNWRTEPTNVEKLADDLWLGVKGQSNRE 31


>ref|WP_009018806.1| conserved hypothetical protein, partial [Parabacteroides sp. D13]
           gi|256735710|gb|EEU49048.1| LOW QUALITY PROTEIN:
           hypothetical protein HMPREF0619_04489, partial
           [Parabacteroides sp. D13]
          Length = 59

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/57 (59%), Positives = 39/57 (68%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYAS 183
           LAFHP PQ+I   FN    GPPV VTQPST P +D  VS L P T RP++TRFR+ S
Sbjct: 1   LAFHPYPQLIGKLFNAYPSGPPVGVTQPSTWPRVDHSVSRLPPPTWRPVQTRFRFGS 57


>ref|WP_004247155.1| hypothetical protein [Proteus mirabilis]
          gi|227161375|gb|EEI46427.1| hypothetical protein
          HMPREF0693_3633 [Proteus mirabilis ATCC 29906]
          Length = 41

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = -2

Query: 93 LGNTNWRTEPTNVEKLADDLWLGVKGQSNRE 1
          +GNTNWRTEPTNVEKLADDLW+GVKGQSNRE
Sbjct: 1  MGNTNWRTEPTNVEKLADDLWMGVKGQSNRE 31


>ref|WP_021497686.1| hypothetical protein [Escherichia coli]
          gi|536797347|gb|ERB82501.1| hypothetical protein
          S11_4511 [Escherichia coli B26-1]
          Length = 40

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -2

Query: 93 LGNTNWRTEPTNVEKLADDLWLGVKGQSNR 4
          +GNTNWRTEPTNVEKLADDLWLGVKGQSNR
Sbjct: 1  MGNTNWRTEPTNVEKLADDLWLGVKGQSNR 30


>ref|WP_007285192.1| hypothetical protein [[Clostridium] bartlettii]
           gi|164603822|gb|EDQ97287.1| hypothetical protein
           CLOBAR_00774 [Clostridium bartlettii DSM 16795]
           gi|164604020|gb|EDQ97485.1| hypothetical protein
           CLOBAR_00537 [Clostridium bartlettii DSM 16795]
          Length = 85

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/57 (59%), Positives = 36/57 (63%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYAS 183
           L FH  PQVI   FN+  FGPP + T  STC WI R VSGL   T RP KTRFRY S
Sbjct: 27  LEFHRYPQVIPALFNVRGFGPPRNFTFASTCSWIGRLVSGLRRVTGRPFKTRFRYGS 83


>ref|WP_003424985.1| hypothetical protein, partial [Peptoclostridium difficile]
           gi|296428383|gb|EFH14271.1| hypothetical protein
           HMPREF0219_3097, partial [Peptoclostridium difficile
           NAP07]
          Length = 57

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYAS 183
           + FH  PQVI   FN   FGPP + T  S+C W+ RPVSGL   T+R +KTRFRY S
Sbjct: 1   MEFHRYPQVIPELFNARGFGPPRNFTFASSCSWVGRPVSGLRQVTERSVKTRFRYGS 57


>ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacillus crispatus ST1]
           gi|295692304|ref|YP_003600914.1| hypothetical protein
           LCRIS_00442 [Lactobacillus crispatus ST1]
           gi|295692317|ref|YP_003600927.1| hypothetical protein
           LCRIS_00455 [Lactobacillus crispatus ST1]
           gi|295693512|ref|YP_003602122.1| hypothetical protein
           LCRIS_01650 [Lactobacillus crispatus ST1]
           gi|502850660|ref|WP_013085636.1| hypothetical protein
           [Lactobacillus crispatus] gi|295030031|emb|CBL49510.1|
           conserved protein [Lactobacillus crispatus ST1]
           gi|295030410|emb|CBL49889.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030423|emb|CBL49902.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295031618|emb|CBL51097.1| conserved protein
           [Lactobacillus crispatus ST1]
          Length = 156

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   LPV*LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYA 180
           L V L FH  PQ+I   FN+  FGPPV  T PS   W+   VSGL   T RPIKTRFR  
Sbjct: 65  LQVRLEFHRYPQLIPAIFNLRGFGPPVRFTTPSAWSWVGHLVSGLRHLTFRPIKTRFRSG 124

Query: 181 SPIR-LSSPQKISR*PIIKKVR 243
           S    L+S   ++R  I++K R
Sbjct: 125 SVFSDLTSLDNVTRRFILQKAR 146


>gb|AFJ95810.1| hypothetical protein, partial [uncultured bacterium]
          Length = 113

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/70 (52%), Positives = 41/70 (58%)
 Frame = +3

Query: 39  HPLIFQH*SVRSSS*CYPTFNLPMDRSPGFGSIPSN*TPY*DSLSLRLPYSVKLATENKP 218
           HP  FQ   VR S+  YP F+LPMD SPGF S   + TP  DSLSLRL   + LAT    
Sbjct: 2   HPPSFQPRWVRPSTGSYPRFSLPMDSSPGFASAARDSTPCSDSLSLRLASWLGLATRRNS 61

Query: 219 LTHYKKGTHS 248
           L H  KGT S
Sbjct: 62  LAHSTKGTPS 71


>ref|WP_001894030.1| hypothetical protein [Vibrio cholerae]
          gi|124113458|gb|EAY32278.1| hypothetical protein
          A55_B0061 [Vibrio cholerae 1587]
          Length = 41

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = -2

Query: 93 LGNTNWRTEPTNVEKLADDLWLGVKGQSNRE 1
          + N NWRTEPTNVEKLADDLWLGVKGQSN E
Sbjct: 1  MSNINWRTEPTNVEKLADDLWLGVKGQSNSE 31


>ref|WP_006574932.1| hypothetical protein [Pseudoflavonifractor capillosus]
           gi|150270404|gb|EDM97727.1| hypothetical protein
           BACCAP_04468 [Pseudoflavonifractor capillosus ATCC
           29799]
          Length = 89

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRPIKTRFRYASPI- 189
           + FH  PQVI    N   FGPP   T  STCPWI  PVSGL P T   + T    + P+ 
Sbjct: 1   MEFHRYPQVIADHCNGRAFGPPWGFTPTSTCPWIGHPVSGLLPLTSYALFTLGFPSPPVL 60

Query: 190 -RLSSPQKISR*PIIKKVRTH 249
             LS P  I+R  I++KV  H
Sbjct: 61  NTLSLPVTITRRTILQKVPHH 81


>gb|ADI18655.1| hypothetical protein [uncultured Acidobacteria bacterium
           HF4000_26D02]
          Length = 61

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 38/58 (65%)
 Frame = +3

Query: 9   LIGLSPPATSHPLIFQH*SVRSSS*CYPTFNLPMDRSPGFGSIPSN*TPY*DSLSLRL 182
           +I LSP  ++HP  FQ   VR+S+ CYP F L   RSP F S P + TPY DSLSLRL
Sbjct: 1   MISLSPLPSAHPSRFQPTLVRASTWCYPRFTLAKGRSPRFASTPGDCTPYSDSLSLRL 58


>ref|WP_001417675.1| hypothetical protein [Escherichia coli]
          gi|377952147|gb|EHV15748.1| hypothetical protein
          ECDEC4F_5658 [Escherichia coli DEC4F]
          Length = 40

 Score = 53.9 bits (128), Expect(2) = 5e-07
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -2

Query: 93 LGNTNWRTEPTNVEKLADDLWLG 25
          +GNTNWRTEPTNVEKLADDLWLG
Sbjct: 1  MGNTNWRTEPTNVEKLADDLWLG 23



 Score = 25.4 bits (54), Expect(2) = 5e-07
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 52 KISG*LVAGGERPIKPG 2
          K++  L  GGERPIKPG
Sbjct: 15 KLADDLWLGGERPIKPG 31


>ref|WP_001808737.1| hypothetical protein [Streptococcus pneumoniae]
          Length = 88

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
 Frame = +1

Query: 13  LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRP----IKTRFRYA 180
           + F   PQVI+  FN+  FGPPV +T PSTC W+   VSGL   TK P    +  R R  
Sbjct: 1   MEFLRYPQVIQALFNVPWFGPPVRLTAPSTCSWVGHMVSGLRHDTKAPYSDSVSLRLRL- 59

Query: 181 SPIRLSSPQKISR*PIIKKVRTH 249
               L+S   ++R  I++K R+H
Sbjct: 60  --FNLTSHHNVTRRFILQKARSH 80


>ref|WP_009569271.1| hypothetical protein [Streptococcus intermedius]
           gi|422112921|gb|EKU16681.1| hypothetical protein
           D593_1495 [Streptococcus intermedius BA1]
           gi|422112922|gb|EKU16682.1| hypothetical protein
           D593_1496 [Streptococcus intermedius BA1]
          Length = 121

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +1

Query: 1   LPV*LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWIDRPVSGLFPATKRP----IKTR 168
           L V L F   PQVI+  FN+   GPPVS T PSTC W+   VSGL   TK P    +  R
Sbjct: 30  LQVRLEFLRYPQVIQALFNVPWCGPPVSFTSPSTCSWVGHMVSGLQHDTKTPYSDSVSLR 89

Query: 169 FRYASPIRLSSPQKISR*PIIKKVRTH 249
            R      L+S   ++R  I++K R+H
Sbjct: 90  LRL---FNLTSHHIVTRRFILQKARSH 113