BLASTX nr result
ID: Cocculus23_contig00050083
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00050083 (298 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia trip... 196 2e-48 gb|AHN13527.1| RNA polymerase beta' subunit (chloroplast) [Prunu... 196 2e-48 ref|YP_009020028.1| RNA polymerase beta' subunit [Prunus mume] g... 196 2e-48 ref|YP_009019878.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_009019781.1| RNA polymerase beta'' subunit (chloroplast) ... 196 2e-48 ref|NP_051049.1| RNA polymerase beta'' subunit [Arabidopsis thal... 196 2e-48 ref|YP_008993682.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_009000322.1| rpoC2 protein (chloroplast) [Arabis alpina] ... 196 2e-48 ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008993768.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008993596.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008993424.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008993166.1| RNA polymerase beta' subunit (chloroplast) [... 196 2e-48 ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]... 196 2e-48 dbj|BAO01566.1| RNA polymerase beta'' subunit (chloroplast) [Vit... 196 2e-48 dbj|BAO01482.1| RNA polymerase beta'' subunit (chloroplast) [Vit... 196 2e-48 ref|YP_008082723.1| RNA polymerase beta' subunit [Prinsepia util... 196 2e-48 ref|YP_008081355.1| RNA polymerase beta'' subunit (chloroplast) ... 196 2e-48 >ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia tripetala] gi|608608394|gb|AHW51948.1| RNA polymerase beta'' subunit [Magnolia tripetala] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >gb|AHN13527.1| RNA polymerase beta' subunit (chloroplast) [Prunus kansuensis] Length = 1368 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >ref|YP_009020028.1| RNA polymerase beta' subunit [Prunus mume] gi|589061043|gb|AHK26864.1| RNA polymerase beta' subunit [Prunus mume] Length = 1368 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >ref|YP_009019878.1| RNA polymerase beta' subunit (chloroplast) [Azadirachta indica] gi|586947525|gb|AHJ91308.1| RNA polymerase beta' subunit (chloroplast) [Azadirachta indica] Length = 1395 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >ref|YP_009019781.1| RNA polymerase beta'' subunit (chloroplast) [Vitis rotundifolia] gi|586947402|gb|AHJ91199.1| RNA polymerase beta'' subunit (chloroplast) [Vitis rotundifolia] Length = 1394 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|NP_051049.1| RNA polymerase beta'' subunit [Arabidopsis thaliana] gi|6685905|sp|P56764.1|RPOC2_ARATH RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta''; Short=RNA polymerase subunit beta'' gi|5881684|dbj|BAA84375.1| RNA polymerase beta' subunit-2 [Arabidopsis thaliana] Length = 1376 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >ref|YP_008993682.1| RNA polymerase beta' subunit (chloroplast) [Magnolia salicifolia] Length = 1380 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_009000322.1| rpoC2 protein (chloroplast) [Arabis alpina] gi|571025794|emb|CCW28169.1| rpoC2 protein (chloroplast) [Arabis alpina] Length = 1373 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sprengeri] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008993768.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sinica] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008993596.1| RNA polymerase beta' subunit (chloroplast) [Magnolia odora] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliifera] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008993424.1| RNA polymerase beta' subunit (chloroplast) [Magnolia kobus] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [Magnolia pyramidata] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008993166.1| RNA polymerase beta' subunit (chloroplast) [Magnolia cathcartii] Length = 1382 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa] gi|565666455|emb|CDI73555.1| RNA polymerase beta' subunit [Pyrus spinosa] Length = 1373 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >dbj|BAO01566.1| RNA polymerase beta'' subunit (chloroplast) [Vitis vinifera subsp. caucasica] gi|550533809|dbj|BAO01650.1| RNA polymerase beta'' subunit (chloroplast) [Vitis vinifera subsp. caucasica] Length = 1394 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >dbj|BAO01482.1| RNA polymerase beta'' subunit (chloroplast) [Vitis vinifera subsp. caucasica] Length = 1400 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234 >ref|YP_008082723.1| RNA polymerase beta' subunit [Prinsepia utilis] gi|501418813|gb|AGL94690.1| RNA polymerase beta' subunit [Prinsepia utilis] Length = 1384 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 132 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 191 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 192 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 230 >ref|YP_008081355.1| RNA polymerase beta'' subunit (chloroplast) [Tetracentron sinense] gi|479279193|gb|AGJ72047.1| RNA polymerase beta'' subunit (chloroplast) [Tetracentron sinense] Length = 1378 Score = 196 bits (499), Expect = 2e-48 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -2 Query: 297 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 118 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD Sbjct: 136 SFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVD 195 Query: 117 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 1 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP Sbjct: 196 TAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP 234