BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00049948
         (271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    81   1e-13
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
gb|EYU45383.1| hypothetical protein MIMGU_mgv1a023657mg [Mimulus...    73   5e-11
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]      69   7e-10
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun...    64   2e-08
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...    62   8e-08
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...    62   1e-07
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....    61   1e-07
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise...    61   2e-07
ref|XP_007016122.1| Tetratricopeptide repeat (TPR)-like superfam...    61   2e-07
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...    61   2e-07
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr...    59   9e-07
ref|XP_006371932.1| hypothetical protein POPTR_0018s06450g [Popu...    58   2e-06
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...    58   2e-06

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/85 (54%), Positives = 59/85 (69%)
 Frame = +2

Query: 17  HRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFD 196
           H   +P P ++T  NDRY   +   P+ LSLI++CS T  LKQIHA MLR G+FFD  F 
Sbjct: 15  HSLPTPNPNSITLNNDRY---FANHPT-LSLIDQCSETKQLKQIHAQMLRTGLFFD-PFS 69

Query: 197 ASRLLTLYSLSDFSPSLDYSRKVFD 271
           ASRL+T  +LS F PSLDY+++VFD
Sbjct: 70  ASRLITAAALSPF-PSLDYAQQVFD 93


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/85 (54%), Positives = 59/85 (69%)
 Frame = +2

Query: 17  HRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFD 196
           H   +P P ++T  NDRY   +   P+ LSLI++CS T  LKQIHA MLR G+FFD  F 
Sbjct: 15  HSLPTPNPNSITLNNDRY---FANHPT-LSLIDQCSETKQLKQIHAQMLRTGLFFD-PFS 69

Query: 197 ASRLLTLYSLSDFSPSLDYSRKVFD 271
           ASRL+T  +LS F PSLDY+++VFD
Sbjct: 70  ASRLITAAALSPF-PSLDYAQQVFD 93


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/85 (54%), Positives = 59/85 (69%)
 Frame = +2

Query: 17  HRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFD 196
           H   +P P ++T  NDRY   +   P+ LSLI++CS T  LKQIHA MLR G+FFD  F 
Sbjct: 15  HSLPTPNPNSITLNNDRY---FANHPT-LSLIDQCSETKQLKQIHAQMLRTGLFFD-PFS 69

Query: 197 ASRLLTLYSLSDFSPSLDYSRKVFD 271
           ASRL+T  +LS F PSLDY+++VFD
Sbjct: 70  ASRLITAAALSPF-PSLDYAQQVFD 93


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 44/90 (48%), Positives = 57/90 (63%)
 Frame = +2

Query: 2   RHQHHHRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFF 181
           RHQH  +   P P + T INDRY     +   ++ LI++C +   LKQIHA+MLR G+F 
Sbjct: 13  RHQHFPK---PNPISKTVINDRY----FENHPLVLLIDKCQSIKQLKQIHAYMLRIGLFS 65

Query: 182 DSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           D  F AS+L+   SLS FS SLDY+ KVFD
Sbjct: 66  D-PFSASKLIEASSLSHFS-SLDYAHKVFD 93


>gb|EYU45383.1| hypothetical protein MIMGU_mgv1a023657mg [Mimulus guttatus]
          Length = 701

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 42/80 (52%), Positives = 55/80 (68%)
 Frame = +2

Query: 32  PTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLL 211
           P    +T  NDRY   +   P++ +LIE+CSN+  LKQIHA MLRCG+FFD  F AS+L+
Sbjct: 7   PLTNFVTVNNDRY---FANHPTV-TLIEKCSNSRQLKQIHAQMLRCGLFFD-PFSASKLV 61

Query: 212 TLYSLSDFSPSLDYSRKVFD 271
             Y+LS+ S SL Y+ KVFD
Sbjct: 62  QSYALSELS-SLHYAYKVFD 80


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/90 (48%), Positives = 57/90 (63%)
 Frame = +2

Query: 2   RHQHHHRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFF 181
           RHQH  +   P P + T INDRY     +   ++ LI++  +   LKQIHA+MLR G+FF
Sbjct: 13  RHQHFPK---PNPISKTVINDRY----FENHPLVLLIDKSQSINQLKQIHAYMLRIGLFF 65

Query: 182 DSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           D  F AS+L+   SLS FS SLDY+ KVFD
Sbjct: 66  D-PFSASKLIEASSLSHFS-SLDYAHKVFD 93


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/85 (48%), Positives = 57/85 (67%)
 Frame = +2

Query: 17  HRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFD 196
           H+ + PT  T   +N+  RF       +LSLIE+C++   LKQIHA MLR G+FFD  F 
Sbjct: 13  HQRKLPTSST---VNNDLRF---PNYPLLSLIEQCTSLKELKQIHAQMLRTGLFFD-PFS 65

Query: 197 ASRLLTLYSLSDFSPSLDYSRKVFD 271
           AS+L+T+ ++S FS SLDY+ +VFD
Sbjct: 66  ASKLITVCAMSSFS-SLDYAHQVFD 89


>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
           gi|462402068|gb|EMJ07625.1| hypothetical protein
           PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +2

Query: 32  PTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLL 211
           P   + TF  D    R+   P+ LSLI++C++   LKQ+HA MLR G+ FD  + AS+L+
Sbjct: 15  PNSSSPTFSTD---LRFSSHPA-LSLIDQCTSIKQLKQVHAQMLRTGVLFD-PYSASKLI 69

Query: 212 TLYSLSDFSPSLDYSRKVFD 271
           T  +LS FS SLDY+R+VFD
Sbjct: 70  TASALSSFS-SLDYARQVFD 88


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 41  ETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLY 220
           +  + +N+   FR  Q   ILS I++CS++  LK++HA MLR G+FFD  F AS+L T  
Sbjct: 12  QNFSTLNNNLLFRNHQ---ILSTIDKCSSSKQLKEVHARMLRTGLFFD-PFSASKLFTAS 67

Query: 221 SLSDFSPSLDYSRKVFD 271
           +LS FS +LDY+R +FD
Sbjct: 68  ALSSFS-TLDYARNLFD 83


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +2

Query: 101 LSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           +SLI+RCSN   LKQ HAHM+R G F D  + AS+L  + +LS F+ SL+Y+RKVFD
Sbjct: 35  ISLIDRCSNLRQLKQTHAHMIRTGTFSD-PYSASKLFAIAALSSFA-SLEYARKVFD 89


>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Citrus sinensis]
          Length = 746

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/80 (45%), Positives = 48/80 (60%)
 Frame = +2

Query: 32  PTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLL 211
           P P TLT  N      +     + SLI++C N   LKQIH  MLR G+FFD  + AS+L 
Sbjct: 24  PNPTTLTVNNGHQHHPH----PVFSLIKQCKNIKQLKQIHTQMLRTGLFFD-PYSASKLF 78

Query: 212 TLYSLSDFSPSLDYSRKVFD 271
           T  +L  FS SL+Y+R++FD
Sbjct: 79  TPCALGTFS-SLEYAREMFD 97


>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1049

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/58 (53%), Positives = 44/58 (75%)
 Frame = +2

Query: 98  ILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           +L LI++C+   HLKQ+HA ML+  +FFD  + AS+L+T  +LS FS SLDY+R+VFD
Sbjct: 89  LLPLIDQCTTLNHLKQVHAQMLKTSLFFD-PYSASKLITAAALSPFS-SLDYARQVFD 144


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/57 (54%), Positives = 46/57 (80%)
 Frame = +2

Query: 101 LSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           LSLI++C+N  HLK++HA +LR G+FF   ++AS+L ++ +LS FS SLDY+RKVF+
Sbjct: 35  LSLIDQCTNLKHLKELHATILRSGLFF-HPYNASKLFSVAALSSFS-SLDYARKVFE 89


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/90 (42%), Positives = 52/90 (57%)
 Frame = +2

Query: 2   RHQHHHRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFF 181
           RH +      PT       N+R R         +SLI+RCS+   LKQ HAHM+R G+F 
Sbjct: 14  RHPNFSNPNQPTTN-----NERSRHT-------ISLIDRCSSLRQLKQTHAHMIRTGMFS 61

Query: 182 DSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           D  + AS+L  + +LS F+ SL+Y+RKVFD
Sbjct: 62  D-PYSASKLFAIAALSSFA-SLEYARKVFD 89


>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
          Length = 726

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/65 (50%), Positives = 47/65 (72%)
 Frame = +2

Query: 77  RYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLYSLSDFSPSLDYS 256
           R+L+    ++LI+RC++   LKQIH  MLR G+  D  F AS+L++L +LSDFS SL Y+
Sbjct: 6   RFLEKHPTVTLIDRCTSQKQLKQIHCQMLRSGL-LDDPFAASKLISLSALSDFS-SLAYA 63

Query: 257 RKVFD 271
           +KVFD
Sbjct: 64  QKVFD 68


>ref|XP_007016122.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508786485|gb|EOY33741.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 733

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/58 (56%), Positives = 42/58 (72%)
 Frame = +2

Query: 98  ILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           +LS I +C+N   LKQIHA MLR G+FF + + AS+L    +LS FS SLDY+RKVFD
Sbjct: 28  VLSRINQCTNLNQLKQIHAQMLRTGLFF-NPYSASKLFAASALSPFS-SLDYARKVFD 83


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +2

Query: 29  SPTPETLTFINDRYRFRYLQGPSILS-LIERCSNTAHLKQIHAHMLRCGIFFDSSFDASR 205
           S  P  LT  N++        PS +  LI++C+N  HLKQ+HAHMLR G+FFD    A++
Sbjct: 14  SSNPTILTANNEQK-----SNPSTVPILIDKCANKKHLKQLHAHMLRTGLFFDPP-SATK 67

Query: 206 LLTLYSLSDFSPSLDYSRKVFD 271
           L T  +LS  S SLDY+ KVFD
Sbjct: 68  LFTACALSSPS-SLDYACKVFD 88


>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
           gi|557530863|gb|ESR42046.1| hypothetical protein
           CICLE_v10011151mg [Citrus clementina]
          Length = 737

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/80 (43%), Positives = 47/80 (58%)
 Frame = +2

Query: 32  PTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLL 211
           P   TLT  N      +     + SLI++C N   LKQIH  MLR G+FFD  + AS+L 
Sbjct: 15  PNTTTLTVNNGHQHHPH----PVFSLIKQCKNIKQLKQIHTQMLRTGLFFD-PYSASKLF 69

Query: 212 TLYSLSDFSPSLDYSRKVFD 271
           T  +L  FS SL+Y+R++FD
Sbjct: 70  TPCALGTFS-SLEYAREMFD 88


>ref|XP_006371932.1| hypothetical protein POPTR_0018s06450g [Populus trichocarpa]
           gi|550318175|gb|ERP49729.1| hypothetical protein
           POPTR_0018s06450g [Populus trichocarpa]
          Length = 717

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +2

Query: 92  PSILSLIERCSNTAHLKQIHAHMLRCGIFFDSSFDASRLLTLYSLSDFSPSLDYSRKVF 268
           P I+S IE+CSN + LKQIHA MLR G+FFD  F AS+++   SL D S SL Y+R VF
Sbjct: 47  PCIVS-IEKCSNMSQLKQIHAQMLRTGLFFD-PFTASKIVAFCSLQD-SGSLQYARLVF 102


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
           editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/90 (41%), Positives = 49/90 (54%)
 Frame = +2

Query: 2   RHQHHHRTESPTPETLTFINDRYRFRYLQGPSILSLIERCSNTAHLKQIHAHMLRCGIFF 181
           RH +      PT       N+R R         +SLIERC +   LKQ H HM+R G F 
Sbjct: 14  RHPNFSNPNQPTTN-----NERSRH--------ISLIERCVSLRQLKQTHGHMIRTGTFS 60

Query: 182 DSSFDASRLLTLYSLSDFSPSLDYSRKVFD 271
           D  + AS+L  + +LS F+ SL+Y+RKVFD
Sbjct: 61  D-PYSASKLFAMAALSSFA-SLEYARKVFD 88