BLASTX nr result
ID: Cocculus23_contig00049709
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00049709
(873 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007217161.1| hypothetical protein PRUPE_ppa001868mg [Prun... 77 1e-11
ref|XP_007032641.1| Pentatricopeptide repeat-containing protein,... 72 3e-10
ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containi... 68 4e-09
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi... 68 4e-09
emb|CBI33142.3| unnamed protein product [Vitis vinifera] 68 4e-09
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] 68 4e-09
ref|XP_004504105.1| PREDICTED: pentatricopeptide repeat-containi... 67 7e-09
ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [A... 67 9e-09
ref|XP_006585262.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-08
ref|XP_006585261.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-08
ref|XP_006585260.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-08
ref|XP_006585259.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-08
ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [A... 67 1e-08
ref|XP_007205051.1| hypothetical protein PRUPE_ppa004275mg [Prun... 66 2e-08
ref|XP_007161642.1| hypothetical protein PHAVU_001G086300g [Phas... 65 3e-08
ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containi... 65 3e-08
emb|CBI34375.3| unnamed protein product [Vitis vinifera] 65 3e-08
ref|XP_007207165.1| hypothetical protein PRUPE_ppa023637mg [Prun... 65 3e-08
ref|XP_002879150.1| pentatricopeptide repeat-containing protein ... 65 3e-08
ref|XP_006597934.1| PREDICTED: pentatricopeptide repeat-containi... 65 4e-08
>ref|XP_007217161.1| hypothetical protein PRUPE_ppa001868mg [Prunus persica]
gi|462413311|gb|EMJ18360.1| hypothetical protein
PRUPE_ppa001868mg [Prunus persica]
Length = 751
Score = 76.6 bits (187), Expect = 1e-11
Identities = 32/57 (56%), Positives = 48/57 (84%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
+GE++GR+L+DL PE+SS +A++SN+YAE GKW EVAR+R +K + LK+ PGYS++
Sbjct: 691 IGEILGRRLLDLDPENSSVFAMVSNLYAEGGKWGEVARVRDAAKQRGLKRTPGYSLI 747
>ref|XP_007032641.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508711670|gb|EOY03567.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 790
Score = 72.0 bits (175), Expect = 3e-10
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
+GE++G +L+DL P++ S Y L+SN+YAE+GKW+ AR+R ++K + LKK PGYS++
Sbjct: 728 MGEVIGNRLLDLEPDNPSVYNLVSNLYAESGKWDAAARMRNMAKKRGLKKPPGYSLI 784
>ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 317
Score = 68.2 bits (165), Expect = 4e-09
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL +K+++L P++S AY +LSNIYA AG W EV R+R + + Q +KKQP YS +
Sbjct: 213 LGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWM 269
>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 68.2 bits (165), Expect = 4e-09
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL +K+++L P++S AY +LSNIYA AG W EV R+R + + Q +KKQP YS +
Sbjct: 486 LGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWM 542
>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 68.2 bits (165), Expect = 4e-09
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL +K+++L P++S AY +LSNIYA AG W EV R+R + + Q +KKQP YS +
Sbjct: 414 LGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWM 470
>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 68.2 bits (165), Expect = 4e-09
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL +K+++L P++S AY +LSNIYA AG W EV R+R + + Q +KKQP YS +
Sbjct: 486 LGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWM 542
>ref|XP_004504105.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cicer arietinum]
Length = 569
Score = 67.4 bits (163), Expect = 7e-09
Identities = 36/89 (40%), Positives = 51/89 (57%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSMLI** 181
LGEL R +++L P +S AY +LSNIYA AGKW +V R+R + K Q +KKQ YS
Sbjct: 469 LGELAARNILNLDPYNSGAYVMLSNIYAAAGKWKDVNRVRVLMKEQGVKKQRAYS----- 523
Query: 182 RWIRKYK*TLKLKHDIHCFRLSFEDFPNV 268
W +++ + +HCF PN+
Sbjct: 524 -W-------MQIGNKLHCFVGGDPSHPNI 544
>ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [Amborella trichopoda]
gi|548832639|gb|ERM95420.1| hypothetical protein
AMTR_s00008p00241920 [Amborella trichopoda]
Length = 620
Score = 67.0 bits (162), Expect = 9e-09
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL KL+DL P++ S Y LLSN+YA G W EV RLR + + + LKKQPGYS +
Sbjct: 509 LGELAYEKLVDLQPQNPSPYILLSNMYAAMGMWREVTRLRFLMRERGLKKQPGYSWM 565
>ref|XP_006585262.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X4 [Glycine max]
Length = 569
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL R++++L P +S AY +LSNIYA AGKW +V R+R + K Q +KKQ YS L
Sbjct: 469 LGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWL 525
>ref|XP_006585261.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X3 [Glycine max]
Length = 571
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL R++++L P +S AY +LSNIYA AGKW +V R+R + K Q +KKQ YS L
Sbjct: 469 LGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWL 525
>ref|XP_006585260.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Glycine max]
Length = 571
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL R++++L P +S AY +LSNIYA AGKW +V R+R + K Q +KKQ YS L
Sbjct: 469 LGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWL 525
>ref|XP_006585259.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 597
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGEL R++++L P +S AY +LSNIYA AGKW +V R+R + K Q +KKQ YS L
Sbjct: 469 LGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWL 525
>ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [Amborella trichopoda]
gi|548852118|gb|ERN10288.1| hypothetical protein
AMTR_s00177p00030400 [Amborella trichopoda]
Length = 600
Score = 66.6 bits (161), Expect = 1e-08
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSM 169
+GE+V +L+ L PE+S Y LLSNIYA+AG+W RLRT ++ + LKK PGYS+
Sbjct: 543 MGEVVASQLLSLEPENSGTYTLLSNIYADAGQWRSAERLRTSARERGLKKIPGYSL 598
>ref|XP_007205051.1| hypothetical protein PRUPE_ppa004275mg [Prunus persica]
gi|462400693|gb|EMJ06250.1| hypothetical protein
PRUPE_ppa004275mg [Prunus persica]
Length = 519
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYS 166
+GEL +K++DL P SS Y LSNIYA AGKW +VARLRT+ K +KKQ +S
Sbjct: 414 IGELAAKKILDLNPHSSGPYVSLSNIYAAAGKWRDVARLRTLMKEHGVKKQHAHS 468
>ref|XP_007161642.1| hypothetical protein PHAVU_001G086300g [Phaseolus vulgaris]
gi|561035106|gb|ESW33636.1| hypothetical protein
PHAVU_001G086300g [Phaseolus vulgaris]
Length = 669
Score = 65.5 bits (158), Expect = 3e-08
Identities = 36/87 (41%), Positives = 50/87 (57%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSMLI** 181
LGE+ RKL L P S Y LLSNIYA+AG+W+EV R+R + K + L K PG+S+
Sbjct: 484 LGEISARKLFQLDPSSCGYYVLLSNIYADAGRWDEVERMRILMKNRGLLKTPGFSI---- 539
Query: 182 RWIRKYK*TLKLKHDIHCFRLSFEDFP 262
++LK IH F + ++ P
Sbjct: 540 ---------VELKGRIHVFLVGDKEHP 557
>ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 65.5 bits (158), Expect = 3e-08
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
+GE VGR L++L P++ YALLSNIYAEAG W++VA +R + K + +K PG SM+
Sbjct: 488 MGERVGRILLELEPQNGGRYALLSNIYAEAGMWDDVAEVRKLMKERGVKTNPGISMV 544
>emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 65.5 bits (158), Expect = 3e-08
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LGE+ +KL++L PE+ SAY LLSN+YA AG+WN V +LR + K + + K+PG S +
Sbjct: 706 LGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWI 762
>ref|XP_007207165.1| hypothetical protein PRUPE_ppa023637mg [Prunus persica]
gi|462402807|gb|EMJ08364.1| hypothetical protein
PRUPE_ppa023637mg [Prunus persica]
Length = 731
Score = 65.1 bits (157), Expect = 3e-08
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LG+L KL+ L P+ S+AY LLSNIYA AG W E A++R + +++KKQPGYS +
Sbjct: 546 LGKLAAEKLIALQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDERNVKKQPGYSWI 602
>ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324989|gb|EFH55409.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 872
Score = 65.1 bits (157), Expect = 3e-08
Identities = 27/57 (47%), Positives = 42/57 (73%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSML 172
LG L K++ ++PE S+AY LLSN+YAE+G W E A++R + +++KK+PGYS +
Sbjct: 686 LGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 742
>ref|XP_006597934.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 734
Score = 64.7 bits (156), Expect = 4e-08
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +2
Query: 2 LGELVGRKLMDLVPESSSAYALLSNIYAEAGKWNEVARLRTISKVQDLKKQPGYSMLI** 181
+ EL KL+++ P+++ Y LLSNIYA AGKW++VA++R+ + + LKK PGYS
Sbjct: 617 VAELAAEKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGYS----- 671
Query: 182 RWIRKYK*TLKLKHDIHCFRLSFEDFP 262
W L+L +H FR++ + P
Sbjct: 672 -W-------LELNGQVHEFRVADQSHP 690