BLASTX nr result

ID: Cocculus23_contig00049672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00049672
         (702 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g...    58   3e-06
ref|XP_002533122.1| conserved hypothetical protein [Ricinus comm...    58   3e-06

>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
           gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
           [Oryza sativa Japonica Group]
          Length = 399

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +1

Query: 22  IFSKCKSSKSAYGYKQWSHPAVVPVAILDRRMVKRGCQHATQVLIQWSDTPLENATWEFL 201
           + S   SS  A+ Y         P+ +LD R++K+G    +QVLIQWSDT +E+ATWE L
Sbjct: 275 LHSTLPSSDDAFQY---------PIMLLDNRLIKKGNTTVSQVLIQWSDTAVEDATWEDL 325

Query: 202 YDLQLRF 222
            DL+ RF
Sbjct: 326 EDLRARF 332


>ref|XP_002533122.1| conserved hypothetical protein [Ricinus communis]
           gi|223527085|gb|EEF29267.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 56

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = +1

Query: 85  VVPVAILDRRMVKRGCQHATQVLIQWSDTPLENATWEFLYDLQLRFLNISLEDK 246
           + P+AI  R+MVKRG Q A +VL+QWS    E A WEFLYDL+ RF   +L +K
Sbjct: 1   MTPLAIQYRKMVKRGNQAAAKVLVQWSGLLPEEARWEFLYDLEQRFPAFNLVNK 54


Top