BLASTX nr result
ID: Cocculus23_contig00049512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00049512
(228 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis] 105 7e-21
ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat... 99 6e-19
emb|CBI27251.3| unnamed protein product [Vitis vinifera] 97 2e-18
ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat... 97 2e-18
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera] 97 2e-18
ref|XP_007045955.1| Pentatricopeptide repeat-containing protein,... 96 4e-18
ref|XP_004239080.1| PREDICTED: putative pentatricopeptide repeat... 95 1e-17
ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citr... 93 3e-17
gb|EPS62831.1| hypothetical protein M569_11957, partial [Genlise... 93 3e-17
ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 93 4e-17
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat... 93 4e-17
ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat... 91 2e-16
ref|XP_002512122.1| pentatricopeptide repeat-containing protein,... 90 3e-16
ref|XP_007157430.1| hypothetical protein PHAVU_002G069500g [Phas... 89 5e-16
ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arab... 86 4e-15
ref|NP_564961.1| pentatricopeptide repeat-containing protein [Ar... 86 5e-15
ref|XP_006391028.1| hypothetical protein EUTSA_v10019580mg [Eutr... 86 7e-15
ref|XP_004490134.1| PREDICTED: putative pentatricopeptide repeat... 84 3e-14
ref|XP_002312273.1| pentatricopeptide repeat-containing family p... 83 4e-14
ref|XP_006301926.1| hypothetical protein CARUB_v10022402mg [Caps... 83 5e-14
>gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis]
Length = 792
Score = 105 bits (262), Expect = 7e-21
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLH+DPL+STKLIESYA+MG ++S+ VF+ P PDSFMWGVLIKS+VWN F+ AI+LY
Sbjct: 28 GLHKDPLASTKLIESYAQMGSLQSSTRVFESFPNPDSFMWGVLIKSHVWNHFFEEAIRLY 87
Query: 46 HEMLSKHTHVSSYIF 2
H+M+ H++ +IF
Sbjct: 88 HKMVYHGIHINGFIF 102
>ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum tuberosum]
gi|565405237|ref|XP_006368014.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g69350,
mitochondrial-like [Solanum tuberosum]
Length = 753
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/75 (58%), Positives = 60/75 (80%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GL +DPL+STKLIESY++MG +++++LVFD P PDSFMWGV+IK +VWN F+ AI LY
Sbjct: 28 GLRKDPLASTKLIESYSQMGSLKTSRLVFDTFPNPDSFMWGVIIKCHVWNSCFQEAIFLY 87
Query: 46 HEMLSKHTHVSSYIF 2
H ML + + SS+I+
Sbjct: 88 HSMLCQLSETSSFIY 102
>emb|CBI27251.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLHR P +STKLIESYA++G ES++ VFD P PDSFMWGVLIK YVW F+ A+ LY
Sbjct: 38 GLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLY 97
Query: 46 HEML-SKHTHVSSYIF 2
HEM+ T +S+++F
Sbjct: 98 HEMVYQDQTQISNFVF 113
>ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLHR P +STKLIESYA++G ES++ VFD P PDSFMWGVLIK YVW F+ A+ LY
Sbjct: 28 GLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLY 87
Query: 46 HEML-SKHTHVSSYIF 2
HEM+ T +S+++F
Sbjct: 88 HEMVYQDQTQISNFVF 103
>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLHR P +STKLIESYA++G ES++ VFD P PDSFMWGVLIK YVW F+ A+ LY
Sbjct: 375 GLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLY 434
Query: 46 HEML-SKHTHVSSYIF 2
HEM+ T +S+++F
Sbjct: 435 HEMVYQDQTQISNFVF 450
>ref|XP_007045955.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508709890|gb|EOY01787.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 830
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLHRDPL STKLIESYA+MG + S++LVF P PDSFMWGVLIK VWN LF+ AI LY
Sbjct: 29 GLHRDPLPSTKLIESYAQMGSLRSSKLVFKNFPNPDSFMWGVLIKCSVWNNLFQEAIFLY 88
Query: 46 HEML-SKHTHVSSYIF 2
M+ + +SS+IF
Sbjct: 89 QTMMKNNQAQISSFIF 104
>ref|XP_004239080.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum lycopersicum]
Length = 753
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/75 (56%), Positives = 59/75 (78%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GL +DPL+STKLIESY++MG +++++ VF+ P PDSFMWGV+IK +VWN F+ AI LY
Sbjct: 28 GLRKDPLASTKLIESYSQMGSLKTSRRVFETFPNPDSFMWGVIIKCHVWNNFFQEAIFLY 87
Query: 46 HEMLSKHTHVSSYIF 2
H ML + + SS+I+
Sbjct: 88 HTMLCQLSETSSFIY 102
>ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citrus clementina]
gi|557540978|gb|ESR52022.1| hypothetical protein
CICLE_v10033549mg [Citrus clementina]
Length = 745
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLH DP +ST+LIESYA+MG + S++LVFD PDSFMW VLIK Y+WN F+ +I LY
Sbjct: 28 GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 87
Query: 46 HEMLSKHTHVSSYIF 2
H+M+ + +S++I+
Sbjct: 88 HKMIREQATISNFIY 102
>gb|EPS62831.1| hypothetical protein M569_11957, partial [Genlisea aurea]
Length = 726
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GL +D L+STKLIESY++MGC+ S+ L+F PDSFMWGVLIK +VWN LF+ A+ LY
Sbjct: 25 GLGQDALASTKLIESYSQMGCLRSSTLIFRSFLDPDSFMWGVLIKCHVWNGLFEEAVALY 84
Query: 46 HEMLSKHTHVSSYIF 2
EML SS+IF
Sbjct: 85 REMLGSFAGTSSFIF 99
>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
LH DPL STKLIESY+++G ++S+ VF +PDSFMWGVL+KS+VWN ++ AI LYH
Sbjct: 29 LHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYH 88
Query: 43 EMLSKHTHVSSYIF 2
+MLS+ +SY F
Sbjct: 89 QMLSQQIQANSYTF 102
>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
LH DPL STKLIESY+++G ++S+ VF +PDSFMWGVL+KS+VWN ++ AI LYH
Sbjct: 29 LHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYH 88
Query: 43 EMLSKHTHVSSYIF 2
+MLS+ +SY F
Sbjct: 89 QMLSQQIQANSYTF 102
>ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/71 (54%), Positives = 55/71 (77%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLH DPL+STKL+ESYA+MG + S++LVF+ P+PDSFM+GVLIK Y+W+ LF + LY
Sbjct: 28 GLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHHLFDQVVSLY 87
Query: 46 HEMLSKHTHVS 14
H + K + ++
Sbjct: 88 HHHIQKGSRLT 98
>ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549302|gb|EEF50791.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 800
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLH DP +STKLIESY+++GC++S++LVF+ PDSFMW VLIK +VW+ AI LY
Sbjct: 28 GLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLY 87
Query: 46 HEMLSKHTHVSSYIF 2
++M+ K +S +IF
Sbjct: 88 NKMIYKQIPISDFIF 102
>ref|XP_007157430.1| hypothetical protein PHAVU_002G069500g [Phaseolus vulgaris]
gi|561030845|gb|ESW29424.1| hypothetical protein
PHAVU_002G069500g [Phaseolus vulgaris]
Length = 825
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/70 (55%), Positives = 55/70 (78%)
Frame = -3
Query: 226 GLHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLY 47
GLH DPL+STKL+ESYA+MG + S++LVF+ P+PDSFM+GVLIK Y+W+ LF + LY
Sbjct: 28 GLHTDPLASTKLLESYAQMGSLPSSRLVFETHPSPDSFMFGVLIKCYLWHQLFHQVVSLY 87
Query: 46 HEMLSKHTHV 17
+ + K +H+
Sbjct: 88 NHHIQKGSHL 97
>ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata] gi|297333071|gb|EFH63489.1| hypothetical protein
ARALYDRAFT_476061 [Arabidopsis lyrata subsp. lyrata]
Length = 1347
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
L RDPL TKLIESYA MG +S++LVF+ P PDSFM+GVLIK VW L AI LYH
Sbjct: 588 LRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYH 647
Query: 43 EMLSKHTHVSSYIF 2
++S+ T +S ++F
Sbjct: 648 RLVSEKTQISKFVF 661
>ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical
protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein,
putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
L RDPL TKLIESYA MG +S++LVF+ P PDSFM+GVLIK VW L AI LYH
Sbjct: 30 LRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYH 89
Query: 43 EMLSKHTHVSSYIF 2
++S+ T +S ++F
Sbjct: 90 RLVSETTQISKFVF 103
>ref|XP_006391028.1| hypothetical protein EUTSA_v10019580mg [Eutrema salsugineum]
gi|557087462|gb|ESQ28314.1| hypothetical protein
EUTSA_v10019580mg [Eutrema salsugineum]
Length = 787
Score = 85.5 bits (210), Expect = 7e-15
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
L DPL TKLIESYA MG +S++LVF+ P PDSFM+GVLIK VW+ L AI LYH
Sbjct: 30 LRSDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWSHLLDTAIDLYH 89
Query: 43 EMLSKHTHVSSYIF 2
++S+ T +S ++F
Sbjct: 90 RLVSEKTQISKFVF 103
>ref|XP_004490134.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cicer arietinum]
Length = 805
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
LH DPL STKL+ESYA+MG ++S++LVF P+PDSFM+GVLIK Y+WN F + LY+
Sbjct: 30 LHNDPLPSTKLLESYAQMGSLQSSRLVFYSYPSPDSFMFGVLIKCYLWNHFFDQVVSLYN 89
Query: 43 EMLSKHTHVSSY 8
H H S+
Sbjct: 90 H----HFHTGSH 97
>ref|XP_002312273.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852093|gb|EEE89640.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 745
Score = 83.2 bits (204), Expect = 4e-14
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -3
Query: 205 SSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYHEMLSKH 26
+STKLIESYA+MG I+S+ LVF+ PDSFMWGVLIK +VW+ F+ AI LY +ML
Sbjct: 35 ASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNE 94
Query: 25 THVSSYIF 2
++S++F
Sbjct: 95 AQITSFVF 102
>ref|XP_006301926.1| hypothetical protein CARUB_v10022402mg [Capsella rubella]
gi|482570636|gb|EOA34824.1| hypothetical protein
CARUB_v10022402mg [Capsella rubella]
Length = 785
Score = 82.8 bits (203), Expect = 5e-14
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3
Query: 223 LHRDPLSSTKLIESYAKMGCIESAQLVFDCSPTPDSFMWGVLIKSYVWNFLFKHAIQLYH 44
L RDPL TKLIESYA MG +S++LVF+ P PDSFM+GVLIK VW L AI LYH
Sbjct: 30 LRRDPLPVTKLIESYAFMGSPDSSRLVFEGFPYPDSFMYGVLIKCNVWCHLLDTAIDLYH 89
Query: 43 EMLSKHTHVSSYIF 2
++ + T +S ++F
Sbjct: 90 RLVLEKTQISKFVF 103