BLASTX nr result
ID: Cocculus23_contig00049507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00049507
(265 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305340.1| PREDICTED: putative pentatricopeptide repeat... 142 4e-32
ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat... 140 2e-31
emb|CBI30291.3| unnamed protein product [Vitis vinifera] 140 2e-31
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera] 140 2e-31
ref|XP_007203510.1| hypothetical protein PRUPE_ppa024877mg [Prun... 138 7e-31
ref|XP_006576583.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_007027733.1| Pentatricopeptide repeat superfamily protein... 130 2e-28
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi... 120 3e-25
ref|XP_004986483.1| PREDICTED: putative pentatricopeptide repeat... 119 3e-25
gb|EXB88710.1| hypothetical protein L484_015395 [Morus notabilis] 119 4e-25
ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [S... 117 1e-24
gb|EMT07257.1| Pentatricopeptide repeat-containing protein [Aegi... 117 2e-24
gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Jap... 117 2e-24
gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japo... 117 2e-24
gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indi... 117 2e-24
ref|NP_001064914.1| Os10g0488900 [Oryza sativa Japonica Group] g... 117 2e-24
ref|XP_006662462.1| PREDICTED: putative pentatricopeptide repeat... 113 3e-23
gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays] 110 2e-22
>ref|XP_004305340.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Fragaria vesca subsp. vesca]
Length = 633
Score = 142 bits (359), Expect = 4e-32
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+IDLLGRAGRL+EA EFINSMP +PNAFGWCSFL +C +GDKERG+LAAEKL++LEPEN
Sbjct: 404 IIDLLGRAGRLEEAEEFINSMPLQPNAFGWCSFLGACTIHGDKERGKLAAEKLIQLEPEN 463
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG HVLLS ++A ++WDD RIVRKMM
Sbjct: 464 SGAHVLLSTLHAKEKKWDDFRIVRKMM 490
>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 140 bits (353), Expect = 2e-31
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAGRLKEA EFIN MPFEPNAFGWCSFL +CR +GDKE G+LAAEKL++LEP+N
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKN 511
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG VLLS IYA+ RQW+DVR VR M
Sbjct: 512 SGALVLLSNIYANERQWEDVRSVRMRM 538
>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 140 bits (353), Expect = 2e-31
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAGRLKEA EFIN MPFEPNAFGWCSFL +CR +GDKE G+LAAEKL++LEP+N
Sbjct: 387 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKN 446
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG VLLS IYA+ RQW+DVR VR M
Sbjct: 447 SGALVLLSNIYANERQWEDVRSVRMRM 473
>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 140 bits (353), Expect = 2e-31
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAGRLKEA EFIN MPFEPNAFGWCSFL +CR +GDKE G+LAAEKL++LEP+N
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKN 511
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG VLLS IYA+ RQW+DVR VR M
Sbjct: 512 SGALVLLSNIYANERQWEDVRSVRMRM 538
>ref|XP_007203510.1| hypothetical protein PRUPE_ppa024877mg [Prunus persica]
gi|462399041|gb|EMJ04709.1| hypothetical protein
PRUPE_ppa024877mg [Prunus persica]
Length = 681
Score = 138 bits (348), Expect = 7e-31
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAGRL EA EFIN+MP +PNAFGWCSFL +CR +GD+ERG+LAAEKLM+LEPEN
Sbjct: 452 VIDLLGRAGRLNEAEEFINNMPIQPNAFGWCSFLGACRIHGDQERGKLAAEKLMQLEPEN 511
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
G VLLS IYA +QW+DVR VRK M
Sbjct: 512 IGARVLLSNIYAKEQQWEDVRSVRKKM 538
>ref|XP_006576583.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X3 [Glycine max]
Length = 652
Score = 137 bits (345), Expect = 2e-30
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAG+LKEA +FIN+MPFEPN FGWCSFL +C+ +GD ER + AA+KLM+LEPEN
Sbjct: 423 VIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPEN 482
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG HVLLS IYA +QW+DV+ +RKM+
Sbjct: 483 SGAHVLLSNIYAKEKQWEDVQSLRKMI 509
>ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
Length = 690
Score = 137 bits (345), Expect = 2e-30
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAG+LKEA +FIN+MPFEPN FGWCSFL +C+ +GD ER + AA+KLM+LEPEN
Sbjct: 461 VIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPEN 520
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG HVLLS IYA +QW+DV+ +RKM+
Sbjct: 521 SGAHVLLSNIYAKEKQWEDVQSLRKMI 547
>ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
Length = 698
Score = 137 bits (345), Expect = 2e-30
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAG+LKEA +FIN+MPFEPN FGWCSFL +C+ +GD ER + AA+KLM+LEPEN
Sbjct: 469 VIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPEN 528
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG HVLLS IYA +QW+DV+ +RKM+
Sbjct: 529 SGAHVLLSNIYAKEKQWEDVQSLRKMI 555
>ref|XP_007027733.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508716338|gb|EOY08235.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 693
Score = 130 bits (327), Expect = 2e-28
Identities = 59/87 (67%), Positives = 74/87 (85%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLL RAG+LKEA +F++ MPFEPNAFGWCS L +C+ +GDK+RG++AAEKLM+LEP N
Sbjct: 464 VIDLLARAGKLKEAEDFMSKMPFEPNAFGWCSLLGACKIHGDKKRGKVAAEKLMQLEPAN 523
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
SG VLLS IYA +QW++VR +RKMM
Sbjct: 524 SGAPVLLSNIYAKEQQWEEVRTLRKMM 550
>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 120 bits (300), Expect = 3e-25
Identities = 53/87 (60%), Positives = 69/87 (79%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID+ GRAGRL EA +FI MP +PNA+GWCS L +CR G+KE GE+AA+ +M+LEP+N
Sbjct: 466 IIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDN 525
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 526 TGVHVSLSGIYASLGQWEDVKAVRKLM 552
>ref|XP_004986483.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Setaria italica]
Length = 697
Score = 119 bits (299), Expect = 3e-25
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID+ GRAGRL+EA +FI MP +PNA GWCS L +CR G+KE GE+AA+ LM+LEP+N
Sbjct: 468 IIDMYGRAGRLREAEKFIGEMPVKPNAHGWCSLLRACRMRGNKELGEIAAQNLMKLEPDN 527
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 528 TGIHVSLSGIYASLGQWEDVKAVRKLM 554
>gb|EXB88710.1| hypothetical protein L484_015395 [Morus notabilis]
Length = 686
Score = 119 bits (298), Expect = 4e-25
Identities = 55/87 (63%), Positives = 69/87 (79%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
VIDLLGRAGRLK+A EFIN M F+PNAFGWCSFL +CR +GD +RG+ A E+L++LEPEN
Sbjct: 457 VIDLLGRAGRLKDAEEFINGMLFKPNAFGWCSFLGACRVHGDTKRGKFAVEELIKLEPEN 516
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
G VLLS +YA +W++VR +R M
Sbjct: 517 IGAIVLLSNLYAKEGKWEEVRRLRTKM 543
>ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
gi|241920899|gb|EER94043.1| hypothetical protein
SORBIDRAFT_01g018760 [Sorghum bicolor]
Length = 564
Score = 117 bits (294), Expect = 1e-24
Identities = 52/87 (59%), Positives = 69/87 (79%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID+ GRAGRL EA +FI+ MP +PNA+GWCS L +CR G+KE GE+AA+ LM+L+P+N
Sbjct: 466 IIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRGNKELGEIAAQNLMKLDPDN 525
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+D + VRK+M
Sbjct: 526 TGIHVSLSGIYASLGQWEDAKSVRKLM 552
>gb|EMT07257.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 695
Score = 117 bits (293), Expect = 2e-24
Identities = 51/87 (58%), Positives = 68/87 (78%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID+ GRAGRL EA +FI+ MP +P+ +GWCS L +CR G+KE GE AA+K+M LEP+N
Sbjct: 466 IIDMYGRAGRLAEAEKFIHEMPIKPSVYGWCSLLGACRMRGNKELGEFAAQKIMELEPDN 525
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ +RK+M
Sbjct: 526 TGVHVSLSGIYASLGQWEDVKAIRKLM 552
>gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
Length = 698
Score = 117 bits (293), Expect = 2e-24
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID GRAGRL EA +FI+ MP +PNA+GWCS L +CR G KE GE+AA+ LM+LEP N
Sbjct: 469 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 528
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 529 TGIHVSLSGIYASLGQWEDVKAVRKLM 555
>gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 117 bits (293), Expect = 2e-24
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID GRAGRL EA +FI+ MP +PNA+GWCS L +CR G KE GE+AA+ LM+LEP N
Sbjct: 388 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 447
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 448 TGIHVSLSGIYASLGQWEDVKAVRKLM 474
>gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 117 bits (293), Expect = 2e-24
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID GRAGRL EA +FI+ MP +PNA+GWCS L +CR G KE GE+AA+ LM+LEP N
Sbjct: 618 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 677
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 678 TGIHVSLSGIYASLGQWEDVKAVRKLM 704
>ref|NP_001064914.1| Os10g0488900 [Oryza sativa Japonica Group]
gi|113639523|dbj|BAF26828.1| Os10g0488900, partial
[Oryza sativa Japonica Group]
Length = 366
Score = 117 bits (293), Expect = 2e-24
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID GRAGRL EA +FI+ MP +PNA+GWCS L +CR G KE GE+AA+ LM+LEP N
Sbjct: 137 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 196
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 197 TGIHVSLSGIYASLGQWEDVKAVRKLM 223
>ref|XP_006662462.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like, partial [Oryza brachyantha]
Length = 558
Score = 113 bits (282), Expect = 3e-23
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID+ GRAGRL EA +FI+ M +PNA+GWCS L +CR +KE GE+AA+ LM+LEP N
Sbjct: 329 IIDMYGRAGRLDEAYKFISEMSIKPNAYGWCSLLGACRMRRNKELGEIAAQNLMKLEPGN 388
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G HV LS IYAS QW+DV+ VRK+M
Sbjct: 389 TGIHVSLSGIYASLGQWEDVKAVRKLM 415
>gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
Length = 564
Score = 110 bits (275), Expect = 2e-22
Identities = 48/87 (55%), Positives = 66/87 (75%)
Frame = +3
Query: 3 VIDLLGRAGRLKEAAEFINSMPFEPNAFGWCSFLSSCRTYGDKERGELAAEKLMRLEPEN 182
+ID+ GRAGRL EA +FI+ MP +P+A+ WCS L +CR G+KE GE+AA+ LM+L+P N
Sbjct: 466 IIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKELGEVAAQNLMKLDPNN 525
Query: 183 SGTHVLLSKIYASARQWDDVRIVRKMM 263
+G H+ LS IY S QW+DV+ V+K M
Sbjct: 526 TGIHISLSGIYTSLGQWEDVKAVKKSM 552