BLASTX nr result
ID: Cocculus23_contig00048973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00048973
(296 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU32047.1| hypothetical protein MIMGU_mgv1a003305mg [Mimulus... 141 1e-31
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit... 139 3e-31
emb|CAN80577.1| hypothetical protein VITISV_031734 [Vitis vinifera] 139 3e-31
ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arab... 138 9e-31
ref|XP_006339484.1| PREDICTED: flap endonuclease GEN-like 1-like... 137 1e-30
gb|AAF76467.1|AC020622_1 Contains similarity to excision repair ... 137 2e-30
ref|NP_171691.2| 5'-3' exonuclease family protein [Arabidopsis t... 137 2e-30
ref|XP_006303692.1| hypothetical protein CARUB_v10011785mg [Caps... 137 2e-30
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu... 137 2e-30
ref|XP_002320770.2| hypothetical protein POPTR_0014s07330g [Popu... 136 3e-30
ref|XP_006418466.1| hypothetical protein EUTSA_v10007143mg [Eutr... 134 1e-29
ref|XP_007219126.1| hypothetical protein PRUPE_ppa015861mg [Prun... 134 2e-29
ref|XP_004229854.1| PREDICTED: flap endonuclease GEN-like 1-like... 133 2e-29
ref|XP_006857917.1| hypothetical protein AMTR_s00069p00141590 [A... 132 4e-29
ref|XP_007051942.1| 5'-3' exonuclease family protein, putative i... 132 5e-29
gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun... 132 7e-29
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago... 132 7e-29
ref|NP_001184887.1| 5'-3' exonuclease family protein [Arabidopsi... 131 1e-28
ref|XP_006602772.1| PREDICTED: flap endonuclease GEN-like 1-like... 130 3e-28
ref|XP_004492689.1| PREDICTED: flap endonuclease GEN-like 1-like... 130 3e-28
>gb|EYU32047.1| hypothetical protein MIMGU_mgv1a003305mg [Mimulus guttatus]
Length = 593
Score = 141 bits (355), Expect = 1e-31
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
V+DG PSPLK+QARI RFFRSSGI+LS E+ GVSVERN F KC++ECVELL+LL
Sbjct: 73 VLDGTPSPLKSQARIARFFRSSGIELSSFPEAEE-GVSVERNTAFTKCIQECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MPVLKA EAEALCAQLN +G VDA ITSDSD FLYGA
Sbjct: 132 MPVLKAKGEAEALCAQLNRQGHVDACITSDSDAFLYGA 169
>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
gi|296089141|emb|CBI38844.3| unnamed protein product
[Vitis vinifera]
Length = 667
Score = 139 bits (351), Expect = 3e-31
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFR SGIDLSGL VE+ GVSVERN F + V+ECVELL+LL
Sbjct: 73 VVDGTPSPLKSQARIARFFRGSGIDLSGLPVVEE-GVSVERNAEFSRRVQECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG VDA IT+DSD FL+GA
Sbjct: 132 IPVLKAREEAEALCAQLNSEGHVDACITADSDAFLFGA 169
>emb|CAN80577.1| hypothetical protein VITISV_031734 [Vitis vinifera]
Length = 239
Score = 139 bits (351), Expect = 3e-31
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFR SGIDLSGL VE+ GVSVERN F + V+ECVELL+LL
Sbjct: 73 VVDGTPSPLKSQARIARFFRGSGIDLSGLPVVEE-GVSVERNAEFSRRVQECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG VDA IT+DSD FL+GA
Sbjct: 132 IPVLKAREEAEALCAQLNSEGHVDACITADSDAFLFGA 169
>ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
lyrata] gi|297335190|gb|EFH65607.1| hypothetical protein
ARALYDRAFT_311256 [Arabidopsis lyrata subsp. lyrata]
Length = 590
Score = 138 bits (347), Expect = 9e-31
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFRSSGID L ++D GVSVERN+LF + V+ECVELL+LLS
Sbjct: 73 VVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKD-GVSVERNKLFCEWVKECVELLELLS 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG VDA IT DSD FL+GA
Sbjct: 132 IPVLKANGEAEALCAQLNSEGYVDACITPDSDAFLFGA 169
>ref|XP_006339484.1| PREDICTED: flap endonuclease GEN-like 1-like [Solanum tuberosum]
Length = 603
Score = 137 bits (346), Expect = 1e-30
Identities = 70/98 (71%), Positives = 81/98 (82%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
V DG SPLK+QARI RFFR+SGIDLS L V ++G+S+ERN+ FQKC +ECVELL+LL
Sbjct: 73 VTDGTASPLKSQARIARFFRASGIDLSSLP-VAEEGISIERNKAFQKCEKECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLN EG VDA ITSDSD FL+GA
Sbjct: 132 VPVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGA 169
>gb|AAF76467.1|AC020622_1 Contains similarity to excision repair protein ERCC5 from Homo
sapiens gi|1082359 and contains XPG N-terminal PF|00752
and XPG I-region PF|00867 domains [Arabidopsis thaliana]
Length = 497
Score = 137 bits (345), Expect = 2e-30
Identities = 72/98 (73%), Positives = 81/98 (82%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFRSSGID L ++D GVSVERN+LF + VRECVELL+LL
Sbjct: 73 VVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKD-GVSVERNKLFSEWVRECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNS+G VDA IT DSD FL+GA
Sbjct: 132 IPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGA 169
>ref|NP_171691.2| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|357529503|sp|Q9LPD2.3|GENL1_ARATH RecName: Full=Flap
endonuclease GEN-like 1 gi|332189224|gb|AEE27345.1|
5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 599
Score = 137 bits (345), Expect = 2e-30
Identities = 72/98 (73%), Positives = 81/98 (82%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFRSSGID L ++D GVSVERN+LF + VRECVELL+LL
Sbjct: 73 VVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKD-GVSVERNKLFSEWVRECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNS+G VDA IT DSD FL+GA
Sbjct: 132 IPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGA 169
>ref|XP_006303692.1| hypothetical protein CARUB_v10011785mg [Capsella rubella]
gi|482572403|gb|EOA36590.1| hypothetical protein
CARUB_v10011785mg [Capsella rubella]
Length = 597
Score = 137 bits (344), Expect = 2e-30
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+Q RI RFFRSSGID L +++ GVSVERN+LF + V ECVELLQLL
Sbjct: 73 VVDGTPSPLKSQTRISRFFRSSGIDTPNLPAIKE-GVSVERNKLFSEWVAECVELLQLLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG VDA ITSDSD FL+GA
Sbjct: 132 IPVLKAKGEAEALCAQLNSEGYVDACITSDSDAFLFGA 169
>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
gi|223548967|gb|EEF50456.1| DNA binding protein,
putative [Ricinus communis]
Length = 609
Score = 137 bits (344), Expect = 2e-30
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK++ARI RFFRSSGID S L E+ GVSVERN F KCV+ECVELL+L
Sbjct: 73 VVDGTPSPLKSRARISRFFRSSGIDSSVLPTPEE-GVSVERNGAFLKCVKECVELLELFG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MPVLKA EAEALCAQLNS+G VDA IT+DSD FL+GA
Sbjct: 132 MPVLKANGEAEALCAQLNSQGLVDACITADSDAFLFGA 169
>ref|XP_002320770.2| hypothetical protein POPTR_0014s07330g [Populus trichocarpa]
gi|550323704|gb|EEE99085.2| hypothetical protein
POPTR_0014s07330g [Populus trichocarpa]
Length = 615
Score = 136 bits (343), Expect = 3e-30
Identities = 70/98 (71%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK++ARI RFFR SG+D+SGL E GVS ERN+ F KCV+ECVELL+L
Sbjct: 74 VVDGTPSPLKSKARIARFFRFSGVDVSGLPVAE--GVSAERNKTFLKCVQECVELLELFG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MPVLKA EAEALCAQLN+EG VDA IT+DSD FL+GA
Sbjct: 132 MPVLKANGEAEALCAQLNAEGLVDACITADSDAFLFGA 169
>ref|XP_006418466.1| hypothetical protein EUTSA_v10007143mg [Eutrema salsugineum]
gi|557096237|gb|ESQ36819.1| hypothetical protein
EUTSA_v10007143mg [Eutrema salsugineum]
Length = 595
Score = 134 bits (338), Expect = 1e-29
Identities = 70/98 (71%), Positives = 82/98 (83%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFF+SSGID S L +++ GVSVERN+LF + VRECVELL+LL
Sbjct: 73 VVDGTPSPLKSQARISRFFQSSGIDTSSLPAIKE-GVSVERNKLFCEWVRECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PV+KA EAEALCAQLNS+G VDA IT DSD FL+GA
Sbjct: 132 IPVVKAKGEAEALCAQLNSQGYVDACITPDSDAFLFGA 169
>ref|XP_007219126.1| hypothetical protein PRUPE_ppa015861mg [Prunus persica]
gi|462415588|gb|EMJ20325.1| hypothetical protein
PRUPE_ppa015861mg [Prunus persica]
Length = 611
Score = 134 bits (336), Expect = 2e-29
Identities = 70/98 (71%), Positives = 79/98 (80%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK++ARI RFFRSSGID S L V DG SVERN F K ++ECVELL+LL
Sbjct: 73 VVDGSPSPLKSEARIARFFRSSGIDSSSLP-VAGDGASVERNSTFTKYIQECVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MPV+KA EAEALCAQL++EG VDA ITSDSD FL+GA
Sbjct: 132 MPVVKAKGEAEALCAQLDAEGHVDACITSDSDAFLFGA 169
>ref|XP_004229854.1| PREDICTED: flap endonuclease GEN-like 1-like [Solanum lycopersicum]
Length = 603
Score = 133 bits (335), Expect = 2e-29
Identities = 68/98 (69%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
V DG SPLK+QARI RFFR+SGIDLS L V ++G+S+ERN+ FQKC +ECV+LL+LL
Sbjct: 73 VTDGTASPLKSQARIARFFRASGIDLSSLP-VAEEGISIERNKAFQKCEKECVDLLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+ VLKA EAEALCAQLN EG VDA ITSDSD FL+GA
Sbjct: 132 VSVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGA 169
>ref|XP_006857917.1| hypothetical protein AMTR_s00069p00141590 [Amborella trichopoda]
gi|548862019|gb|ERN19384.1| hypothetical protein
AMTR_s00069p00141590 [Amborella trichopoda]
Length = 647
Score = 132 bits (333), Expect = 4e-29
Identities = 67/98 (68%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
V+DG PSPLKAQAR ERFFR SGID+SG E++ ++ RN +F + V+ECVELL+LL
Sbjct: 73 VLDGNPSPLKAQARAERFFRMSGIDISGFSHSENE--TIARNPVFNRSVQECVELLELLG 130
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MP+LKA EAEALCAQL+SEGRVDA IT+DSD FLYGA
Sbjct: 131 MPILKAECEAEALCAQLDSEGRVDACITADSDAFLYGA 168
>ref|XP_007051942.1| 5'-3' exonuclease family protein, putative isoform 1 [Theobroma
cacao] gi|508704203|gb|EOX96099.1| 5'-3' exonuclease
family protein, putative isoform 1 [Theobroma cacao]
Length = 611
Score = 132 bits (332), Expect = 5e-29
Identities = 69/98 (70%), Positives = 77/98 (78%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
V+DG PSPLK+QARI RFFR SGID S VE+ GVS ERN F KCV +CVELL+LL
Sbjct: 73 VLDGTPSPLKSQARIARFFRFSGIDTSTSTGVEE-GVSKERNSAFSKCVDDCVELLELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MPVLKA EAEALCAQLN +G VDA IT+DSD FL+GA
Sbjct: 132 MPVLKANGEAEALCAQLNKDGHVDACITADSDAFLFGA 169
>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
Length = 547
Score = 132 bits (331), Expect = 7e-29
Identities = 68/98 (69%), Positives = 78/98 (79%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFRSSGI+ + L V ++GVS RN F +CV+ECVEL +LL
Sbjct: 8 VVDGTPSPLKSQARIARFFRSSGIESTSLP-VAEEGVSAGRNSTFSRCVQECVELAKLLG 66
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG VDA IT DSD FL+GA
Sbjct: 67 IPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGA 104
>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
class 2 [Medicago truncatula]
gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
protein [Medicago truncatula]
Length = 612
Score = 132 bits (331), Expect = 7e-29
Identities = 68/98 (69%), Positives = 78/98 (79%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFRSSGI+ + L V ++GVS RN F +CV+ECVEL +LL
Sbjct: 73 VVDGTPSPLKSQARIARFFRSSGIESTSLP-VAEEGVSAGRNSTFSRCVQECVELAKLLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG VDA IT DSD FL+GA
Sbjct: 132 IPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGA 169
>ref|NP_001184887.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332189225|gb|AEE27346.1| 5'-3' exonuclease family
protein [Arabidopsis thaliana]
Length = 598
Score = 131 bits (329), Expect = 1e-28
Identities = 71/98 (72%), Positives = 80/98 (81%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK+QARI RFFRSSGID L ++D GVSVERN+LF + VREC ELL+LL
Sbjct: 73 VVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKD-GVSVERNKLFSEWVREC-ELLELLG 130
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNS+G VDA IT DSD FL+GA
Sbjct: 131 IPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGA 168
>ref|XP_006602772.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
Length = 606
Score = 130 bits (326), Expect = 3e-28
Identities = 65/98 (66%), Positives = 81/98 (82%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
+VDG PSPLK++ARI R+FRSSGI+L+ L V ++GVS ERN +F V++CVEL++LL
Sbjct: 74 IVDGTPSPLKSRARIVRYFRSSGIELASLP-VPEEGVSAERNHMFSSHVQKCVELVELLG 132
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
MPVLKA EAE+LCAQLNSEG VDA IT+DSD FL+GA
Sbjct: 133 MPVLKAKGEAESLCAQLNSEGHVDACITADSDAFLFGA 170
>ref|XP_004492689.1| PREDICTED: flap endonuclease GEN-like 1-like [Cicer arietinum]
Length = 616
Score = 130 bits (326), Expect = 3e-28
Identities = 67/98 (68%), Positives = 79/98 (80%)
Frame = +1
Query: 1 VVDGLPSPLKAQARIERFFRSSGIDLSGLKRVEDDGVSVERNELFQKCVRECVELLQLLS 180
VVDG PSPLK++ARI RFFRSSGI+ + L V ++GVS ERN F + V+ECVEL +LL
Sbjct: 73 VVDGTPSPLKSKARIARFFRSSGIESTSLP-VPEEGVSAERNSSFSRRVQECVELAELLG 131
Query: 181 MPVLKATSEAEALCAQLNSEGRVDAIITSDSDVFLYGA 294
+PVLKA EAEALCAQLNSEG +DA ITSDSD FL+GA
Sbjct: 132 IPVLKAKGEAEALCAQLNSEGHIDACITSDSDAFLFGA 169