BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00048908
         (578 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   252   6e-65
emb|CBI19766.3| unnamed protein product [Vitis vinifera]              252   6e-65
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]     251   1e-64
ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi...   246   3e-63
gb|EYU38829.1| hypothetical protein MIMGU_mgv1a001151mg [Mimulus...   242   6e-62
ref|XP_006306414.1| hypothetical protein CARUB_v10012347mg [Caps...   239   3e-61
ref|XP_007017649.1| Pentatricopeptide repeat (PPR-like) superfam...   239   4e-61
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   238   7e-61
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   238   7e-61
ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containi...   238   9e-61
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar...   238   1e-60
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   238   1e-60
ref|XP_006473572.1| PREDICTED: pentatricopeptide repeat-containi...   237   1e-60
ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citr...   237   1e-60
ref|XP_007227217.1| hypothetical protein PRUPE_ppa019183mg [Prun...   237   2e-60
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...   236   3e-60
ref|XP_007226562.1| hypothetical protein PRUPE_ppa024458mg [Prun...   236   4e-60
ref|XP_004301846.1| PREDICTED: pentatricopeptide repeat-containi...   235   6e-60
ref|XP_006386200.1| pentatricopeptide repeat-containing family p...   234   2e-59
ref|XP_006416469.1| hypothetical protein EUTSA_v10006756mg [Eutr...   233   4e-59

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  252 bits (643), Expect = 6e-65
 Identities = 122/192 (63%), Positives = 147/192 (76%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ G+EPN             LKALKKG ELHS+ +KIG   D+L+GNSLI++YSK   
Sbjct: 347 MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGE 406

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FD I +KDV++WNSMIGGY QAGYCGKA++LF+KM +S + PNVVTWN MISG
Sbjct: 407 LEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISG 466

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ GDEDQAMDLF RME+ G +KR+ ASWN LIAG LQNG KNKAL  FRQMQ+  I  
Sbjct: 467 YIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRP 526

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 527 NSVTMLSILPAC 538



 Score =  134 bits (338), Expect = 1e-29
 Identities = 68/192 (35%), Positives = 113/192 (58%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +G+ P+                 + GK +HS+ I+ G   ++ + NS++ +Y+KC  
Sbjct: 176 MMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGR 235

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F+++  +D  SWNS+I GY Q G   K+ +LF KMQ+  I+P +VTWN++I+ 
Sbjct: 236 LSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINS 295

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AM+L ++ME    V  +  +W  +I+G  QN ++++AL  FR+M  +GI  
Sbjct: 296 YSQSGKCDDAMELMKKMESFRIVP-DVFTWTSMISGFAQNNRRSQALELFREMLLAGIEP 354

Query: 543 NSITVLSVLPAC 578
           N +TV S + AC
Sbjct: 355 NGVTVTSGISAC 366



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 46/168 (27%), Positives = 77/168 (45%)
 Frame = +3

Query: 18   VEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK 197
            + PN             L A KK KE+H   ++     ++ + N LI+ Y+K  N+  A+
Sbjct: 524  IRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQ 583

Query: 198  QAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKG 377
              F  IS KD+ SWNS+I GY   G    A +LF +M    ++P+  T+  +I  +   G
Sbjct: 584  TIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSG 643

Query: 378  DEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQM 521
              D+   +F  M E   +       + +I  L ++G+  +A+     M
Sbjct: 644  MVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDM 691


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  252 bits (643), Expect = 6e-65
 Identities = 122/192 (63%), Positives = 147/192 (76%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ G+EPN             LKALKKG ELHS+ +KIG   D+L+GNSLI++YSK   
Sbjct: 1   MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGE 60

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FD I +KDV++WNSMIGGY QAGYCGKA++LF+KM +S + PNVVTWN MISG
Sbjct: 61  LEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISG 120

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ GDEDQAMDLF RME+ G +KR+ ASWN LIAG LQNG KNKAL  FRQMQ+  I  
Sbjct: 121 YIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRP 180

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 181 NSVTMLSILPAC 192



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 46/168 (27%), Positives = 77/168 (45%)
 Frame = +3

Query: 18  VEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK 197
           + PN             L A KK KE+H   ++     ++ + N LI+ Y+K  N+  A+
Sbjct: 178 IRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQ 237

Query: 198 QAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKG 377
             F  IS KD+ SWNS+I GY   G    A +LF +M    ++P+  T+  +I  +   G
Sbjct: 238 TIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSG 297

Query: 378 DEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQM 521
             D+   +F  M E   +       + +I  L ++G+  +A+     M
Sbjct: 298 MVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDM 345


>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
          Length = 880

 Score =  251 bits (640), Expect = 1e-64
 Identities = 122/192 (63%), Positives = 147/192 (76%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ GV+PN             LK+L KG E+H+  IKIG   DVL+GNSLI++YSKC  
Sbjct: 334 MLLAGVKPNAVTITSAVSACASLKSLGKGLEIHAFSIKIGLIEDVLVGNSLIDMYSKCGE 393

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA++ FD I EKDVF+WNS+IGGY QAGYCGKA ELFMKMQ+S + PNV+TWNVMISG
Sbjct: 394 LEAAQEVFDMIIEKDVFTWNSLIGGYCQAGYCGKACELFMKMQESDVAPNVITWNVMISG 453

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ GDED+AMDLFRRME+ G VKRN ASWN L+AG L  G+K+KAL  FRQMQ+  ++ 
Sbjct: 454 YIQNGDEDEAMDLFRRMEKDGKVKRNTASWNSLVAGYLHVGEKDKALGIFRQMQSYCVIP 513

Query: 543 NSITVLSVLPAC 578
           N +T+LSVLP C
Sbjct: 514 NLVTMLSVLPTC 525



 Score =  130 bits (327), Expect = 3e-28
 Identities = 64/192 (33%), Positives = 112/192 (58%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +G+ P+                 K  K +HS+ ++ G  G + + NS++ +Y+KC  
Sbjct: 163 MMGDGILPDKFLLPKILEACGNCADFKTAKVIHSMVVRCGFCGSIRVINSILAVYAKCGK 222

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F+S+ ++D+ SWN++I G+ Q G   +A  LF  +++   +P +VTWN+MI+ 
Sbjct: 223 LNWARRFFESMDKRDLVSWNAIISGFCQNGRMEEATRLFDAVREEGTEPGLVTWNIMIAS 282

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AM L ++ME  G V  +  +W  LI+G  QN ++N+AL  F++M  +G+  
Sbjct: 283 YNQLGQTDVAMGLMKKMESLGIVP-DVFTWTSLISGFAQNNRRNQALDLFKEMLLAGVKP 341

Query: 543 NSITVLSVLPAC 578
           N++T+ S + AC
Sbjct: 342 NAVTITSAVSAC 353



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
 Frame = +3

Query: 18  VEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK 197
           V PN             L A KK +E+H   ++     ++ + NSL++ Y+K  N+  ++
Sbjct: 511 VIPNLVTMLSVLPTCANLLAEKKVREIHCCILRRVLDSELPVANSLLDTYAKAGNMTYSR 570

Query: 198 QAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPN-----VVTWNVMISG 362
             FD +  KD+ +WNS+I GY   G+   A +LF  M  S ++PN      + ++  +SG
Sbjct: 571 TIFDRMLSKDIITWNSIIAGYVLHGFSNAALDLFDDMTKSGLKPNRGTFLSIIYSCSLSG 630

Query: 363 YIQKG 377
            + KG
Sbjct: 631 LVDKG 635


>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Solanum lycopersicum]
          Length = 884

 Score =  246 bits (628), Expect = 3e-63
 Identities = 114/192 (59%), Positives = 150/192 (78%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++ GV P+             LK L+KGKELHS+ +K+G  G V++GN+L++LYSKC  
Sbjct: 337 MILNGVTPSEVTLTSTVSACASLKDLRKGKELHSLVVKLGFDGGVIVGNALVDLYSKCGK 396

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA+Q FD I EKDV+SWNS+IGGY QAG CGKA++LFMKM +  + PNV+TWNV+I+G
Sbjct: 397 LEAARQVFDMIPEKDVYSWNSLIGGYCQAGCCGKAYDLFMKMHEFAVSPNVITWNVLITG 456

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           ++Q GDEDQA+DLF RME+ G V+R+AASWN LIAG L NGQK+KAL  FR+MQ+SG+  
Sbjct: 457 HMQNGDEDQALDLFWRMEKDGNVERDAASWNALIAGYLHNGQKDKALGIFRKMQSSGLKP 516

Query: 543 NSITVLSVLPAC 578
           N++T+LS+LPAC
Sbjct: 517 NTVTILSILPAC 528



 Score =  118 bits (295), Expect = 1e-24
 Identities = 61/192 (31%), Positives = 107/192 (55%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++ G  +HSI I+ G + ++ + NSL+ +Y+KC  
Sbjct: 166 MMGDGVVPDSFLFPRILQASANCGDVETGMLIHSIAIRCGMSSEIRVNNSLLAVYAKCGL 225

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  AK+ F+S+  +D  SWNSMI  Y   G    A  L   M    ++P ++TWN++I+ 
Sbjct: 226 LGCAKRIFESMEMRDTVSWNSMIMAYCHKGDIVVARRLLNLMPLEGVEPGLITWNILIAS 285

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D+A+++ + ME  G +  +  +W  LI+G+ Q+ + ++AL  FR+M  +G+  
Sbjct: 286 YNQLGRCDEALEVMKEMEGNG-IMPDVFTWTSLISGMSQHNRNSQALELFREMILNGVTP 344

Query: 543 NSITVLSVLPAC 578
           + +T+ S + AC
Sbjct: 345 SEVTLTSTVSAC 356



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 43/140 (30%), Positives = 74/140 (52%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M   G++PN             L   KK KE+H   ++     ++ + NSLI+ YSK   
Sbjct: 509 MQSSGLKPNTVTILSILPACANLIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGG 568

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L+ +K  FD +S KD+ SWN++I GY   G+  ++ +LF +M+++ ++PN  T++ +I  
Sbjct: 569 LQYSKTIFDVMSTKDIISWNTLIAGYVLHGFSSESTKLFHQMEEAGLKPNRGTFSSVILS 628

Query: 363 YIQKGDEDQAMDLFRRMEEK 422
           Y      ++   +F  M EK
Sbjct: 629 YGLAKMVEEGKRMFSSMSEK 648


>gb|EYU38829.1| hypothetical protein MIMGU_mgv1a001151mg [Mimulus guttatus]
          Length = 876

 Score =  242 bits (617), Expect = 6e-62
 Identities = 117/193 (60%), Positives = 149/193 (77%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ GV PN             LK ++KGKE+H + IK+G   DVL+GNSL+++YSKC  
Sbjct: 318 MLLSGVVPNGITVMSAISACSSLKDVRKGKEVHLVAIKLGHGEDVLVGNSLVDMYSKCGK 377

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDS-CIQPNVVTWNVMIS 359
           L++A++ FD++SEKDV++WNSMIGGY QAGYCG A +LF +MQ+S  I PNVVTWNVMI+
Sbjct: 378 LDSARRVFDTMSEKDVYTWNSMIGGYCQAGYCGVAHDLFKQMQESGFILPNVVTWNVMIT 437

Query: 360 GYIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGIL 539
           GYIQ GDED+AMD+F  ME+ G VKR+ A+WN LIAGLL +GQKNKAL  FRQMQ+ G+ 
Sbjct: 438 GYIQNGDEDEAMDMFNTMEKIGGVKRDTATWNALIAGLLDHGQKNKALGIFRQMQSCGVK 497

Query: 540 LNSITVLSVLPAC 578
            NS+TVLS+LPAC
Sbjct: 498 PNSVTVLSILPAC 510



 Score =  119 bits (297), Expect = 8e-25
 Identities = 60/164 (36%), Positives = 97/164 (59%)
 Frame = +3

Query: 87  GKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIGGYAQ 266
           G+ +H + IK+G + ++ + NS++ +Y+KC  L  A++ F+ +   D  SWN+MI GY  
Sbjct: 175 GRLIHGMAIKLGLSRELRVNNSILSVYAKCGLLSLAEKFFERMEVNDRVSWNAMITGYCH 234

Query: 267 AGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLFRRMEEKGPVKRNAA 446
           AG   +A  L   M++  ++P+ +TWNV+IS     G  D A  L   ME  G VK +  
Sbjct: 235 AGQINEAERLIESMKEEGLEPDEITWNVLISSCNHLGKCDVAKKLMNAMETCG-VKPDVF 293

Query: 447 SWNLLIAGLLQNGQKNKALATFRQMQASGILLNSITVLSVLPAC 578
           +W  +I G  QN ++ +A+  FR+M  SG++ N ITV+S + AC
Sbjct: 294 TWTSMILGFAQNNRRLEAVKLFREMLLSGVVPNGITVMSAISAC 337



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/136 (30%), Positives = 67/136 (49%)
 Frame = +3

Query: 15  GVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAA 194
           GV+PN             L A+KK KE+H   +K     ++ + NS+I+ Y+K   +E +
Sbjct: 495 GVKPNSVTVLSILPACANLIAVKKLKEIHCCVVKRSLESELSVANSMIDTYAKAGEIEYS 554

Query: 195 KQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQK 374
           K+ F ++   D+ +WN+M  GY   G   +A ELF  M     +PN  T+  +IS Y   
Sbjct: 555 KKIFANMPSVDIITWNTMTTGYVLHGCADEAIELFEHMTRQECRPNRGTFASVISAYGLA 614

Query: 375 GDEDQAMDLFRRMEEK 422
              ++   +F  M E+
Sbjct: 615 KKVEEGKRVFSNMTEE 630


>ref|XP_006306414.1| hypothetical protein CARUB_v10012347mg [Capsella rubella]
           gi|482575125|gb|EOA39312.1| hypothetical protein
           CARUB_v10012347mg [Capsella rubella]
          Length = 1361

 Score =  239 bits (611), Expect = 3e-61
 Identities = 110/192 (57%), Positives = 145/192 (75%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M + GV PN             LK L  G E+HS+ +K+G   DVL+GNSL+++YSKC  
Sbjct: 343 MFLAGVVPNGVTIMSAVSACSCLKVLNLGSEVHSVAVKMGFIDDVLVGNSLVDMYSKCGE 402

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FDS+  KDV++WNSMI GY QAGYCGKA+ELF KMQD+ ++PN++TWN MISG
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTKMQDANVRPNIITWNTMISG 462

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YI+ GDE +AMDLF+RME+ G V+RN ASWNL+IAG +QNG+K++AL  FR+MQ S  + 
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTASWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 523 NSVTILSLLPAC 534



 Score =  130 bits (326), Expect = 3e-28
 Identities = 65/192 (33%), Positives = 115/192 (59%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++ GK +HS+ IK+G +  + + NS++ +Y+KC +
Sbjct: 172 MMEDGVLPDAFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGD 231

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L++A + F  + E+DV +WNS++  Y Q G   +A  L  +M+   I P +VTWN++I G
Sbjct: 232 LDSATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVRLVEEMEKEGIAPGLVTWNILIGG 291

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  + AM+L ++ME  G +  +  +W  +I+GL+ NG + +AL  FR+M  +G++ 
Sbjct: 292 YNQLGKCEDAMNLMQKMERFG-LTADVFTWTAMISGLIHNGMRFQALDMFRKMFLAGVVP 350

Query: 543 NSITVLSVLPAC 578
           N +T++S + AC
Sbjct: 351 NGVTIMSAVSAC 362



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
 Frame = +3

Query: 132 DVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQ 311
           DV +   L+ +Y+KC  L  A++ FDS+ E+++++W++MIG Y++     +   LF  M 
Sbjct: 114 DVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRWREVSNLFHSMM 173

Query: 312 DSCIQPNVVTW-----------------------------------NVMISGYIQKGDED 386
           +  + P+   +                                   N +++ Y + GD D
Sbjct: 174 EDGVLPDAFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGDLD 233

Query: 387 QAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILLNSIT 554
            A   FRRM+E     R+  +WN ++    QNG+  +A+    +M+  GI    +T
Sbjct: 234 SATKFFRRMKE-----RDVVAWNSVLLAYCQNGKHEEAVRLVEEMEKEGIAPGLVT 284



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 31/112 (27%), Positives = 57/112 (50%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L   K  +E+H   ++        + N+L + Y+K  ++  ++  F  +  KD+ +WNS+
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSRSIFKGMETKDIITWNSL 596

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLF 404
           IGGY   G  G A +LF +M+   I+PN  T + +I  +   G+  +   +F
Sbjct: 597 IGGYVLHGKYGPALDLFNQMKTQGIKPNRGTLSSIILAHGLMGNVVEGKKVF 648


>ref|XP_007017649.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
           [Theobroma cacao] gi|590593723|ref|XP_007017650.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein
           isoform 1 [Theobroma cacao] gi|508722977|gb|EOY14874.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein
           isoform 1 [Theobroma cacao] gi|508722978|gb|EOY14875.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 890

 Score =  239 bits (610), Expect = 4e-61
 Identities = 108/192 (56%), Positives = 144/192 (75%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ G++PN             L+ L  G+E+HSI +K G   +VL+GNSLI++Y+KC  
Sbjct: 341 MLLAGIKPNGVTITSAVSACASLRVLNMGREIHSIALKKGIIDNVLVGNSLIDMYAKCGE 400

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA+Q FD I E+DV++WNSM+ GY QAGYCGKA+ELFMKM++S ++PNV+TWN MISG
Sbjct: 401 LEAARQVFDKIEERDVYTWNSMVAGYCQAGYCGKAYELFMKMRESDLKPNVITWNTMISG 460

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ GDED+AMDLF+RME+ G ++RN ASWN  IAG +Q G+ +KA   FRQMQ+  +  
Sbjct: 461 YIQNGDEDRAMDLFQRMEQDGKIRRNTASWNAFIAGYVQLGEIDKAFGVFRQMQSCSVSS 520

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LP C
Sbjct: 521 NSVTILSILPGC 532



 Score =  127 bits (320), Expect = 2e-27
 Identities = 67/192 (34%), Positives = 112/192 (58%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++ G+ LHS+ I++G      + NS++ +Y+KC  
Sbjct: 170 MMEDGVLPDEILFPKFLQACANCGDVRTGRLLHSLVIRLGMVCFARVSNSVLAVYAKCGK 229

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L +A++ F++++E+D+ +WNSMI  Y Q G   +A+ LF  M    IQP +VTWN++I+ 
Sbjct: 230 LSSARRFFENMNERDIVTWNSMILAYCQKGENDEAYGLFYGMWKDGIQPCLVTWNILINS 289

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AM L + ME    +  +  +W  +I+GL QNG++ +AL  F++M  +GI  
Sbjct: 290 YNQLGQCDVAMGLMKEMEISRIIP-DVFTWTSMISGLAQNGRRWQALCLFKEMLLAGIKP 348

Query: 543 NSITVLSVLPAC 578
           N +T+ S + AC
Sbjct: 349 NGVTITSAVSAC 360



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 38/117 (32%), Positives = 64/117 (54%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L A KK KE+H   ++      + + NSLI+ Y+K  N+  ++  FD +S +D+ SWNS+
Sbjct: 535 LVAAKKVKEIHGCVLRRNLEFVLSISNSLIDTYAKSGNILYSRIIFDGMSTRDIISWNSI 594

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLFRRMEE 419
           IGGY   G    A +LF +M+   ++PN  T+  +I  +   G  D+   +F  + +
Sbjct: 595 IGGYVLHGCSDAALDLFNQMRKLGLKPNRGTFLSIILAHGIAGMVDEGKQIFSSISD 651


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  238 bits (608), Expect = 7e-61
 Identities = 116/192 (60%), Positives = 143/192 (74%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++ GVEPN             LK+L+ G E+H   IK+G   + L+GNSLI++YSKC  
Sbjct: 342 MILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGK 401

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA+  FD+I EKDV++WNSMIGGY QAGY GKA+ELFM++++S + PNVVTWN MISG
Sbjct: 402 LEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISG 461

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
            IQ GDEDQAMDLF+ ME+ G VKRN ASWN LIAG  Q G+KNKALA FRQMQ+     
Sbjct: 462 CIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSP 521

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 522 NSVTILSILPAC 533



 Score =  111 bits (277), Expect = 2e-22
 Identities = 63/192 (32%), Positives = 106/192 (55%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+              + L+  K +HS+ I+ G +  + L NS++  + KC  
Sbjct: 171 MMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGK 230

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F ++ E+D  SWN MI GY Q G   +A  L   M +   +P +VT+N+MI+ 
Sbjct: 231 LSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIAS 290

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q GD D  +DL ++ME  G +  +  +W  +I+G  Q+ + ++AL  F++M  +G+  
Sbjct: 291 YSQLGDCDLVIDLKKKMESVG-LAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEP 349

Query: 543 NSITVLSVLPAC 578
           N+IT+ S   AC
Sbjct: 350 NTITIASATSAC 361



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 38/116 (32%), Positives = 66/116 (56%)
 Frame = +3

Query: 75  ALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIG 254
           A KK KE+H   ++     ++ + NSL++ Y+K  N++ ++  F+ +S KD+ +WNS+I 
Sbjct: 538 AEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIA 597

Query: 255 GYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLFRRMEEK 422
           GY   G    AF+LF +M++  I+PN  T   +I  Y   G  D+   +F  + E+
Sbjct: 598 GYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEE 653


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  238 bits (608), Expect = 7e-61
 Identities = 116/192 (60%), Positives = 143/192 (74%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++ GVEPN             LK+L+ G E+H   IK+G   + L+GNSLI++YSKC  
Sbjct: 342 MILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGK 401

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA+  FD+I EKDV++WNSMIGGY QAGY GKA+ELFM++++S + PNVVTWN MISG
Sbjct: 402 LEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISG 461

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
            IQ GDEDQAMDLF+ ME+ G VKRN ASWN LIAG  Q G+KNKALA FRQMQ+     
Sbjct: 462 CIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSP 521

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 522 NSVTILSILPAC 533



 Score =  111 bits (277), Expect = 2e-22
 Identities = 63/192 (32%), Positives = 106/192 (55%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+              + L+  K +HS+ I+ G +  + L NS++  + KC  
Sbjct: 171 MMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGK 230

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F ++ E+D  SWN MI GY Q G   +A  L   M +   +P +VT+N+MI+ 
Sbjct: 231 LSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIAS 290

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q GD D  +DL ++ME  G +  +  +W  +I+G  Q+ + ++AL  F++M  +G+  
Sbjct: 291 YSQLGDCDLVIDLKKKMESVG-LAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEP 349

Query: 543 NSITVLSVLPAC 578
           N+IT+ S   AC
Sbjct: 350 NTITIASATSAC 361



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 38/116 (32%), Positives = 66/116 (56%)
 Frame = +3

Query: 75  ALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIG 254
           A KK KE+H   ++     ++ + NSL++ Y+K  N++ ++  F+ +S KD+ +WNS+I 
Sbjct: 538 AEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIA 597

Query: 255 GYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLFRRMEEK 422
           GY   G    AF+LF +M++  I+PN  T   +I  Y   G  D+   +F  + E+
Sbjct: 598 GYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEE 653


>ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Solanum tuberosum]
          Length = 884

 Score =  238 bits (607), Expect = 9e-61
 Identities = 111/192 (57%), Positives = 147/192 (76%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++ GV P+             LK L+KG+ELHS+ +K+G  G V++GN+L++LYSKC  
Sbjct: 337 MILNGVTPSEVTLTSTVSACASLKDLRKGRELHSLVVKLGFDGGVIVGNALVDLYSKCGK 396

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA+  FD I EKDV+SWNS+IGGY QAG CGKA++LFMKM +  + PNV+TWNV+I+G
Sbjct: 397 LEAARLVFDMIPEKDVYSWNSLIGGYCQAGCCGKAYDLFMKMHEFDVSPNVITWNVLITG 456

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           ++Q GDEDQA+DLF RME+ G V+R+AASWN LIAG L NGQK+KAL  FR+MQ+ G   
Sbjct: 457 HMQNGDEDQALDLFWRMEKDGNVERDAASWNALIAGYLHNGQKDKALGIFRKMQSFGFKP 516

Query: 543 NSITVLSVLPAC 578
           N++T+LS+LPAC
Sbjct: 517 NTVTILSILPAC 528



 Score =  118 bits (296), Expect = 1e-24
 Identities = 60/192 (31%), Positives = 108/192 (56%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++ G  +HSI I+ G   ++ + NSL+ +Y+KC  
Sbjct: 166 MMGDGVVPDSFLFPKILQACANCGDVETGILIHSIAIRCGMISEIRVNNSLLAVYAKCGL 225

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L+ AK+ F+S   +D  SWNS+I  Y   G   +A  L   M+   ++P ++TWN++I+ 
Sbjct: 226 LDCAKRIFESTEMRDTVSWNSIIMAYCHKGDIVEARRLLNLMRLEGVEPGLITWNILIAS 285

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D+A+++ + ME  G +  +  +W  LI+G+ Q+ + ++AL  FR+M  +G+  
Sbjct: 286 YNQLGRCDEALEVMKEMEGNG-IMPDVFTWTCLISGMSQHNRNSRALELFREMILNGVTP 344

Query: 543 NSITVLSVLPAC 578
           + +T+ S + AC
Sbjct: 345 SEVTLTSTVSAC 356



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 44/136 (32%), Positives = 73/136 (53%)
 Frame = +3

Query: 15  GVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAA 194
           G +PN             L   KK KE+H   ++     ++ + NSLI+ YSK   L+ +
Sbjct: 513 GFKPNTVTILSILPACANLIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGGLQYS 572

Query: 195 KQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQK 374
           K  FD +S KD+ SWN++I GY   G+  +A +LF +M+++ ++PN  T++ MIS Y   
Sbjct: 573 KTIFDGMSTKDIISWNTLIAGYVLHGFSSEATKLFHQMEEAGLKPNRGTFSSMISSYGLA 632

Query: 375 GDEDQAMDLFRRMEEK 422
              ++   +F  M E+
Sbjct: 633 KMVEEGKRMFSSMYEE 648


>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g19720; AltName: Full=Protein DYW7
           gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
           [Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 894

 Score =  238 bits (606), Expect = 1e-60
 Identities = 108/192 (56%), Positives = 146/192 (76%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M + GV PN             LK + +G E+HSI +K+G   DVL+GNSL+++YSKC  
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FDS+  KDV++WNSMI GY QAGYCGKA+ELF +MQD+ ++PN++TWN MISG
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YI+ GDE +AMDLF+RME+ G V+RN A+WNL+IAG +QNG+K++AL  FR+MQ S  + 
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 523 NSVTILSLLPAC 534



 Score =  136 bits (342), Expect = 5e-30
 Identities = 68/192 (35%), Positives = 115/192 (59%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++ GK +HS+ IK+G +  + + NS++ +Y+KC  
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L+ A + F  + E+DV +WNS++  Y Q G   +A EL  +M+   I P +VTWN++I G
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AMDL ++ME  G +  +  +W  +I+GL+ NG + +AL  FR+M  +G++ 
Sbjct: 292 YNQLGKCDAAMDLMQKMETFG-ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350

Query: 543 NSITVLSVLPAC 578
           N++T++S + AC
Sbjct: 351 NAVTIMSAVSAC 362



 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 35/191 (18%)
 Frame = +3

Query: 87  GKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIGGYAQ 266
           G+ LH+    + T  DV +   L+ +Y+KC  +  A++ FDS+ E+++F+W++MIG Y++
Sbjct: 100 GRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158

Query: 267 AG---YCGKAFELFMK---MQDSCIQPNVV-----------------------------T 341
                   K F L MK   + D  + P ++                              
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218

Query: 342 WNVMISGYIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQM 521
            N +++ Y + G+ D A   FRRM E     R+  +WN ++    QNG+  +A+   ++M
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRE-----RDVIAWNSVLLAYCQNGKHEEAVELVKEM 273

Query: 522 QASGILLNSIT 554
           +  GI    +T
Sbjct: 274 EKEGISPGLVT 284



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 33/112 (29%), Positives = 57/112 (50%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L   K  +E+H   ++        + N+L + Y+K  ++E ++  F  +  KD+ +WNS+
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSL 596

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLF 404
           IGGY   G  G A  LF +M+   I PN  T + +I  +   G+ D+   +F
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  238 bits (606), Expect = 1e-60
 Identities = 116/192 (60%), Positives = 141/192 (73%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++  VEPN             LK L +G E+H++ +K+G   DVL+GNSLI++YSKC  
Sbjct: 336 MILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGK 395

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A + FD + EKDV++WNSMIGGY Q GYCGKA  LFMKMQ S  QPN +TWN MI G
Sbjct: 396 LENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWG 455

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YI  GDEDQAMDLFRRMEE G +KR+ ASWN LI+G LQ GQK+KAL+ FRQMQ+  I +
Sbjct: 456 YIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSINI 515

Query: 543 NSITVLSVLPAC 578
           NS+T+LSVLPAC
Sbjct: 516 NSVTILSVLPAC 527



 Score =  124 bits (311), Expect = 2e-26
 Identities = 60/167 (35%), Positives = 100/167 (59%)
 Frame = +3

Query: 78  LKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIGG 257
           +K G+ +HS+ IK G  G   + NS++ +Y+KC  L  A + F+ + + +  +WN++I G
Sbjct: 190 IKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISG 249

Query: 258 YAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLFRRMEEKGPVKR 437
           Y Q G   +A  LF  M++  I+P +V+WN++I+GY Q G  D AM+L ++ME  G    
Sbjct: 250 YCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLG-TSP 308

Query: 438 NAASWNLLIAGLLQNGQKNKALATFRQMQASGILLNSITVLSVLPAC 578
           +  +W  +I+GL QN + +KAL  F  M  + +  N +T+ S + AC
Sbjct: 309 DVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSAC 355


>ref|XP_006473572.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like isoform X2 [Citrus sinensis]
          Length = 1252

 Score =  237 bits (605), Expect = 1e-60
 Identities = 116/192 (60%), Positives = 141/192 (73%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M   GV PN             LKAL  G E+HS+ +K+G T DVL+GNSLI +YSKC  
Sbjct: 340 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 399

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA++ FD I +KDV+SWNSMI GY QAGYCGKA+ELF+KMQ+S + PNV+TWNV+ISG
Sbjct: 400 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 459

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ G+ED+A+DLF+RM +   VKRN ASWN LIAG  Q GQKN AL  FR+MQ+S    
Sbjct: 460 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 519

Query: 543 NSITVLSVLPAC 578
           N +T+LSVLPAC
Sbjct: 520 NCVTILSVLPAC 531



 Score =  121 bits (304), Expect = 1e-25
 Identities = 67/192 (34%), Positives = 109/192 (56%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +G+ P+                 + GK +HS+ IK+G +    + NS++ +Y KC  
Sbjct: 169 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 228

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F+S+ EKD  +WNSMI GY Q G   +A  LF KM    I+  VVT+N++I  
Sbjct: 229 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 288

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AM++ ++ME  G +  +  +W  +I+G  QNG+ ++AL  F++M   G++ 
Sbjct: 289 YNQLGQCDVAMEMVKKMESLG-ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 347

Query: 543 NSITVLSVLPAC 578
           N +T+ S + AC
Sbjct: 348 NGVTITSAISAC 359



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L A  K KE+H   ++      + + NSLI+ Y+K  N+  ++  FD +S KD+ +WNS+
Sbjct: 534 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 593

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTW-NVMISGYIQKGDEDQ 389
           I GY   G+   A +LF +M+   ++PN  T+ +++++  +   D D+
Sbjct: 594 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLSFEDSDK 641


>ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citrus clementina]
           gi|557537195|gb|ESR48313.1| hypothetical protein
           CICLE_v10000229mg [Citrus clementina]
          Length = 889

 Score =  237 bits (605), Expect = 1e-60
 Identities = 116/192 (60%), Positives = 141/192 (73%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M   GV PN             LKAL  G E+HS+ +K+G T DVL+GNSLI +YSKC  
Sbjct: 340 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 399

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA++ FD I +KDV+SWNSMI GY QAGYCGKA+ELF+KMQ+S + PNV+TWNV+ISG
Sbjct: 400 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 459

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ G+ED+A+DLF+RM +   VKRN ASWN LIAG  Q GQKN AL  FR+MQ+S    
Sbjct: 460 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 519

Query: 543 NSITVLSVLPAC 578
           N +T+LSVLPAC
Sbjct: 520 NCVTILSVLPAC 531



 Score =  122 bits (307), Expect = 5e-26
 Identities = 68/192 (35%), Positives = 109/192 (56%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +G+ P+                 + GK +HS+ IK+G +    + NS++ +Y KC  
Sbjct: 169 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 228

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F+S+ EKD  +WNSMI GY Q G   +A  LF KM    I+  VVT+N++I  
Sbjct: 229 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 288

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AM++ +RME  G +  +  +W  +I+G  QNG+ ++AL  F++M   G++ 
Sbjct: 289 YNQLGQCDVAMEMVKRMESLG-ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 347

Query: 543 NSITVLSVLPAC 578
           N +T+ S + AC
Sbjct: 348 NGVTITSAISAC 359



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 62/117 (52%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L A  K KE+H   ++      + + NSLI+ Y+K  N+  ++  FD +S KD+ +WNS+
Sbjct: 534 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDEMSSKDIITWNSL 593

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLFRRMEE 419
           I GY   G+   A +LF +M+   ++PN  T+  +I  +   G  D    +F  + E
Sbjct: 594 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKQVFCSITE 650


>ref|XP_007227217.1| hypothetical protein PRUPE_ppa019183mg [Prunus persica]
           gi|462424153|gb|EMJ28416.1| hypothetical protein
           PRUPE_ppa019183mg [Prunus persica]
          Length = 882

 Score =  237 bits (604), Expect = 2e-60
 Identities = 112/192 (58%), Positives = 145/192 (75%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ GV+PN             LK+L +G E++S+ IK+G   DVL+GNSLI+++SKC  
Sbjct: 334 MLLAGVQPNGITITSAISACTSLKSLNQGLEIYSLAIKMGFIDDVLVGNSLIDMFSKCGE 393

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           +EAA++ F  I +KDV++WNSMIGGY QA YCGKA+ELF KMQ+S + PN VTWNVMI+G
Sbjct: 394 VEAAQKIFSMIPDKDVYTWNSMIGGYCQAKYCGKAYELFTKMQESDVHPNAVTWNVMITG 453

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y+Q GD DQAMDLF+RME+ G +KRN ASWN L++G LQ G+KNKA   FRQMQA  +  
Sbjct: 454 YMQNGDADQAMDLFQRMEKDGKIKRNTASWNSLVSGYLQLGEKNKAFGVFRQMQAYCVNP 513

Query: 543 NSITVLSVLPAC 578
           NS+T+LSVLP+C
Sbjct: 514 NSVTILSVLPSC 525



 Score =  124 bits (311), Expect = 2e-26
 Identities = 65/192 (33%), Positives = 108/192 (56%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++  K +HSI ++   T  + + NS++ +Y+KC  
Sbjct: 163 MMKDGVLPDYFLFPKILQACGNCSNIEATKLIHSIAVRCNLTSCIHVNNSILAVYAKCGI 222

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FD++ E+D  SWN++I GY   G   +A  LF  M    I+P +VTWN +I+ 
Sbjct: 223 LEWARRFFDNMDERDGVSWNAIISGYCHKGESEEARRLFDAMSKEGIEPGLVTWNTLIAS 282

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           + Q    D AM+L RRME  G +  +  +W  +I+G  QN +K+++L  F++M  +G+  
Sbjct: 283 HNQLRHCDVAMELMRRMESCG-ITPDVYTWTSMISGFAQNNRKHQSLDFFKKMLLAGVQP 341

Query: 543 NSITVLSVLPAC 578
           N IT+ S + AC
Sbjct: 342 NGITITSAISAC 353



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 42/134 (31%), Positives = 66/134 (49%)
 Frame = +3

Query: 18  VEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK 197
           V PN             L A+KK KE+H   ++     ++ + N+LI+ Y+K  N+  ++
Sbjct: 511 VNPNSVTILSVLPSCANLVAMKKVKEIHGSVLRRNLESEIPVANALIDTYAKSGNIAYSR 570

Query: 198 QAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKG 377
             FD++S KD  +WNS I GY   G    A +LF +M+ S  +PN  T+  +I  Y   G
Sbjct: 571 IIFDTMSSKDTITWNSAISGYVLHGRSDVALDLFDQMKKSGFEPNRGTFANIIHAYSLAG 630

Query: 378 DEDQAMDLFRRMEE 419
             D+    F  + E
Sbjct: 631 KVDEGTQAFHSITE 644


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
           ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score =  236 bits (602), Expect = 3e-60
 Identities = 108/192 (56%), Positives = 144/192 (75%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M + GV PN             LK +  G E+HSI +K+G   DVL+GNSL+++YSKC  
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FDS+  KDV++WNSMI GY QAGYCGKA+ELF +MQD+ ++PN++TWN MISG
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISG 462

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YI+ GDE +AMDLF+RME+ G V+RN A+WNL+IAG +QNG+K+ AL  FR+MQ S  + 
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMP 522

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 523 NSVTILSLLPAC 534



 Score =  134 bits (337), Expect = 2e-29
 Identities = 68/192 (35%), Positives = 114/192 (59%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ EGV P+                ++ GK +HS+ IK+G +  + + NS++ +Y+KC  
Sbjct: 172 MMEEGVLPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
            + A + F  + E+DV +WNS++  Y Q G   +A EL  +M+   I P +VTWN++I G
Sbjct: 232 WDFATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGG 291

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AMDL ++ME  G +  +  +W  +I+GL+ NG + +AL  FR+M  +G++ 
Sbjct: 292 YNQLGKCDAAMDLMQKMENFG-ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350

Query: 543 NSITVLSVLPAC 578
           N++T++S + AC
Sbjct: 351 NAVTIMSAVSAC 362



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/112 (30%), Positives = 58/112 (51%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L   K  +E+H   ++        + N+L + Y+K  ++  +K  F  +  KD+ +WNS+
Sbjct: 537 LLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKDIITWNSL 596

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLF 404
           IGGY   G  G A ELF +M+   I+PN  T + +I  +   G+ D+   +F
Sbjct: 597 IGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKVF 648


>ref|XP_007226562.1| hypothetical protein PRUPE_ppa024458mg [Prunus persica]
           gi|462423498|gb|EMJ27761.1| hypothetical protein
           PRUPE_ppa024458mg [Prunus persica]
          Length = 568

 Score =  236 bits (601), Expect = 4e-60
 Identities = 111/192 (57%), Positives = 144/192 (75%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           ML+ GV+PN             LK+L +G E++S+ IK+G   DVL+GNSLI+++SKC  
Sbjct: 277 MLLAGVQPNGITITSAISACTSLKSLNQGLEIYSLAIKMGCIDDVLVGNSLIDMFSKCGE 336

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           +EAA++ F  I EKDV++WNSMIGGY QA YCGKA+ELF KMQ+S + PN VTWNVMI+G
Sbjct: 337 VEAAQKVFSMIPEKDVYTWNSMIGGYCQAKYCGKAYELFTKMQESDVHPNAVTWNVMITG 396

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y+Q GD DQAMDLF++ME+ G +KRN ASWN L++G LQ G+KNK    FRQMQA  +  
Sbjct: 397 YMQNGDADQAMDLFQKMEKDGKIKRNTASWNSLVSGYLQLGEKNKPFGVFRQMQAYCVNP 456

Query: 543 NSITVLSVLPAC 578
           NS+T+LSVLP+C
Sbjct: 457 NSVTILSVLPSC 468



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 56/198 (28%)
 Frame = +3

Query: 153 LIELYSKCWNLEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQD------ 314
           L+ +Y+KC  L+ A++ F ++ E+++++W++MIG   +     +  ELF  M        
Sbjct: 100 LVSMYAKCGFLDDARKVFHAMRERNLYAWSAMIGACLRDQRWKEVVELFFSMMKDGVFPD 159

Query: 315 ---------------------------------SCIQPNV-------VTWNVMISGYIQK 374
                                            SCI  N        V+WN +ISGY  K
Sbjct: 160 YFLFPKILQACGNCSNIEATKLIHSIAVRCNLTSCIHVNNSILARDGVSWNAIISGYCHK 219

Query: 375 GDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGI-----L 539
           G+ ++A  LF  M ++G ++    +WN LIA   Q    + A+   R+M++ GI     L
Sbjct: 220 GESEEARRLFDAMSKEG-IEPGLVTWNTLIASHNQLRHCDVAMELMRRMESCGITPDKML 278

Query: 540 L-----NSITVLSVLPAC 578
           L     N IT+ S + AC
Sbjct: 279 LAGVQPNGITITSAISAC 296



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 36/105 (34%), Positives = 55/105 (52%)
 Frame = +3

Query: 18  VEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK 197
           V PN             L A+KK KE+H   ++     ++ + NSLI+ Y+K  N+  ++
Sbjct: 454 VNPNSVTILSVLPSCANLVAMKKVKEIHGSVLRRNLESEIPVANSLIDTYAKSGNIAYSR 513

Query: 198 QAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPN 332
             FD++S KD  +WNS I GY   G    A +LF +M+ S  +PN
Sbjct: 514 IIFDTMSSKDTITWNSAISGYVLHGRSDVALDLFDQMKKSGFKPN 558



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
 Frame = +3

Query: 81  KKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK---------------QAFDSI 215
           K+  EL    +K G   D  L   +++    C N+EA K                  +SI
Sbjct: 142 KEVVELFFSMMKDGVFPDYFLFPKILQACGNCSNIEATKLIHSIAVRCNLTSCIHVNNSI 201

Query: 216 SEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAM 395
             +D  SWN++I GY   G   +A  LF  M    I+P +VTWN +I+ + Q    D AM
Sbjct: 202 LARDGVSWNAIISGYCHKGESEEARRLFDAMSKEGIEPGLVTWNTLIASHNQLRHCDVAM 261

Query: 396 DLFRRMEEKGPVKRNAASWNLLIAGLLQNG 485
           +L RRME  G          +L+AG+  NG
Sbjct: 262 ELMRRMESCG-----ITPDKMLLAGVQPNG 286


>ref|XP_004301846.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Fragaria vesca subsp. vesca]
          Length = 892

 Score =  235 bits (600), Expect = 6e-60
 Identities = 114/192 (59%), Positives = 146/192 (76%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++ GV PN             LK+L KG E+++  +KIG T DVL+GNSLI+++SKC +
Sbjct: 336 MILLGVLPNGITIASAILACTSLKSLTKGLEVYAFAVKIGLTDDVLVGNSLIDMFSKCGD 395

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LEAA+Q F+ +SEKDV+SWNSMIGGY QA YCGKA+ELFMKMQ+S ++PN +T+NVMI+G
Sbjct: 396 LEAAEQVFNVMSEKDVYSWNSMIGGYCQARYCGKAYELFMKMQESDVRPNAITYNVMITG 455

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ GD DQAMDLF+ ME  G VKRN ASWN LIAG  Q G+ N+AL  FR+MQ  G+  
Sbjct: 456 YIQNGDADQAMDLFQMMERDGKVKRNTASWNSLIAGYAQLGEINEALRIFRKMQTFGVSP 515

Query: 543 NSITVLSVLPAC 578
           N++T+LS+LPAC
Sbjct: 516 NAVTLLSILPAC 527



 Score =  119 bits (298), Expect = 6e-25
 Identities = 63/192 (32%), Positives = 108/192 (56%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                    + +HS+ ++ G  G++ + N+L+ +Y+KC  
Sbjct: 165 MVRDGVLPDWFLVPKVLQACGNCGDFAAARMVHSMVVRSGLIGNLRVSNALLAVYAKCGE 224

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE+A++ FD +  +D  SWNS++ GY Q G   +A  L  +M    I+P +VTWN++IS 
Sbjct: 225 LESARRFFDKMEVRDGVSWNSIVSGYCQNGDNVEARRLIDEMIRQGIEPGLVTWNILISS 284

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
             + G  D AM+L ++ME  G +  +  +W  +I+G  QN + N+AL  +++M   G+L 
Sbjct: 285 CNKSGQCDVAMELMKKMESCGIIP-DVYTWTAMISGFAQNNRTNQALDLWKKMILLGVLP 343

Query: 543 NSITVLSVLPAC 578
           N IT+ S + AC
Sbjct: 344 NGITIASAILAC 355



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 38/117 (32%), Positives = 62/117 (52%)
 Frame = +3

Query: 15  GVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAA 194
           GV PN             L A+KK KE+H    +     ++ + NSLI+ Y+K  N+E +
Sbjct: 512 GVSPNAVTLLSILPACASLAAMKKVKEIHGSVFRRNLEFELPVANSLIDTYAKSGNIEYS 571

Query: 195 KQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGY 365
           +  FD ++ KD+ +WNS I GY   G+   A +LF +M+   ++PN  T+  ++  Y
Sbjct: 572 RTIFDRMASKDIITWNSAISGYVLHGHPDVALDLFDRMKQLGLKPNRGTFAAVLYAY 628


>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344175|gb|ERP63997.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 810

 Score =  234 bits (596), Expect = 2e-59
 Identities = 114/192 (59%), Positives = 141/192 (73%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M++ GVEPN             LK L  G  +HS+ +K+    DVL+GNSLI++YSKC  
Sbjct: 259 MILAGVEPNGVTITSALSACASLKVLNTGLGIHSLAVKMSFVNDVLVGNSLIDMYSKCGQ 318

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L AA+  FD +SEKD+++WNSMIGGY QAGYCGKA+ LF KMQ S +QPNVVTWN MISG
Sbjct: 319 LGAAQLVFDLMSEKDLYTWNSMIGGYCQAGYCGKAYVLFTKMQKSQVQPNVVTWNTMISG 378

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YIQ GDEDQAMDLF RME++G +KR+ ASWN LIAG +Q  +K+KAL  FRQMQ+  I  
Sbjct: 379 YIQSGDEDQAMDLFHRMEKEGEIKRDNASWNSLIAGFMQIRKKDKALGIFRQMQSFCISP 438

Query: 543 NSITVLSVLPAC 578
           N +T+LS+LPAC
Sbjct: 439 NPVTILSMLPAC 450



 Score =  130 bits (328), Expect = 2e-28
 Identities = 65/192 (33%), Positives = 109/192 (56%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ + V P+              + +K G+ LHS  ++ G      + NS++ +YSKC  
Sbjct: 88  MMKDNVLPDGFLLPKILQAVGNCRDVKTGELLHSFVVRCGMGSSPRVNNSILAVYSKCGK 147

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A++ F+S+ E+D+ +WN+M+ GY   G   +A  LF  M +  I+P +VTWN++I+G
Sbjct: 148 LSLARRFFESMDERDIVAWNAMMSGYCLKGEVEEAHRLFDAMCEEGIEPGLVTWNILIAG 207

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y QKG  D AM+L ++M   G V  +  +W  +I+G  QN +  +AL  +++M  +G+  
Sbjct: 208 YNQKGQCDVAMNLMKKMVSFG-VSPDVVAWTSMISGFAQNNRNGQALDLYKEMILAGVEP 266

Query: 543 NSITVLSVLPAC 578
           N +T+ S L AC
Sbjct: 267 NGVTITSALSAC 278



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 62/134 (46%)
 Frame = +3

Query: 18  VEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAK 197
           + PN             L ALKK KE+H   ++      + + NSLI+ Y+K   +E ++
Sbjct: 436 ISPNPVTILSMLPACASLVALKKVKEIHGCVLRRNLVSVLSISNSLIDTYAKSGKIEYSR 495

Query: 198 QAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKG 377
             FD I  KD  + NSMI GY   G    A  L  +M++  ++PN  T   +I  +   G
Sbjct: 496 AIFDRIPSKDFITVNSMITGYVLHGCSDSALGLLDQMRELGLKPNRGTLVNIILAHSLAG 555

Query: 378 DEDQAMDLFRRMEE 419
             D+   +F  M E
Sbjct: 556 MVDEGRQVFSSMTE 569


>ref|XP_006416469.1| hypothetical protein EUTSA_v10006756mg [Eutrema salsugineum]
           gi|557094240|gb|ESQ34822.1| hypothetical protein
           EUTSA_v10006756mg [Eutrema salsugineum]
          Length = 893

 Score =  233 bits (593), Expect = 4e-59
 Identities = 108/192 (56%), Positives = 142/192 (73%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M + GV PN             LK L  G E+HSI +K+G   DVL+GNSL+++YSKC  
Sbjct: 343 MFLAGVVPNGVTIMSAVSACSCLKVLNLGSEVHSIAVKMGFMDDVLVGNSLVDMYSKCGK 402

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           LE A++ FDS+  KDV++WNSMI GY  A YCGKA+ELF +MQD+ ++PN++TWN MISG
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCHAEYCGKAYELFTRMQDANVKPNIITWNTMISG 462

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           YI+ GDE +AMDLF+RME+ G V+RN ASWNL+IAG +QNG+K++AL  FR+MQ S    
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTASWNLIIAGYIQNGKKDEALELFRKMQFSRFTP 522

Query: 543 NSITVLSVLPAC 578
           NS+T+LS+LPAC
Sbjct: 523 NSVTILSLLPAC 534



 Score =  139 bits (349), Expect = 7e-31
 Identities = 71/192 (36%), Positives = 115/192 (59%)
 Frame = +3

Query: 3   MLMEGVEPNXXXXXXXXXXXXXLKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWN 182
           M+ +GV P+                ++ GK +HS+ IK+G T  + + NS++ +Y+KC  
Sbjct: 172 MMGDGVLPDDFLLPKILQGCANCGDVETGKLIHSVVIKLGMTSCLRVSNSILAVYAKCGE 231

Query: 183 LEAAKQAFDSISEKDVFSWNSMIGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISG 362
           L  A + F  + E+DV +WNS++  Y Q G   +A EL  +M+   I P +VTWN++I G
Sbjct: 232 LSLATKFFRRMEERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGG 291

Query: 363 YIQKGDEDQAMDLFRRMEEKGPVKRNAASWNLLIAGLLQNGQKNKALATFRQMQASGILL 542
           Y Q G  D AMDL ++ME  G V  +  +W  +I+GL+ NG++ +AL TFR+M  +G++ 
Sbjct: 292 YNQLGKCDAAMDLMQKMESFG-VTADVFTWTAMISGLIHNGKRYQALDTFRRMFLAGVVP 350

Query: 543 NSITVLSVLPAC 578
           N +T++S + AC
Sbjct: 351 NGVTIMSAVSAC 362



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 34/112 (30%), Positives = 59/112 (52%)
 Frame = +3

Query: 69  LKALKKGKELHSIGIKIGTTGDVLLGNSLIELYSKCWNLEAAKQAFDSISEKDVFSWNSM 248
           L A K  +E+H   ++        + N+L + Y+K  ++  A+  F  +  KD+ +WNS+
Sbjct: 537 LLATKMVREIHGCVLRRNLDAVHAVKNALTDTYAKSGDIAYARTIFKGMETKDIITWNSL 596

Query: 249 IGGYAQAGYCGKAFELFMKMQDSCIQPNVVTWNVMISGYIQKGDEDQAMDLF 404
           IGGY   G  G A +LF +M+   I+PN  T + +I  +   G+ D+   +F
Sbjct: 597 IGGYVLHGRYGPALDLFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKVF 648