BLASTX nr result
ID: Cocculus23_contig00048743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00048743
(271 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 86 4e-15
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 86 4e-15
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 86 5e-15
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 86 5e-15
ref|XP_006367455.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 85 9e-15
ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 85 9e-15
ref|XP_007146306.1| hypothetical protein PHAVU_006G029300g [Phas... 85 9e-15
ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 85 9e-15
gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Moru... 85 1e-14
ref|XP_006389848.1| hypothetical protein EUTSA_v10018086mg [Eutr... 85 1e-14
ref|XP_006300681.1| hypothetical protein CARUB_v10019722mg, part... 85 1e-14
ref|NP_178208.1| MIF4G and MA3 domain-containing protein [Arabi... 85 1e-14
ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arab... 85 1e-14
ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citr... 84 2e-14
ref|XP_006423263.1| hypothetical protein CICLE_v10027820mg [Citr... 84 2e-14
ref|XP_007052199.1| MIF4G domain-containing protein / MA3 domain... 84 2e-14
ref|XP_007052197.1| MIF4G domain-containing protein / MA3 domain... 84 2e-14
ref|XP_007052196.1| MIF4G domain-containing protein / MA3 domain... 84 2e-14
ref|XP_007052194.1| MIF4G domain-containing protein / MA3 domain... 84 2e-14
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 84 2e-14
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = +3
Query: 72 ALMM---QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCR 242
A+MM Q++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR
Sbjct: 295 AMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCR 354
Query: 243 ACLKSQMAS 269
+C+KSQMAS
Sbjct: 355 SCMKSQMAS 363
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1
[Glycine max] gi|571473788|ref|XP_006586031.1|
PREDICTED: pre-mRNA-splicing factor CWC22 homolog
isoform X2 [Glycine max]
Length = 871
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = +3
Query: 72 ALMM---QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCR 242
A+MM Q++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR
Sbjct: 311 AMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCR 370
Query: 243 ACLKSQMAS 269
+C+KSQMAS
Sbjct: 371 SCMKSQMAS 379
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 238 VQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQ 297
Query: 261 MAS 269
MAS
Sbjct: 298 MAS 300
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 238 VQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQ 297
Query: 261 MAS 269
MAS
Sbjct: 298 MAS 300
>ref|XP_006367455.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
tuberosum]
Length = 757
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QR++WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 371 VQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRGRGLFCRSCMKSQ 430
Query: 261 MAS 269
MAS
Sbjct: 431 MAS 433
>ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
tuberosum]
Length = 951
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QR++WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 399 VQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRGRGLFCRSCMKSQ 458
Query: 261 MAS 269
MAS
Sbjct: 459 MAS 461
>ref|XP_007146306.1| hypothetical protein PHAVU_006G029300g [Phaseolus vulgaris]
gi|561019529|gb|ESW18300.1| hypothetical protein
PHAVU_006G029300g [Phaseolus vulgaris]
Length = 866
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = +3
Query: 72 ALMM---QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCR 242
A+MM Q++S E+QRL+WDALRKSINGL PELF+ENLIRGRGLFCR
Sbjct: 303 AMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFSENLIRGRGLFCR 362
Query: 243 ACLKSQMAS 269
+C+KSQMAS
Sbjct: 363 SCMKSQMAS 371
>ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
lycopersicum]
Length = 860
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QR++WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 308 VQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRGRGLFCRSCMKSQ 367
Query: 261 MAS 269
MAS
Sbjct: 368 MAS 370
>gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Morus notabilis]
Length = 850
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QRL+WDALRKSINGL PELF+ENLIRGRGLFCR+C+KSQ
Sbjct: 291 VQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFSENLIRGRGLFCRSCMKSQ 350
Query: 261 MAS 269
MAS
Sbjct: 351 MAS 353
>ref|XP_006389848.1| hypothetical protein EUTSA_v10018086mg [Eutrema salsugineum]
gi|557086282|gb|ESQ27134.1| hypothetical protein
EUTSA_v10018086mg [Eutrema salsugineum]
Length = 935
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
++++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 379 VEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQ 438
Query: 261 MAS 269
MAS
Sbjct: 439 MAS 441
>ref|XP_006300681.1| hypothetical protein CARUB_v10019722mg, partial [Capsella rubella]
gi|482569391|gb|EOA33579.1| hypothetical protein
CARUB_v10019722mg, partial [Capsella rubella]
Length = 980
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
++++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 426 VEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQ 485
Query: 261 MAS 269
MAS
Sbjct: 486 MAS 488
>ref|NP_178208.1| MIF4G and MA3 domain-containing protein [Arabidopsis thaliana]
gi|6503305|gb|AAF14681.1|AC011713_29 Contains similarity
to gb|U19615 LET 858 gene from Caenorhabditis elegans.
ESTs gb|AI995150, gb|H76674 and gb|R84035 come from this
gene [Arabidopsis thaliana] gi|22654971|gb|AAM98078.1|
At1g80930/F23A5_23 [Arabidopsis thaliana]
gi|28416525|gb|AAO42793.1| At1g80930/F23A5_23
[Arabidopsis thaliana] gi|332198347|gb|AEE36468.1| MIF4G
and MA3 domain-containing protein [Arabidopsis thaliana]
Length = 900
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
++++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 346 VEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQ 405
Query: 261 MAS 269
MAS
Sbjct: 406 MAS 408
>ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arabidopsis lyrata subsp.
lyrata] gi|297333644|gb|EFH64062.1| hypothetical protein
ARALYDRAFT_895889 [Arabidopsis lyrata subsp. lyrata]
Length = 897
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
++++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 343 VEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQ 402
Query: 261 MAS 269
MAS
Sbjct: 403 MAS 405
>ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
gi|568867638|ref|XP_006487141.1| PREDICTED:
pre-mRNA-splicing factor CWC22 homolog [Citrus sinensis]
gi|557525198|gb|ESR36504.1| hypothetical protein
CICLE_v10027820mg [Citrus clementina]
Length = 832
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
++++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 269 VEDKSSAEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQ 328
Query: 261 MAS 269
MAS
Sbjct: 329 MAS 331
>ref|XP_006423263.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
gi|557525197|gb|ESR36503.1| hypothetical protein
CICLE_v10027820mg [Citrus clementina]
Length = 709
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
++++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQ
Sbjct: 269 VEDKSSAEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQ 328
Query: 261 MAS 269
MAS
Sbjct: 329 MAS 331
>ref|XP_007052199.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 6 [Theobroma cacao] gi|508704460|gb|EOX96356.1|
MIF4G domain-containing protein / MA3 domain-containing
protein isoform 6 [Theobroma cacao]
Length = 855
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +3
Query: 84 QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQM 263
+++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQM
Sbjct: 338 EDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQM 397
Query: 264 AS 269
AS
Sbjct: 398 AS 399
>ref|XP_007052197.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 4 [Theobroma cacao]
gi|590723489|ref|XP_007052198.1| MIF4G domain-containing
protein / MA3 domain-containing protein isoform 4
[Theobroma cacao] gi|508704458|gb|EOX96354.1| MIF4G
domain-containing protein / MA3 domain-containing
protein isoform 4 [Theobroma cacao]
gi|508704459|gb|EOX96355.1| MIF4G domain-containing
protein / MA3 domain-containing protein isoform 4
[Theobroma cacao]
Length = 901
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +3
Query: 84 QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQM 263
+++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQM
Sbjct: 338 EDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQM 397
Query: 264 AS 269
AS
Sbjct: 398 AS 399
>ref|XP_007052196.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 3 [Theobroma cacao] gi|508704457|gb|EOX96353.1|
MIF4G domain-containing protein / MA3 domain-containing
protein isoform 3 [Theobroma cacao]
Length = 990
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +3
Query: 84 QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQM 263
+++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQM
Sbjct: 427 EDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQM 486
Query: 264 AS 269
AS
Sbjct: 487 AS 488
>ref|XP_007052194.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 1 [Theobroma cacao]
gi|590723479|ref|XP_007052195.1| MIF4G domain-containing
protein / MA3 domain-containing protein isoform 1
[Theobroma cacao] gi|508704455|gb|EOX96351.1| MIF4G
domain-containing protein / MA3 domain-containing
protein isoform 1 [Theobroma cacao]
gi|508704456|gb|EOX96352.1| MIF4G domain-containing
protein / MA3 domain-containing protein isoform 1
[Theobroma cacao]
Length = 1011
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +3
Query: 84 QEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQM 263
+++S E+QRL+WDALRKSINGL PELFAENLIRGRGLFCR+C+KSQM
Sbjct: 448 EDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQM 507
Query: 264 AS 269
AS
Sbjct: 508 AS 509
>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
Length = 785
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3
Query: 81 MQEESDYEFQRLSWDALRKSINGLXXXXXXXXXXXXXPELFAENLIRGRGLFCRACLKSQ 260
+Q++S E+QRL+WDALRKSINGL PELF ENLIRGRGLFCR+C+KSQ
Sbjct: 221 VQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFGENLIRGRGLFCRSCMKSQ 280
Query: 261 MAS 269
MAS
Sbjct: 281 MAS 283