BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00048687
         (380 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    59   4e-07
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          57   2e-06

>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
           gi|565672276|gb|AHC13194.1| polyprotein [Citrus
           endogenous pararetrovirus]
          Length = 1812

 Score = 59.3 bits (142), Expect(2) = 4e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -1

Query: 200 PIHSFTSSGSNVYHARVNGHFIWDVSVSGHCDPNCNC 90
           PI  FTS+G  VY A+ NGHF+WDV  SGHCDP+C C
Sbjct: 339 PITGFTSNGFPVYPAKQNGHFLWDVPGSGHCDPDCPC 375



 Score = 20.4 bits (41), Expect(2) = 4e-07
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 333 DGTVKITYERTASSP 289
           DGTV++T++   S+P
Sbjct: 300 DGTVRMTFKPPPSAP 314


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 56.6 bits (135), Expect(2) = 2e-06
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -1

Query: 200 PIHSFTSSGSNVYHARVNGHFIWDVSVSGHCDPNCNC 90
           PI  F S G  VY A+ NGHF+WDV  SGHCDP+C C
Sbjct: 339 PITGFNSDGFLVYPAKQNGHFLWDVPGSGHCDPDCPC 375



 Score = 20.4 bits (41), Expect(2) = 2e-06
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 333 DGTVKITYERTASSP 289
           DGTV++T++   S+P
Sbjct: 300 DGTVRMTFKPPPSAP 314