BLASTX nr result
ID: Cocculus23_contig00048641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00048641 (257 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat... 135 8e-30 ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat... 135 8e-30 ref|XP_007031200.1| Tetratricopeptide repeat (TPR)-like superfam... 129 4e-28 ref|XP_006472235.1| PREDICTED: putative pentatricopeptide repeat... 128 9e-28 ref|XP_006382363.1| hypothetical protein POPTR_0005s01440g [Popu... 126 3e-27 emb|CBI39620.3| unnamed protein product [Vitis vinifera] 126 4e-27 ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat... 126 4e-27 ref|XP_006433564.1| hypothetical protein CICLE_v10000630mg [Citr... 125 8e-27 ref|XP_003591223.1| Pentatricopeptide repeat-containing protein ... 124 1e-26 ref|XP_002318941.2| pentatricopeptide repeat-containing family p... 121 1e-25 ref|XP_004304909.1| PREDICTED: putative pentatricopeptide repeat... 120 3e-25 ref|XP_002512535.1| pentatricopeptide repeat-containing protein,... 119 3e-25 gb|EXB53013.1| hypothetical protein L484_018897 [Morus notabilis] 119 4e-25 ref|XP_006392413.1| hypothetical protein EUTSA_v10024029mg [Eutr... 114 1e-23 ref|XP_006301338.1| hypothetical protein CARUB_v10021748mg, part... 114 1e-23 ref|NP_176050.1| pentatricopeptide repeat protein PGN [Arabidops... 114 1e-23 ref|XP_007208505.1| hypothetical protein PRUPE_ppa026465mg, part... 114 2e-23 ref|XP_002891984.1| pentatricopeptide repeat-containing protein ... 114 2e-23 ref|XP_004495637.1| PREDICTED: putative pentatricopeptide repeat... 112 5e-23 ref|XP_006344789.1| PREDICTED: putative pentatricopeptide repeat... 112 7e-23 >ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570-like [Cucumis sativus] Length = 594 Score = 135 bits (339), Expect = 8e-30 Identities = 63/85 (74%), Positives = 72/85 (84%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 ++LITWNT+IAG+ERS S +SL LF Q+GSEG PNCFTFTS AAC NLAVL+CGQQVH Sbjct: 275 KNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVH 334 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGI++RG NVAL NSLIDMYAKC Sbjct: 335 GGIVRRGFDKNVALINSLIDMYAKC 359 Score = 70.9 bits (172), Expect = 2e-10 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Frame = +2 Query: 11 ITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+IAGF G + L F Q+ E + PN F+F+ AA AC +++ +CG+Q+H Sbjct: 177 VSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAA 236 Query: 188 IIQRGIGANVALANSLIDMYAKC 256 + + G+ + + NS++DMY +C Sbjct: 237 VTKYGLHCDAPVMNSILDMYCRC 259 Score = 62.8 bits (151), Expect = 5e-08 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++TW MI GF H++ +F ++ + PN FT +S AC + L+CG Sbjct: 72 RDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALA 131 Query: 179 HGGIIQRGIGANVALANSLIDMYA 250 H + GI +V + N+L+DMYA Sbjct: 132 HSLATKHGIDRSVYVQNALLDMYA 155 >ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570-like [Cucumis sativus] Length = 606 Score = 135 bits (339), Expect = 8e-30 Identities = 63/85 (74%), Positives = 72/85 (84%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 ++LITWNT+IAG+ERS S +SL LF Q+GSEG PNCFTFTS AAC NLAVL+CGQQVH Sbjct: 275 KNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVH 334 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGI++RG NVAL NSLIDMYAKC Sbjct: 335 GGIVRRGFDKNVALINSLIDMYAKC 359 Score = 70.9 bits (172), Expect = 2e-10 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Frame = +2 Query: 11 ITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+IAGF G + L F Q+ E + PN F+F+ AA AC +++ +CG+Q+H Sbjct: 177 VSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAA 236 Query: 188 IIQRGIGANVALANSLIDMYAKC 256 + + G+ + + NS++DMY +C Sbjct: 237 VTKYGLHCDAPVMNSILDMYCRC 259 Score = 62.8 bits (151), Expect = 5e-08 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++TW MI GF H++ +F ++ + PN FT +S AC + L+CG Sbjct: 72 RDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALA 131 Query: 179 HGGIIQRGIGANVALANSLIDMYA 250 H + GI +V + N+L+DMYA Sbjct: 132 HSLATKHGIDRSVYVQNALLDMYA 155 >ref|XP_007031200.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao] gi|508719805|gb|EOY11702.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao] Length = 605 Score = 129 bits (324), Expect = 4e-28 Identities = 59/85 (69%), Positives = 72/85 (84%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 ++LITWNT+IAG+ER S +SL++F Q+ SEG SPN FTFTS AAC NLAVLNCGQQVH Sbjct: 274 KNLITWNTLIAGYERQDSKESLNVFSQMESEGFSPNSFTFTSITAACANLAVLNCGQQVH 333 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGI++RG+ N+ LAN+LIDMYAKC Sbjct: 334 GGIVRRGLQGNLVLANALIDMYAKC 358 Score = 69.7 bits (169), Expect = 4e-10 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 2/87 (2%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHK--SLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQ 175 RD++ W MIAG+ S H+ + +FC++ + G+ PN FT +S AC ++ L CG Sbjct: 71 RDVVMWTAMIAGYT-SCDHQVHAWTVFCEMVNNGVKPNAFTLSSVLKACKSMQCLACGGL 129 Query: 176 VHGGIIQRGIGANVALANSLIDMYAKC 256 VHG ++ G+ ++ + N+L+DMYA C Sbjct: 130 VHGVAVKHGLEGSLYVDNALMDMYATC 156 Score = 64.3 bits (155), Expect = 2e-08 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 ++++TW T+I G+ G + L +F ++ E N +F+ A AC + G+Q+ Sbjct: 173 KNMVTWTTLITGYTHRGDGYGGLQVFREMLLEEAELNPHSFSIAVRACATIGSHTFGRQI 232 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 H II+ G+G+N+ + NS++DMY +C Sbjct: 233 HAAIIKNGLGSNLPVMNSILDMYCRC 258 >ref|XP_006472235.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570-like [Citrus sinensis] Length = 609 Score = 128 bits (321), Expect = 9e-28 Identities = 57/85 (67%), Positives = 72/85 (84%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+IAG+E+SGS + L++F ++ SEG SPNCFTFTS AAC LA L+CGQQVH Sbjct: 278 KDLITWNTIIAGYEKSGSSECLNMFSKMKSEGFSPNCFTFTSIIAACATLAALSCGQQVH 337 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GI++RG+ N+ALAN+LIDMYAKC Sbjct: 338 AGIVRRGLDGNLALANALIDMYAKC 362 Score = 63.5 bits (153), Expect = 3e-08 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD+++W MIAG+ H ++L +F ++ ++PN FT +S AC + L+ V Sbjct: 75 RDVVSWTVMIAGYTSFNCHNQALTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALV 134 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG I+ G+ ++ + NSL+D+YA C Sbjct: 135 HGMAIKEGLEGSIYVENSLMDVYATC 160 Score = 61.6 bits (148), Expect = 1e-07 Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 1/82 (1%) Frame = +2 Query: 11 ITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+I G+ SG+ + L +F ++ EG+ N ++F+ A AC + ++ G+ +H Sbjct: 180 VSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAA 239 Query: 188 IIQRGIGANVALANSLIDMYAK 253 +I+ G G+N+ + NS++DMY + Sbjct: 240 VIKHGFGSNLPVMNSILDMYCR 261 >ref|XP_006382363.1| hypothetical protein POPTR_0005s01440g [Populus trichocarpa] gi|550337722|gb|ERP60160.1| hypothetical protein POPTR_0005s01440g [Populus trichocarpa] Length = 615 Score = 126 bits (317), Expect = 3e-27 Identities = 58/85 (68%), Positives = 68/85 (80%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+IAG+ERS S + L +F Q+ SEG SPNCFTFTS AAC N A L CGQQVH Sbjct: 322 KDLITWNTLIAGYERSDSIEPLFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVH 381 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGI +RG+ N+ LAN+LIDMYAKC Sbjct: 382 GGIFRRGLDGNLELANALIDMYAKC 406 Score = 58.5 bits (140), Expect = 9e-07 Identities = 24/86 (27%), Positives = 53/86 (61%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 +++++W T+IAG+ G+ +++ +F ++ EG N + + A AC ++ G+Q+ Sbjct: 221 KNVVSWTTLIAGYTHRGNGSRAVQVFREMSLEGAELNPHSISIAVRACASVGSNILGRQI 280 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 H +I+ G +++ + NS++DMY +C Sbjct: 281 HTAVIKHGFESDLPVMNSILDMYCRC 306 >emb|CBI39620.3| unnamed protein product [Vitis vinifera] Length = 591 Score = 126 bits (316), Expect = 4e-27 Identities = 57/85 (67%), Positives = 70/85 (82%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RDLITWNT+IAG+ERS +SL++F + SEG SPNCFTFTS AAC LA LNCGQQ+H Sbjct: 259 RDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 318 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G II+RG+ N+AL+N+LIDMY+KC Sbjct: 319 GRIIRRGLDGNLALSNALIDMYSKC 343 Score = 61.2 bits (147), Expect = 1e-07 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHL-FCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 + LI MIAG+ +H + FC++ +E L PN FT +S AC + L+ G+ V Sbjct: 56 KGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLV 115 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG I+ G+ + + N+L+DMYA C Sbjct: 116 HGLAIKHGLDGFIYVDNALMDMYATC 141 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 11 ITWNTMIAGF-ERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+IAG+ R + L +F Q+ E + N F+F+ A AC ++ G+Q+H Sbjct: 161 VSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAA 220 Query: 188 IIQRGIGANVALANSLIDMYAKC 256 + + G +N+ + NS++DMY +C Sbjct: 221 VTKHGFESNLPVMNSILDMYCRC 243 >ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Vitis vinifera] Length = 607 Score = 126 bits (316), Expect = 4e-27 Identities = 57/85 (67%), Positives = 70/85 (82%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RDLITWNT+IAG+ERS +SL++F + SEG SPNCFTFTS AAC LA LNCGQQ+H Sbjct: 275 RDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 334 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G II+RG+ N+AL+N+LIDMY+KC Sbjct: 335 GRIIRRGLDGNLALSNALIDMYSKC 359 Score = 70.9 bits (172), Expect = 2e-10 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHL-FCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W MIAG+ +H + FC++ +E L PN FT +S AC + L+ G+ V Sbjct: 72 RDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLV 131 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG I+ G+ + + N+L+DMYA C Sbjct: 132 HGLAIKHGLDGFIYVDNALMDMYATC 157 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 11 ITWNTMIAGF-ERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+IAG+ R + L +F Q+ E + N F+F+ A AC ++ G+Q+H Sbjct: 177 VSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAA 236 Query: 188 IIQRGIGANVALANSLIDMYAKC 256 + + G +N+ + NS++DMY +C Sbjct: 237 VTKHGFESNLPVMNSILDMYCRC 259 >ref|XP_006433564.1| hypothetical protein CICLE_v10000630mg [Citrus clementina] gi|557535686|gb|ESR46804.1| hypothetical protein CICLE_v10000630mg [Citrus clementina] Length = 609 Score = 125 bits (313), Expect = 8e-27 Identities = 56/85 (65%), Positives = 71/85 (83%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+IAG+E+SGS + L++F ++ SE SPNCFTFTS AAC LA L+CGQQVH Sbjct: 278 KDLITWNTIIAGYEKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVH 337 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GI++RG+ N+ALAN+LIDMYAKC Sbjct: 338 AGIVRRGLDGNLALANALIDMYAKC 362 Score = 61.6 bits (148), Expect = 1e-07 Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 1/82 (1%) Frame = +2 Query: 11 ITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+I G+ SG+ + L +F ++ EG+ N ++F+ A AC + ++ G+ +H Sbjct: 180 VSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAA 239 Query: 188 IIQRGIGANVALANSLIDMYAK 253 +I+ G G+N+ + NS++DMY + Sbjct: 240 VIKHGFGSNLPVMNSILDMYCR 261 Score = 61.2 bits (147), Expect = 1e-07 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD+++W MIAG+ H ++ +F ++ ++PN FT +S AC + L+ V Sbjct: 75 RDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALV 134 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG I+ G+ ++ + NSL+D+YA C Sbjct: 135 HGMAIKEGLEGSIYVENSLMDVYATC 160 >ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 606 Score = 124 bits (311), Expect = 1e-26 Identities = 57/85 (67%), Positives = 69/85 (81%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +D ITWNT+IAGFE S++SL +F Q+ SEG SPNCFTFTS AAC NLA+L CGQQ+H Sbjct: 274 KDTITWNTLIAGFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLH 333 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGII RG+ N+ L+N+LIDMYAKC Sbjct: 334 GGIIHRGLDNNLELSNALIDMYAKC 358 Score = 67.0 bits (162), Expect = 3e-09 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 2/87 (2%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD+I W +MI G+ H ++ ++F + +G+ PN FT ++ AC +L L CG+ V Sbjct: 70 RDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLV 129 Query: 179 HGGIIQRGI-GANVALANSLIDMYAKC 256 HG I+ G G+++ + N+L+DMYA C Sbjct: 130 HGLAIKIGTQGSSIYVDNALMDMYATC 156 Score = 60.8 bits (146), Expect = 2e-07 Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGF-ERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 ++ ++W T+I G+ R + L +F Q+ E + F+F+ A +AC ++ N G+QV Sbjct: 173 KNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQV 232 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 H +I G +N+ + N+++DMY +C Sbjct: 233 HAAVINHGFESNLPVMNAILDMYCRC 258 >ref|XP_002318941.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550324647|gb|EEE94864.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 610 Score = 121 bits (303), Expect = 1e-25 Identities = 55/85 (64%), Positives = 67/85 (78%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+IAG+ERS S + +F Q+ SEG +PNCFTFTS A C N+A L CGQQVH Sbjct: 278 KDLITWNTLIAGYERSDSIEPFFIFSQMESEGFTPNCFTFTSLIATCANVAALCCGQQVH 337 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGI +RG+ N+ LAN+LIDMYAKC Sbjct: 338 GGIFRRGLDRNLELANALIDMYAKC 362 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/86 (29%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 +++++W T+IAG+ G+ +++L +F ++ +G++ N + + A AC ++ N G+Q+ Sbjct: 177 KNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIGSQNFGRQI 236 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 H +I+ G +++ + NS++DMY +C Sbjct: 237 HTAVIKHGFESDLPVTNSILDMYCRC 262 >ref|XP_004304909.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570-like [Fragaria vesca subsp. vesca] Length = 608 Score = 120 bits (300), Expect = 3e-25 Identities = 54/85 (63%), Positives = 68/85 (80%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+I+G+E+S +SL +F ++ SEG SPN FT TS AAC N+A LNCG+QVH Sbjct: 276 KDLITWNTLISGYEKSDPRESLSIFSRMESEGFSPNSFTLTSVTAACANMAALNCGEQVH 335 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G II+RG N+ALAN+LIDMYAKC Sbjct: 336 GTIIRRGFNKNLALANTLIDMYAKC 360 Score = 75.1 bits (183), Expect = 9e-12 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLH-LFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++TW MIAG+ H S +FC++ + PN FTF+S AC + L CG V Sbjct: 73 RDVVTWTAMIAGYTSCSHHSSAWGVFCEMFRSDMEPNAFTFSSVLKACKGMVSLLCGALV 132 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG ++ G+ ++ + N+L+DMY C Sbjct: 133 HGSTVKYGMKGSIYVENALMDMYGAC 158 Score = 60.1 bits (144), Expect = 3e-07 Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 ++ ++W ++I G+ G + L +F Q+ EG+ PN F+F+ A AC ++ G+Q+ Sbjct: 175 KNAVSWTSLITGYTHRGDGYGGLQVFRQMLLEGVEPNPFSFSIAVKACASVGSQTFGRQL 234 Query: 179 HGGIIQRGIGANVALANSLIDMYAK 253 H +I+ +++ + NS++DMY K Sbjct: 235 HSAVIKYAFDSHLPVMNSILDMYCK 259 >ref|XP_002512535.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548496|gb|EEF49987.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 387 Score = 119 bits (299), Expect = 3e-25 Identities = 55/85 (64%), Positives = 69/85 (81%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RDLITWNT+IAG+ERS S ++L +F ++ G P+C TFTS AAC NLAVL+CGQQVH Sbjct: 226 RDLITWNTIIAGYERSDSIEALFIFSEMKLNGFDPDCNTFTSVTAACANLAVLSCGQQVH 285 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGIIQ+G+ ++ LAN+LIDMYAKC Sbjct: 286 GGIIQKGLDKDLILANALIDMYAKC 310 Score = 71.2 bits (173), Expect = 1e-10 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHK-SLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W MIAG+ H + +FC + + ++PN FT +S AC + L+CG V Sbjct: 23 RDVVAWTVMIAGYASCNEHAYAWSMFCDMVASEMNPNAFTISSVLKACKGMKSLSCGTLV 82 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG I+ GI ++ + N+L+D YA C Sbjct: 83 HGFAIKHGIEGSIFVDNALMDAYATC 108 Score = 63.2 bits (152), Expect = 4e-08 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 ++ ++W T+IAG+ G H L +F Q+ E N ++F+ A AC ++ N G+Q+ Sbjct: 125 KNAVSWTTLIAGYTHKGDGHLGLQIFRQMLLEEEECNPYSFSIAVRACASIGSHNFGKQI 184 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 H +I+ G ++ + NS++DMY +C Sbjct: 185 HAAVIKHGCEFSLPVMNSILDMYCRC 210 >gb|EXB53013.1| hypothetical protein L484_018897 [Morus notabilis] Length = 582 Score = 119 bits (298), Expect = 4e-25 Identities = 52/85 (61%), Positives = 67/85 (78%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 ++LITWNT+IAG++R S + LHLF Q+ S+G PNCFTF++ A C NLA+L CGQQVH Sbjct: 250 KNLITWNTLIAGYQRMDSSECLHLFSQMESQGFRPNCFTFSNVTAGCANLALLACGQQVH 309 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 GGI +RG N+ +AN+LIDMYAKC Sbjct: 310 GGIFRRGFNQNLEVANALIDMYAKC 334 Score = 70.1 bits (170), Expect = 3e-10 Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 +D++ W M+ G+ H + LFC + + PN FTF+S AC + L CG V Sbjct: 52 KDVVAWTAMVEGYTSCNDHGHAWLLFCAMVRSEVGPNAFTFSSVLKACRGMKALLCGASV 111 Query: 179 HGGIIQRG--IGANVALANSLIDMYAKC 256 HG +++RG + +V + N+L+DMYA C Sbjct: 112 HGSVVKRGVTVEGSVYVENALMDMYATC 139 >ref|XP_006392413.1| hypothetical protein EUTSA_v10024029mg [Eutrema salsugineum] gi|557088919|gb|ESQ29699.1| hypothetical protein EUTSA_v10024029mg [Eutrema salsugineum] Length = 610 Score = 114 bits (286), Expect = 1e-23 Identities = 53/85 (62%), Positives = 64/85 (75%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RDLITWNT+I+ ERS S ++L +F + S G PNC+TFTS AAC N+A LNCGQQ+H Sbjct: 276 RDLITWNTLISELERSDSSEALMMFQRFESRGFVPNCYTFTSLVAACANIAALNCGQQLH 335 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G I +RG NV LAN+LIDMYAKC Sbjct: 336 GRIYRRGFNKNVELANALIDMYAKC 360 Score = 64.7 bits (156), Expect = 1e-08 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W MI G+ S + ++ F ++ +G PN FT +S +C N+ VL CG V Sbjct: 73 RDVVAWTAMITGYASSEYNARAWDCFREMLRQGTDPNEFTLSSVLKSCRNMKVLACGGLV 132 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG +++ G+ ++ + N+L++MYA C Sbjct: 133 HGFVVKLGMEGSLYVDNALVNMYATC 158 >ref|XP_006301338.1| hypothetical protein CARUB_v10021748mg, partial [Capsella rubella] gi|482570048|gb|EOA34236.1| hypothetical protein CARUB_v10021748mg, partial [Capsella rubella] Length = 614 Score = 114 bits (286), Expect = 1e-23 Identities = 52/85 (61%), Positives = 65/85 (76%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RDLITWNT+++ ERS S ++L +F + S+G PNC+TFTS AAC N+A LNCGQQ+H Sbjct: 280 RDLITWNTLVSELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 339 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G I +RG NV LAN+LIDMYAKC Sbjct: 340 GRIYRRGFNKNVELANALIDMYAKC 364 Score = 62.0 bits (149), Expect = 8e-08 Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHK-SLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W MI G+ S + + F ++ +G SPN FT +S +C N VL G V Sbjct: 77 RDVVAWTAMITGYASSNYNSCAWECFQEMFRQGTSPNEFTLSSVLKSCRNTKVLAYGASV 136 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG +++ G+ ++ + N+L++MYA C Sbjct: 137 HGVVVKLGMEGSLYVDNALMNMYATC 162 >ref|NP_176050.1| pentatricopeptide repeat protein PGN [Arabidopsis thaliana] gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g56570 gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana] gi|332195289|gb|AEE33410.1| pentatricopeptide repeat protein PGN [Arabidopsis thaliana] Length = 611 Score = 114 bits (285), Expect = 1e-23 Identities = 52/85 (61%), Positives = 65/85 (76%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+I+ ERS S ++L +F + S+G PNC+TFTS AAC N+A LNCGQQ+H Sbjct: 277 KDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G I +RG NV LAN+LIDMYAKC Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKC 361 Score = 62.8 bits (151), Expect = 5e-08 Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W MI G+ S + ++ F ++ +G SPN FT +S +C N+ VL G V Sbjct: 74 RDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALV 133 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG +++ G+ ++ + N++++MYA C Sbjct: 134 HGVVVKLGMEGSLYVDNAMMNMYATC 159 >ref|XP_007208505.1| hypothetical protein PRUPE_ppa026465mg, partial [Prunus persica] gi|462404147|gb|EMJ09704.1| hypothetical protein PRUPE_ppa026465mg, partial [Prunus persica] Length = 588 Score = 114 bits (284), Expect = 2e-23 Identities = 53/85 (62%), Positives = 67/85 (78%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RDLITWNT+I+G+ER S +SL +F + +EG SPN FTF S +AC NLAVLN G+QVH Sbjct: 260 RDLITWNTLISGYERFDSKESLLIFSHMDTEGFSPNSFTFCSVISACANLAVLNYGEQVH 319 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G II+ G+ N+ALAN+L+DMYAKC Sbjct: 320 GRIIRGGLNKNLALANALVDMYAKC 344 Score = 78.2 bits (191), Expect = 1e-12 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHK-SLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W +IAG+ H + LFC++ + PN FTF+S AC + L+CG V Sbjct: 57 RDVVAWTAIIAGYTSCSHHSHAWALFCEMVRNEMEPNAFTFSSVLKACKGMKALSCGALV 116 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HGG I++G+ ++ + N+L+DMYA C Sbjct: 117 HGGAIKQGMQGSIYVENALMDMYATC 142 Score = 62.4 bits (150), Expect = 6e-08 Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%) Frame = +2 Query: 11 ITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+I GF G+ + L +F Q+ EG N F+F+ A AC ++ G+Q+H Sbjct: 162 VSWTTLITGFTHRGNGYSGLQVFRQMLLEGAELNPFSFSIAIRACASIGSHTFGKQIHSA 221 Query: 188 IIQRGIGANVALANSLIDMYAK 253 +I+ G +N+ + NS++DMY + Sbjct: 222 VIKHGFESNLPVMNSILDMYCR 243 >ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 611 Score = 114 bits (284), Expect = 2e-23 Identities = 52/85 (61%), Positives = 65/85 (76%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +DLITWNT+I+ ERS S ++L +F + S+G PNC+TFTS AAC N+A LNCGQQ+H Sbjct: 277 KDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G I +RG NV LAN+LIDMYAKC Sbjct: 337 GRIYRRGFNKNVELANALIDMYAKC 361 Score = 62.4 bits (150), Expect = 6e-08 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHK-SLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD++ W MI G+ S + + F ++ +G SPN FT +S +C N+ VL G V Sbjct: 74 RDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALV 133 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 HG +++ G+ ++ + N+L++MYA C Sbjct: 134 HGVVVKLGMEGSLYVDNALMNMYATC 159 >ref|XP_004495637.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570-like [Cicer arietinum] Length = 607 Score = 112 bits (280), Expect = 5e-23 Identities = 54/85 (63%), Positives = 66/85 (77%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 +D ITWNT+IAGFE S +SL +F Q+ +EG SPN FTFTS AAC NLAVL CGQQ+H Sbjct: 273 KDTITWNTLIAGFETLDSKESLCIFLQMVAEGFSPNGFTFTSVIAACANLAVLYCGQQLH 332 Query: 182 GGIIQRGIGANVALANSLIDMYAKC 256 G II+RG ++ L+N+LIDMYAKC Sbjct: 333 GEIIRRGFDNSLELSNALIDMYAKC 357 Score = 62.8 bits (151), Expect = 5e-08 Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +2 Query: 2 RDLITWNTMIAGF-ERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 ++ ++W T+I G+ R ++ L +F Q+ E + F+F+ A +AC ++ N G+QV Sbjct: 172 KNAVSWTTLITGYTHRRDAYGGLQVFRQMFMEEGELSPFSFSIAISACASIGSSNLGKQV 231 Query: 179 HGGIIQRGIGANVALANSLIDMYAKC 256 H +I G +N+ + NS++DMY +C Sbjct: 232 HAAVINHGFESNLPVMNSILDMYCRC 257 Score = 61.2 bits (147), Expect = 1e-07 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQV 178 RD+I W MI G+ H ++ ++F + +G+ PN FT +S C L L+ G+ V Sbjct: 69 RDVIAWTAMITGYTSCDHHNRAWNMFSYMLRDGVKPNAFTVSSVLKGCKELKALSRGKLV 128 Query: 179 HGGIIQRGI-GANVALANSLIDMYAKC 256 HG I+ G G+++ + N+L++MYA C Sbjct: 129 HGLAIKIGTQGSSIYVDNALVNMYATC 155 >ref|XP_006344789.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570-like [Solanum tuberosum] Length = 605 Score = 112 bits (279), Expect = 7e-23 Identities = 50/84 (59%), Positives = 67/84 (79%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSHKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVH 181 RD ITWNT+IAG+E+S ++S+ + + EGLSPNCFTF+S AA NLA+L+CG+Q+H Sbjct: 273 RDSITWNTLIAGYEKSDPYESISTYSHMELEGLSPNCFTFSSIIAAVANLAILSCGEQIH 332 Query: 182 GGIIQRGIGANVALANSLIDMYAK 253 G II+RG+G N+ L N+LIDMYAK Sbjct: 333 GRIIKRGLGGNLELDNALIDMYAK 356 Score = 60.8 bits (146), Expect = 2e-07 Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 1/83 (1%) Frame = +2 Query: 11 ITWNTMIAGFERSGS-HKSLHLFCQIGSEGLSPNCFTFTSAAAACGNLAVLNCGQQVHGG 187 ++W T+IAG+ G + L++F ++ SE N F+F+ A AC ++ G+Q+H Sbjct: 175 VSWTTLIAGYTHRGDGYMGLNVFRRMLSEEGESNPFSFSIAVRACASVHSCTYGKQLHAA 234 Query: 188 IIQRGIGANVALANSLIDMYAKC 256 I + G+ N+ + NS++DMY +C Sbjct: 235 ITKHGLDFNLPVMNSILDMYCRC 257 Score = 56.2 bits (134), Expect = 4e-06 Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Frame = +2 Query: 2 RDLITWNTMIAGFERSGSH-KSLHLFCQIGS-EGLSPNCFTFTSAAAACGNLAVLNCGQQ 175 RD++ W TMI+G+ H ++ +FC++ + N FT +S AC + + G Sbjct: 69 RDVVAWTTMISGYTSCNLHGRAWMVFCEMMRYTDVRYNEFTLSSTLKACKGINSYSHGAL 128 Query: 176 VHGGIIQRGIGANVALANSLIDMYAKC 256 VHG ++++G+ ++ ++N+L+D+YA C Sbjct: 129 VHGLVLKQGMSGSIYVSNALLDVYATC 155