BLASTX nr result
ID: Cocculus23_contig00048597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00048597
(382 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a... 109 5e-22
emb|CBI32804.3| unnamed protein product [Vitis vinifera] 105 9e-21
ref|XP_006836260.1| hypothetical protein AMTR_s00101p00139450 [A... 94 3e-17
ref|XP_004299938.1| PREDICTED: putative SWI/SNF-related matrix-a... 93 3e-17
gb|EXB43775.1| SMARCA3-like protein 1 [Morus notabilis] 91 1e-16
ref|XP_007028229.1| DNA/RNA helicase protein [Theobroma cacao] g... 91 1e-16
gb|EYU20813.1| hypothetical protein MIMGU_mgv1a001182mg [Mimulus... 91 2e-16
ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223... 89 5e-16
ref|XP_006348040.1| PREDICTED: putative SWI/SNF-related matrix-a... 87 2e-15
ref|XP_006482058.1| PREDICTED: putative SWI/SNF-related matrix-a... 84 2e-14
ref|XP_004493378.1| PREDICTED: putative SWI/SNF-related matrix-a... 84 2e-14
ref|XP_004252012.1| PREDICTED: putative SWI/SNF-related matrix-a... 84 2e-14
ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula... 84 3e-14
ref|XP_007204647.1| hypothetical protein PRUPE_ppa001559mg [Prun... 83 5e-14
ref|XP_006287065.1| hypothetical protein CARUB_v10000214mg [Caps... 82 8e-14
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ... 82 1e-13
gb|AAM13184.1| helicase-like transcription factor-like protein [... 81 1e-13
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026... 81 1e-13
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m... 81 1e-13
ref|XP_006398972.1| hypothetical protein EUTSA_v10012664mg [Eutr... 81 2e-13
>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Vitis vinifera]
Length = 874
Score = 109 bits (272), Expect = 5e-22
Identities = 58/91 (63%), Positives = 68/91 (74%)
Frame = -1
Query: 277 EDPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQ 98
EDPV+L+M+LDHW E ++DE S P SSPSE++LVGFV VN+VG+Q
Sbjct: 4 EDPVSLFMSLDHWREFPIDADDDE----DSSQCPL-----SSPSETYLVGFVIVNIVGIQ 54
Query: 97 HYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
+YSGTISGRE VGLVREPLNPYD NAIKVLN
Sbjct: 55 YYSGTISGRERVGLVREPLNPYDRNAIKVLN 85
>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 105 bits (261), Expect = 9e-21
Identities = 56/89 (62%), Positives = 66/89 (74%)
Frame = -1
Query: 271 PVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQHY 92
PV+L+M+LDHW E ++DE S P SSPSE++LVGFV VN+VG+Q+Y
Sbjct: 19 PVSLFMSLDHWREFPIDADDDE----DSSQCPL-----SSPSETYLVGFVIVNIVGIQYY 69
Query: 91 SGTISGREMVGLVREPLNPYDPNAIKVLN 5
SGTISGRE VGLVREPLNPYD NAIKVLN
Sbjct: 70 SGTISGRERVGLVREPLNPYDRNAIKVLN 98
>ref|XP_006836260.1| hypothetical protein AMTR_s00101p00139450 [Amborella trichopoda]
gi|548838760|gb|ERM99113.1| hypothetical protein
AMTR_s00101p00139450 [Amborella trichopoda]
Length = 674
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/52 (82%), Positives = 50/52 (96%)
Frame = -1
Query: 157 SSPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIKVLNM 2
+S SE+F+VGFV VN+VGL+HY+GTI+GREMVGLVREPLNPYDPNAIKVLNM
Sbjct: 2 ASTSETFMVGFVIVNIVGLKHYTGTINGREMVGLVREPLNPYDPNAIKVLNM 53
>ref|XP_004299938.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/91 (50%), Positives = 64/91 (70%)
Frame = -1
Query: 277 EDPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQ 98
EDPV+L+++LD W P + D+ S +PS+++++GF+ N+VG+Q
Sbjct: 5 EDPVSLFLSLDQWQGPP---DSDD------------SDPLPTPSDTYMLGFLIANIVGIQ 49
Query: 97 HYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
+YSGTI+GREMVGLVREPLNPYD NAI+VLN
Sbjct: 50 YYSGTITGREMVGLVREPLNPYDSNAIRVLN 80
>gb|EXB43775.1| SMARCA3-like protein 1 [Morus notabilis]
Length = 870
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/81 (56%), Positives = 56/81 (69%)
Frame = -1
Query: 247 DHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQHYSGTISGRE 68
D W +P FL + + L SS SE++++GFV N+VG+Q+YSGTISGRE
Sbjct: 10 DAWQDPDAFLSQSQSL--------------SSSSETYMLGFVIANIVGIQYYSGTISGRE 55
Query: 67 MVGLVREPLNPYDPNAIKVLN 5
MVGLVREPLNPYD NAIKVLN
Sbjct: 56 MVGLVREPLNPYDSNAIKVLN 76
>ref|XP_007028229.1| DNA/RNA helicase protein [Theobroma cacao]
gi|508716834|gb|EOY08731.1| DNA/RNA helicase protein
[Theobroma cacao]
Length = 906
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = -1
Query: 274 DPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQH 95
DP++L+++LD W E QES S S+SFL+GFV N+VGLQ+
Sbjct: 45 DPISLFLSLDEWPED------------QESSS-------QPSSDSFLLGFVFANIVGLQY 85
Query: 94 YSGTISGREMVGLVREPLNPYDPNAIKVLN 5
Y G ISGREMVGLVREPLNPYD NAIKVLN
Sbjct: 86 YRGKISGREMVGLVREPLNPYDQNAIKVLN 115
>gb|EYU20813.1| hypothetical protein MIMGU_mgv1a001182mg [Mimulus guttatus]
Length = 871
Score = 90.9 bits (224), Expect = 2e-16
Identities = 50/92 (54%), Positives = 56/92 (60%)
Frame = -1
Query: 277 EDPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQ 98
+DPV +M+LD W SSP E+FLVGFV VNVVGL+
Sbjct: 12 QDPVEAFMSLDRWP--------------------------SSPVETFLVGFVIVNVVGLR 45
Query: 97 HYSGTISGREMVGLVREPLNPYDPNAIKVLNM 2
HY G ISGRE+VGLVRE LNPYD NAIKVLNM
Sbjct: 46 HYEGIISGREIVGLVREELNPYDENAIKVLNM 77
>ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223523786|gb|EEF27189.1|
helicase, putative [Ricinus communis]
Length = 518
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/91 (53%), Positives = 61/91 (67%)
Frame = -1
Query: 277 EDPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQ 98
+DPV L+M+LD W QE +S S SE+FLVGFV N+VG++
Sbjct: 7 QDPVALFMSLDDW---------------QEDLSS------QSLSETFLVGFVIANIVGVR 45
Query: 97 HYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
+YSGTI+GRE+VGLVREPLNP+D NAIKVLN
Sbjct: 46 YYSGTITGRELVGLVREPLNPHDQNAIKVLN 76
>ref|XP_006348040.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Solanum tuberosum]
Length = 881
Score = 87.4 bits (215), Expect = 2e-15
Identities = 50/90 (55%), Positives = 64/90 (71%)
Frame = -1
Query: 274 DPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQH 95
DPV+++M+LD W P LEE+E + ++V+ E ++VGFV VNVVGLQ+
Sbjct: 6 DPVDVFMSLDRW--PLSPLEEEEEI---DTVAAR---------EMYMVGFVIVNVVGLQY 51
Query: 94 YSGTISGREMVGLVREPLNPYDPNAIKVLN 5
Y+GTISGRE+VGL REPLN YD NAIKVLN
Sbjct: 52 YTGTISGREIVGLQREPLNQYDSNAIKVLN 81
>ref|XP_006482058.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Citrus sinensis]
Length = 869
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = -1
Query: 154 SPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
S +E++++GFV N+VGLQ+YSGTISGREMVGLVREPLNPYD NA+KVLN
Sbjct: 22 SSNETYMLGFVIANIVGLQYYSGTISGREMVGLVREPLNPYDSNAVKVLN 71
>ref|XP_004493378.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Cicer arietinum]
Length = 818
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = -1
Query: 166 PTYSSPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
P S S+++L GFV N+VGL++YSGTISGREMVGLVREPLNPYD NAI+VLN
Sbjct: 7 PYSQSDSQTYLAGFVMANIVGLKYYSGTISGREMVGLVREPLNPYDTNAIRVLN 60
>ref|XP_004252012.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Solanum lycopersicum]
Length = 881
Score = 84.0 bits (206), Expect = 2e-14
Identities = 47/90 (52%), Positives = 60/90 (66%)
Frame = -1
Query: 274 DPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQH 95
DPV+++M+LD W P LE++E + E ++VGFV VNVVGLQ+
Sbjct: 6 DPVDVFMSLDRW--PLSPLEDEE------------ETDTVAAREMYMVGFVIVNVVGLQY 51
Query: 94 YSGTISGREMVGLVREPLNPYDPNAIKVLN 5
Y+G+ISGRE+VGL REPLN YD NAIKVLN
Sbjct: 52 YTGSISGREIVGLQREPLNQYDSNAIKVLN 81
>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
RING-type; ATP-requiring DNA helicase RecQ [Medicago
truncatula] gi|355499950|gb|AES81153.1| DNA repair
protein RAD5 [Medicago truncatula]
Length = 844
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = -1
Query: 166 PTYSSPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
P S SE++L GFV N+VG++HYSGTI+GRE++GL+REPLNPYD NAIKVLN
Sbjct: 7 PFSQSQSETYLAGFVMANIVGIKHYSGTITGREILGLIREPLNPYDSNAIKVLN 60
>ref|XP_007204647.1| hypothetical protein PRUPE_ppa001559mg [Prunus persica]
gi|462400178|gb|EMJ05846.1| hypothetical protein
PRUPE_ppa001559mg [Prunus persica]
Length = 802
Score = 82.8 bits (203), Expect = 5e-14
Identities = 49/91 (53%), Positives = 58/91 (63%)
Frame = -1
Query: 277 EDPVNLYMNLDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQ 98
EDPV LYMNLD+W P E DE E + SS S++ L+GFV ++VG+Q
Sbjct: 4 EDPVKLYMNLDNWQGPP--TEPDEFRPSSEDYQ-----SLSSSSDTRLLGFVIADIVGIQ 56
Query: 97 HYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
Y GTISG+EMV LVREPLN D NAIKV N
Sbjct: 57 WYLGTISGQEMVVLVREPLNFQDSNAIKVFN 87
>ref|XP_006287065.1| hypothetical protein CARUB_v10000214mg [Capsella rubella]
gi|482555771|gb|EOA19963.1| hypothetical protein
CARUB_v10000214mg [Capsella rubella]
Length = 846
Score = 82.0 bits (201), Expect = 8e-14
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = -1
Query: 148 SESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIKVLN 5
+ES+LVGFV N+VGLQ+YSG I+GREMVGLVREPLNPYD NAI+VLN
Sbjct: 20 TESYLVGFVIANIVGLQYYSGRINGREMVGLVREPLNPYDENAIRVLN 67
>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297316976|gb|EFH47398.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 861
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/82 (53%), Positives = 56/82 (68%)
Frame = -1
Query: 250 LDHWGEPGFFLEEDEGLLGQESVSPALSPTYSSPSESFLVGFVSVNVVGLQHYSGTISGR 71
L H+ P E++ Q V P+ + SES+L+GFV N+VGL++YSG I+GR
Sbjct: 5 LRHFSSPPMANEDEF----QSPVEPS-QQSQDCVSESYLIGFVIANIVGLKYYSGRINGR 59
Query: 70 EMVGLVREPLNPYDPNAIKVLN 5
EMVGLVREPLNPYD NAI+VLN
Sbjct: 60 EMVGLVREPLNPYDNNAIRVLN 81
>gb|AAM13184.1| helicase-like transcription factor-like protein [Arabidopsis
thaliana]
Length = 310
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = -1
Query: 193 QESVSPALSPTYSSPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIK 14
Q V P+ + SES+L+GFV N+VGL++YSG I+GREMVGLVREPLN YD NAI+
Sbjct: 25 QSPVEPSQQQSQDCVSESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIR 84
Query: 13 VLN 5
VLN
Sbjct: 85 VLN 87
>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
helicase-like transcription factor-like protein
[Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
At5g05130 [Arabidopsis thaliana]
gi|332003449|gb|AED90832.1| DNA/RNA helicase
[Arabidopsis thaliana]
Length = 862
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = -1
Query: 193 QESVSPALSPTYSSPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIK 14
Q V P+ + SES+L+GFV N+VGL++YSG I+GREMVGLVREPLN YD NAI+
Sbjct: 20 QSPVEPSQQQSQDCVSESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIR 79
Query: 13 VLN 5
VLN
Sbjct: 80 VLN 82
>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1; Short=SMARCA3-like protein 1
gi|10178052|dbj|BAB11535.1| helicase-like transcription
factor-like protein [Arabidopsis thaliana]
Length = 881
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = -1
Query: 193 QESVSPALSPTYSSPSESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPYDPNAIK 14
Q V P+ + SES+L+GFV N+VGL++YSG I+GREMVGLVREPLN YD NAI+
Sbjct: 39 QSPVEPSQQQSQDCVSESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIR 98
Query: 13 VLN 5
VLN
Sbjct: 99 VLN 101
>ref|XP_006398972.1| hypothetical protein EUTSA_v10012664mg [Eutrema salsugineum]
gi|557100062|gb|ESQ40425.1| hypothetical protein
EUTSA_v10012664mg [Eutrema salsugineum]
Length = 861
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Frame = -1
Query: 202 LLGQESVSPALSPTYSSP---SESFLVGFVSVNVVGLQHYSGTISGREMVGLVREPLNPY 32
+ +E P+ P+ S SE +VGFV N+VGL++YSG I+GRE+VGLVREPLNPY
Sbjct: 13 MASEEEFRPSEEPSQQSQEYISEPHMVGFVIANIVGLKYYSGRINGRELVGLVREPLNPY 72
Query: 31 DPNAIKVLNM 2
D NAI+VLNM
Sbjct: 73 DENAIRVLNM 82