BLASTX nr result
ID: Cocculus23_contig00047554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00047554
(415 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 75 9e-12
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 75 1e-11
gb|EMT08767.1| Brefeldin A-inhibited guanine nucleotide-exchange... 74 2e-11
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN... 73 4e-11
emb|CCH50976.1| T4.15 [Malus x robusta] 73 5e-11
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 72 6e-11
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 72 6e-11
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 72 1e-10
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 72 1e-10
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 71 1e-10
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 71 1e-10
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 71 2e-10
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 70 3e-10
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 69 5e-10
gb|ABN08636.1| Polyprotein, putative [Medicago truncatula] 69 5e-10
gb|EMT14885.1| Putative disease resistance protein RGA1 [Aegilop... 69 7e-10
gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu] 69 7e-10
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 69 7e-10
gb|EMT12215.1| Protein STRUBBELIG-RECEPTOR FAMILY 1 [Aegilops ta... 69 9e-10
gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis] 68 2e-09
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = -1
Query: 205 GEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWA 41
GE+ D+ HRI+ W+KW+S S VL D+C+ L++KGK +TTIR M YGTECWA
Sbjct: 34 GELDGDLNHRIQAGWMKWKSASGVLCDRCMPLKLKGKFYRTTIRPAMLYGTECWA 88
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 74.7 bits (182), Expect = 1e-11
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = -1
Query: 361 GFRVNRIKIDCIKCN*V-----TLVEVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GGEI 197
G R++R K + ++C + +EV I +++ KY G IIQ GEI
Sbjct: 1174 GLRISRSKTEYMECKFSLRRENSNIEVKIGENILRKVKSFKYLGC-------IIQDNGEI 1226
Query: 196 RDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWA 41
D+ HRI+ W KWRS S + DK + L++KGK +T IR M YGTECWA
Sbjct: 1227 EQDVNHRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECWA 1278
>gb|EMT08767.1| Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Aegilops
tauschii]
Length = 1071
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
S++Q G I +D+ HRIK W+KWR S +LYDK + ++KGK +TT+R M YG ECW
Sbjct: 922 SMLQEDGGIDEDVNHRIKAGWMKWRQASGILYDKRVPQKLKGKFYRTTVRPAMLYGVECW 981
Query: 43 AT 38
T
Sbjct: 982 PT 983
>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
putative [Medicago truncatula]
Length = 195
Score = 73.2 bits (178), Expect = 4e-11
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
S +Q GEI D++HRI+ W+KWR S VL DK + L++KGK +T IR + YGTECW
Sbjct: 86 SFVQNDGEIEADVSHRIQAGWLKWRRASGVLCDKKVPLKLKGKFYRTAIRPALLYGTECW 145
Query: 43 A 41
A
Sbjct: 146 A 146
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
SI+Q GE+ D+ HRI+ W+KW+S S VL D+ + L++KGK +T IR M YGTECW
Sbjct: 802 SILQKNGELDGDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECW 861
Query: 43 A 41
A
Sbjct: 862 A 862
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 72.4 bits (176), Expect = 6e-11
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Frame = -1
Query: 361 GFRVNRIKIDCIKCN*V-----TLVEVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GGEI 197
GFR++R K ++CN + +EV + ++ KY G S +Q GEI
Sbjct: 404 GFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLG-------SFVQNDGEI 456
Query: 196 RDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWA 41
D++HRI+ W+KWR S+VL DK + L++ GK +T +R + YGTECWA
Sbjct: 457 EADVSHRIQAGWLKWRRASSVLCDKKVPLKLTGKFYRTAVRPALLYGTECWA 508
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Frame = -1
Query: 361 GFRVNRIKIDCIKCN*----VTLVEVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GGEIR 194
GFR++R K + ++C V+ EV I ++ KY G S+IQ GEI
Sbjct: 151 GFRLSRSKSEYMECQFNKRRVSNSEVKIGDHIIPQVTRFKYLG-------SVIQDDGEIE 203
Query: 193 DDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWA 41
D+ HRI+ W+KWR S VL D + +++KGK +T +R + YGTECWA
Sbjct: 204 GDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYRTAVRPTILYGTECWA 254
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Frame = -1
Query: 364 QGFRVNRIKIDCIKCN*VTLV------EVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GG 203
+GFR++R K + +KC T EV++ + + +Y G S++Q G
Sbjct: 339 KGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLG-------SMLQKDG 391
Query: 202 EIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWAT 38
+I +D+ HRIK W+KWR S +L DK + ++KGK +T IR + YG ECW T
Sbjct: 392 DIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPT 446
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Frame = -1
Query: 364 QGFRVNRIKIDCIKCN*VTLV------EVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GG 203
+GFR++R K + +KC T EV++ + + +Y G S++Q G
Sbjct: 79 KGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLG-------SMLQKDG 131
Query: 202 EIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWAT 38
+I +D+ HRIK W+KWR S +L DK + ++KGK +T IR + YG ECW T
Sbjct: 132 DIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPT 186
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = -1
Query: 361 GFRVNRIKIDCIKCN*V-----TLVEVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GGEI 197
G R++R K + ++C T +EV I +++ KY G IIQ GEI
Sbjct: 316 GLRISRSKTEYMECKFSLRRENTNIEVEIGENILRKVKSFKYLGC-------IIQDNGEI 368
Query: 196 RDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECWA 41
D+ HRI+ W KWRS S + DK + L++KGK +T IR M YGTEC A
Sbjct: 369 EQDVNHRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECCA 420
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = -1
Query: 364 QGFRVNRIKIDCIKCN*V-----TLVEVNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GGE 200
+GFR++R K + + C T VEV + + + +Y G ++IQ G+
Sbjct: 465 KGFRLSRTKTEYLGCKFSDGLDETDVEVRLAAQVIPKKESFRYLG-------AVIQGSGD 517
Query: 199 IRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
I DD+THR+ W+KWR S VL DK IS ++KGK + +R + YG ECW
Sbjct: 518 IDDDVTHRVGAAWMKWRLASGVLCDKKISPKLKGKFYRVVVRPALLYGAECW 569
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = -1
Query: 364 QGFRVNRIKIDCIKCN*VTLVE-----VNIVIKR**RLRVEKY*GV*SLCTWSIIQ*GGE 200
+GFR++R K + ++C ++ V + + + KY G S+IQ G+
Sbjct: 52 KGFRLSRTKTEYLECKFSDALDEADGDVRLATQIIPKKESFKYLG-------SVIQGSGD 104
Query: 199 IRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
I DD+THRI V W+KWR S VL DK I ++KGK + +R + YG ECW
Sbjct: 105 IDDDVTHRIGVAWMKWRLASGVLCDKKIPPRLKGKFYRMVVRPALLYGAECW 156
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
SI+Q G+I +DI HRIK WVKW++ + VL D + +++KGK +T IR M YG+ECW
Sbjct: 478 SIVQYEGDIEEDIEHRIKAGWVKWKNVTGVLCDVEMPIKLKGKFYRTVIRPAMLYGSECW 537
Query: 43 A 41
A
Sbjct: 538 A 538
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
S++Q G I +D+ HRIK W+KWR S +L DK + ++KGK +T +R M YG ECW
Sbjct: 333 SLLQEDGGIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTVVRPAMLYGAECW 392
Query: 43 AT 38
T
Sbjct: 393 PT 394
>gb|ABN08636.1| Polyprotein, putative [Medicago truncatula]
Length = 116
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTEC 47
SI+Q EI+ D++HRI+ W+KWR S VL DK + L++KGK +TT+R M YGTEC
Sbjct: 58 SIVQNDEEIKADVSHRIQAGWLKWRRASGVLCDKKVPLKLKGKFYRTTVRPAMLYGTEC 116
>gb|EMT14885.1| Putative disease resistance protein RGA1 [Aegilops tauschii]
Length = 1727
Score = 68.9 bits (167), Expect = 7e-10
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
S++Q G I +D+ HRIK W+KWR S +L DK + ++KGK +T +R M YG ECW
Sbjct: 451 SMLQEDGGIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAVRPAMLYGAECW 510
Query: 43 AT 38
T
Sbjct: 511 PT 512
>gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu]
Length = 505
Score = 68.9 bits (167), Expect = 7e-10
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
S++Q G I +D+ HRIK W+KWR S +L DK + ++KGK +T +R M YG ECW
Sbjct: 99 SMLQEDGGIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAVRPAMLYGAECW 158
Query: 43 AT 38
T
Sbjct: 159 PT 160
>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
Length = 213
Score = 68.9 bits (167), Expect = 7e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
++IQ G+I DD+THR+ W+KWR S VL DK I L++KGK + +R + YG ECW
Sbjct: 42 AVIQGSGDIDDDVTHRVGAAWMKWRLASGVLCDKKIPLKLKGKFYRVVVRPALLYGAECW 101
>gb|EMT12215.1| Protein STRUBBELIG-RECEPTOR FAMILY 1 [Aegilops tauschii]
Length = 840
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
S+ Q G I +D+ HRIK W+KWR S +L DK + ++KGK +T +R M YG ECW
Sbjct: 577 SVTQEDGGIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAVRPAMLYGAECW 636
Query: 43 AT 38
T
Sbjct: 637 PT 638
>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
Length = 714
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -1
Query: 223 SIIQ*GGEIRDDITHRIKVDWVKWRSESNVLYDKCISLQVKGKSCKTTIRLVMFYGTECW 44
SI+Q G+I +DI HRIK WVKW++ VL D + +++KGK +T I M YG+ECW
Sbjct: 426 SIVQYEGDIEEDIQHRIKAGWVKWKNAMRVLCDSKMPIKLKGKFYRTVICPAMLYGSECW 485
Query: 43 A 41
A
Sbjct: 486 A 486