BLASTX nr result
ID: Cocculus23_contig00047397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00047397
(600 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33530.3| unnamed protein product [Vitis vinifera] 106 4e-21
ref|XP_006849938.1| hypothetical protein AMTR_s00022p00127120 [A... 105 7e-21
ref|XP_007152607.1| hypothetical protein PHAVU_004G144300g [Phas... 94 2e-17
gb|EYU23583.1| hypothetical protein MIMGU_mgv1a001176mg [Mimulus... 94 3e-17
gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii] 94 3e-17
ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group] g... 94 4e-17
gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis] 93 5e-17
emb|CBI21510.3| unnamed protein product [Vitis vinifera] 93 5e-17
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi... 93 5e-17
emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera] 93 5e-17
ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [A... 93 6e-17
ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Th... 92 8e-17
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi... 92 8e-17
emb|CBI28351.3| unnamed protein product [Vitis vinifera] 92 8e-17
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi... 92 8e-17
ref|XP_002532274.1| pentatricopeptide repeat-containing protein,... 92 8e-17
gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indi... 92 1e-16
ref|XP_006655097.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004293078.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_006349117.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
>emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 106 bits (265), Expect = 4e-21
Identities = 50/79 (63%), Positives = 62/79 (78%)
Frame = -3
Query: 598 SDALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVR 419
SD LVWE LL ACR+HGE+ LG +A+ +M+L+P + G YVLLANIYA+RG WEDK VR
Sbjct: 531 SDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVR 590
Query: 418 ERLDSNQLKKEAGHSWVAL 362
E+L S+ LKK+ G SWVAL
Sbjct: 591 EKLVSHGLKKQVGCSWVAL 609
>ref|XP_006849938.1| hypothetical protein AMTR_s00022p00127120 [Amborella trichopoda]
gi|548853536|gb|ERN11519.1| hypothetical protein
AMTR_s00022p00127120 [Amborella trichopoda]
Length = 619
Score = 105 bits (263), Expect = 7e-21
Identities = 44/76 (57%), Positives = 61/76 (80%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
+ WEA L AC IHGE+ELGA+AAE +M++EP ++GAY+LL+NIYA +G WEDKGK+R+
Sbjct: 498 EGAAWEAFLGACMIHGEIELGAMAAEKVMEIEPEREGAYILLSNIYAAKGKWEDKGKIRK 557
Query: 415 RLDSNQLKKEAGHSWV 368
RL+ + L+K G SW+
Sbjct: 558 RLNESGLRKATGCSWI 573
>ref|XP_007152607.1| hypothetical protein PHAVU_004G144300g [Phaseolus vulgaris]
gi|561025916|gb|ESW24601.1| hypothetical protein
PHAVU_004G144300g [Phaseolus vulgaris]
Length = 601
Score = 94.4 bits (233), Expect = 2e-17
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
DA VW ALLS+CR+H + LG +AAE L LEP G YVLL+NIYA +GLW+++ ++RE
Sbjct: 397 DACVWGALLSSCRVHNNLSLGEIAAEKLFPLEPANPGNYVLLSNIYASKGLWDEENRIRE 456
Query: 415 RLDSNQLKKEAGHSWV 368
+ S L+K G+SW+
Sbjct: 457 MMKSKGLRKNPGYSWI 472
>gb|EYU23583.1| hypothetical protein MIMGU_mgv1a001176mg [Mimulus guttatus]
Length = 872
Score = 94.0 bits (232), Expect = 3e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
+AL+WE +L AC++HG VELG AAE L Q++P D Y+LL+NIYA +G W D KVR+
Sbjct: 668 NALIWENVLGACKVHGNVELGERAAEKLFQIDPETDSNYILLSNIYASKGRWNDVSKVRK 727
Query: 415 RLDSNQLKKEAGHSWVAL 362
+ S +KKE G SWV +
Sbjct: 728 SMSSKGIKKEPGCSWVEI 745
>gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii]
Length = 773
Score = 94.0 bits (232), Expect = 3e-17
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A+VW LL ACR+H VELG +AAE L+ LEP YVLL+NIYA G W+++ +VR+
Sbjct: 486 AMVWRTLLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYASAGKWKERDEVRKL 545
Query: 412 LDSNQLKKEAGHSWVAL 362
+DS ++KKEAG SW+ +
Sbjct: 546 MDSKKVKKEAGSSWIQI 562
>ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR
repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa
Japonica Group] gi|215695208|dbj|BAG90399.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein
OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 93.6 bits (231), Expect = 4e-17
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = -3
Query: 598 SDALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVR 419
+DALVW+ LL ACR H +E+G +AA+N+++LEPR YVLL+N+YAD GLW++ ++R
Sbjct: 617 ADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIR 676
Query: 418 ERLDSNQLKKEAGHSWV 368
+ N L KE G SW+
Sbjct: 677 SAMRDNNLNKETGLSWM 693
>gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]
Length = 879
Score = 93.2 bits (230), Expect = 5e-17
Identities = 39/81 (48%), Positives = 59/81 (72%)
Frame = -3
Query: 598 SDALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVR 419
+DA++W +LS C++HG+VE+ AA NL+QL+P+ AYVLL+NIYAD G+W + +R
Sbjct: 744 ADAVIWRTMLSICKLHGDVEVAEKAARNLLQLDPQDSAAYVLLSNIYADSGMWGEMSNMR 803
Query: 418 ERLDSNQLKKEAGHSWVAL*D 356
+ S++LKKE G SW+ + D
Sbjct: 804 RAMKSHKLKKEPGCSWIEVKD 824
>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 93.2 bits (230), Expect = 5e-17
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A+VW +LLSACRI G VELG AAE + +P+ G+Y+LL+NI+A +G+W D KVR+R
Sbjct: 622 AIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDR 681
Query: 412 LDSNQLKKEAGHSWV 368
+DS+++ KE G SW+
Sbjct: 682 MDSSEVVKEPGRSWI 696
>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 93.2 bits (230), Expect = 5e-17
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A+VW +LLSACRI G VELG AAE + +P+ G+Y+LL+NI+A +G+W D KVR+R
Sbjct: 701 AIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDR 760
Query: 412 LDSNQLKKEAGHSWV 368
+DS+++ KE G SW+
Sbjct: 761 MDSSEVVKEPGRSWI 775
>emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 93.2 bits (230), Expect = 5e-17
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A+VW +LLSACRI G VELG AAE + +P+ G+Y+LL+NI+A +G+W D KVR+R
Sbjct: 609 AIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDR 668
Query: 412 LDSNQLKKEAGHSWV 368
+DS+++ KE G SW+
Sbjct: 669 MDSSEVVKEPGRSWI 683
>ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [Amborella trichopoda]
gi|548843439|gb|ERN03093.1| hypothetical protein
AMTR_s00003p00032470 [Amborella trichopoda]
Length = 791
Score = 92.8 bits (229), Expect = 6e-17
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
DA +WEALL+ CR HG++ELG +AAE L +L PR DG YVLL+N+YA G WE KVR+
Sbjct: 587 DACIWEALLAGCRNHGDMELGLMAAERLFELRPRHDGTYVLLSNMYASIGKWEGVAKVRK 646
Query: 415 RLDSNQLKKEAGHSWV 368
+ +KKE G SW+
Sbjct: 647 TMKDMGVKKEPGCSWI 662
>ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
gi|590683987|ref|XP_007041731.1| Mitochondrial editing
factor 9 isoform 1 [Theobroma cacao]
gi|508705665|gb|EOX97561.1| Mitochondrial editing factor
9 isoform 1 [Theobroma cacao]
gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
9 isoform 1 [Theobroma cacao]
Length = 657
Score = 92.4 bits (228), Expect = 8e-17
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
D VW ALL ACR+H VEL VAAE LM LEP Y+LL N+YAD+G W+D +VRE
Sbjct: 577 DKAVWGALLGACRVHNNVELARVAAEALMSLEPESSAPYILLYNMYADKGQWDDAVEVRE 636
Query: 415 RLDSNQLKKEAGHSWV 368
++ N+++K+A +SW+
Sbjct: 637 MMERNKVRKQAAYSWI 652
>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like isoform X1 [Glycine max]
Length = 748
Score = 92.4 bits (228), Expect = 8e-17
Identities = 39/76 (51%), Positives = 55/76 (72%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
DA VW ALLS+CR+H + LG +AAE L LEP G Y+LL+NIYA +GLW+++ ++RE
Sbjct: 544 DACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIRE 603
Query: 415 RLDSNQLKKEAGHSWV 368
+ S L+K G+SW+
Sbjct: 604 VMKSKGLRKNPGYSWI 619
>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 92.4 bits (228), Expect = 8e-17
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A +W LL+ACR+H V+LG +AAE L+ L+P+ AYVLL+NIYA G W+++ KVR+
Sbjct: 567 ATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKL 626
Query: 412 LDSNQLKKEAGHSWV 368
+D ++KKEAG+SW+
Sbjct: 627 MDMKKVKKEAGYSWI 641
>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 92.4 bits (228), Expect = 8e-17
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A +W LL+ACR+H V+LG +AAE L+ L+P+ AYVLL+NIYA G W+++ KVR+
Sbjct: 663 ATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKL 722
Query: 412 LDSNQLKKEAGHSWV 368
+D ++KKEAG+SW+
Sbjct: 723 MDMKKVKKEAGYSWI 737
>ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528034|gb|EEF30114.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 631
Score = 92.4 bits (228), Expect = 8e-17
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = -3
Query: 595 DALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRE 416
+A+VW +LLSACR+ G VELG AAE + ++ G+Y LL+NIYA +G+W D KVRE
Sbjct: 556 EAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIYASKGMWVDVKKVRE 615
Query: 415 RLDSNQLKKEAGHSWV 368
R+D + KEAGHSW+
Sbjct: 616 RMDIAGVVKEAGHSWI 631
>gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 92.0 bits (227), Expect = 1e-16
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = -3
Query: 598 SDALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVR 419
+DALVW+ LL ACR H +E+G + A+N+++LEPR YVLL+N+YAD GLW++ ++R
Sbjct: 617 ADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIR 676
Query: 418 ERLDSNQLKKEAGHSWV 368
+ N L KE G SW+
Sbjct: 677 SAMRDNNLNKETGLSWM 693
>ref|XP_006655097.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Oryza brachyantha]
Length = 819
Score = 90.9 bits (224), Expect = 2e-16
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = -3
Query: 598 SDALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVR 419
+DALVW+ LL ACR H +++G +AA+N+++LEPR YVLL+N+YAD GLW++ ++R
Sbjct: 614 ADALVWKTLLGACRTHDNIDIGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIR 673
Query: 418 ERLDSNQLKKEAGHSWV 368
+ L KE G SW+
Sbjct: 674 SAMRDKNLNKETGLSWM 690
>ref|XP_004293078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Fragaria vesca subsp. vesca]
Length = 872
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/77 (50%), Positives = 57/77 (74%)
Frame = -3
Query: 598 SDALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVR 419
+DA VW ALL ACR+H +ELG +AAE L+ L+P+ AYVLL+NIYA G W+++ KVR
Sbjct: 667 ADANVWRALLGACRVHRNLELGKLAAEKLISLQPQDSAAYVLLSNIYAAAGNWQERDKVR 726
Query: 418 ERLDSNQLKKEAGHSWV 368
++ ++KK+ G+SW+
Sbjct: 727 RLMNERKVKKQPGYSWI 743
>ref|XP_006349117.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum tuberosum]
Length = 871
Score = 90.5 bits (223), Expect = 3e-16
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = -3
Query: 592 ALVWEALLSACRIHGEVELGAVAAENLMQLEPRKDGAYVLLANIYADRGLWEDKGKVRER 413
A+VW LL+A R+H VELG +AAENL+ L+P+ AYVLL+N+YA G W+++ KVR+
Sbjct: 668 AIVWRTLLAASRVHRNVELGKLAAENLISLQPQDSAAYVLLSNLYAATGDWQERAKVRKL 727
Query: 412 LDSNQLKKEAGHSWV 368
+D ++KKE G+SW+
Sbjct: 728 MDVRKVKKEIGYSWI 742