BLASTX nr result
ID: Cocculus23_contig00047388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00047388
(626 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein... 86 4e-20
ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein... 86 4e-20
ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein... 86 4e-20
ref|XP_002318172.1| pentatricopeptide repeat-containing family p... 87 1e-19
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 83 2e-19
ref|XP_003594983.1| Pentatricopeptide repeat-containing protein ... 86 4e-18
gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis] 79 4e-18
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula] 86 4e-18
gb|EXC36735.1| hypothetical protein L484_000436 [Morus notabilis] 79 5e-18
ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-17
ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, part... 75 2e-17
ref|XP_006372228.1| hypothetical protein POPTR_0018s14430g, part... 76 5e-17
ref|XP_002532091.1| pentatricopeptide repeat-containing protein,... 76 8e-17
ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containi... 82 1e-16
ref|XP_004487967.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-16
ref|XP_007141849.1| hypothetical protein PHAVU_008G230800g [Phas... 84 3e-16
ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi... 83 7e-16
ref|XP_006385418.1| pentatricopeptide repeat-containing family p... 80 9e-16
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-15
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-15
>ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508784720|gb|EOY31976.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 656
Score = 85.5 bits (210), Expect(2) = 4e-20
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G PDEMTLVSVL AC +LGDL+LGRW+EGFA++ IKLNSF SALI MYGKC
Sbjct: 260 GFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKC 313
Score = 38.9 bits (89), Expect(2) = 4e-20
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS MGY A E+V LF +MR G
Sbjct: 232 SWNSMISGYSKMGY-ANEAVGLFGKMREEG 260
Score = 61.6 bits (148), Expect(2) = 2e-10
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ GV PD++TLV VL+ACA++G L LG+ I+ +A G++ N F +AL+DMY KC
Sbjct: 358 KDAGVIPDKITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKC 414
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGL 469
+WNAM++GY+ G + E++ LF M+ AG+
Sbjct: 333 TWNAMITGYAQNG-MSDEAIKLFHGMKDAGV 362
>ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
cacao] gi|590581496|ref|XP_007014363.1|
Pentatricopeptide repeat superfamily protein isoform 4
[Theobroma cacao] gi|508784723|gb|EOY31979.1|
Pentatricopeptide repeat superfamily protein isoform 4
[Theobroma cacao] gi|508784726|gb|EOY31982.1|
Pentatricopeptide repeat superfamily protein isoform 4
[Theobroma cacao]
Length = 619
Score = 85.5 bits (210), Expect(2) = 4e-20
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G PDEMTLVSVL AC +LGDL+LGRW+EGFA++ IKLNSF SALI MYGKC
Sbjct: 223 GFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKC 276
Score = 38.9 bits (89), Expect(2) = 4e-20
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS MGY A E+V LF +MR G
Sbjct: 195 SWNSMISGYSKMGY-ANEAVGLFGKMREEG 223
Score = 61.6 bits (148), Expect(2) = 2e-10
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ GV PD++TLV VL+ACA++G L LG+ I+ +A G++ N F +AL+DMY KC
Sbjct: 321 KDAGVIPDKITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKC 377
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGL 469
+WNAM++GY+ G + E++ LF M+ AG+
Sbjct: 296 TWNAMITGYAQNG-MSDEAIKLFHGMKDAGV 325
>ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
cacao] gi|590581482|ref|XP_007014359.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|590581490|ref|XP_007014361.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|590581493|ref|XP_007014362.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|508784721|gb|EOY31977.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|508784722|gb|EOY31978.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|508784724|gb|EOY31980.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|508784725|gb|EOY31981.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao]
Length = 565
Score = 85.5 bits (210), Expect(2) = 4e-20
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G PDEMTLVSVL AC +LGDL+LGRW+EGFA++ IKLNSF SALI MYGKC
Sbjct: 169 GFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKC 222
Score = 38.9 bits (89), Expect(2) = 4e-20
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS MGY A E+V LF +MR G
Sbjct: 141 SWNSMISGYSKMGY-ANEAVGLFGKMREEG 169
Score = 61.6 bits (148), Expect(2) = 2e-10
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ GV PD++TLV VL+ACA++G L LG+ I+ +A G++ N F +AL+DMY KC
Sbjct: 267 KDAGVIPDKITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKC 323
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGL 469
+WNAM++GY+ G + E++ LF M+ AG+
Sbjct: 242 TWNAMITGYAQNG-MSDEAIKLFHGMKDAGV 271
>ref|XP_002318172.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222858845|gb|EEE96392.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 617
Score = 87.4 bits (215), Expect(2) = 1e-19
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEMTLVSVL AC +LGDL LGRW+EGF L+ +++NS+ GSALIDMYGKC
Sbjct: 219 EMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKC 277
Score = 35.4 bits (80), Expect(2) = 1e-19
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS MG+ E++ LF MR G
Sbjct: 196 SWNSMISGYSKMGF-TKEAIGLFMEMREEG 224
Score = 60.5 bits (145), Expect(2) = 9e-11
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G PD +T++ VL+AC+ +G L LG+W+E A + G++ + + SALIDMY KC
Sbjct: 325 GPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKC 378
Score = 32.3 bits (72), Expect(2) = 9e-11
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
+WNA+++GY+ G A+ E+++LF MR AG
Sbjct: 297 TWNAIITGYAQNG-ASNEAIVLFNGMREAG 325
>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
protein product [Vitis vinifera]
Length = 618
Score = 82.8 bits (203), Expect(2) = 2e-19
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEMTLVS+L AC +LGDL LG WIEGF ++ + LNSF GSALI MYGKC
Sbjct: 217 EMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKC 275
Score = 39.3 bits (90), Expect(2) = 2e-19
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS MGY A ++V LF MR AG
Sbjct: 194 SWNSMISGYSRMGY-AGDAVGLFGEMRDAG 222
Score = 63.2 bits (152), Expect(2) = 6e-12
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
GV PD++TLV VL+ACA++G L G+W++ +A + G++ + + +ALIDMY KC
Sbjct: 323 GVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKC 376
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGLN 472
+WNAM++GY+ G + E+++LF MR +G+N
Sbjct: 295 TWNAMITGYAQNG-VSDEAIILFSGMRESGVN 325
>ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 702
Score = 85.9 bits (211), Expect(2) = 4e-18
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEM+LVSVL AC LGDL LGRW+EGF ++ G+K+NS+ GSALI MY KC
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKC 267
Score = 31.6 bits (70), Expect(2) = 4e-18
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
SWN+++SGY+ +G+ A E+V +F R+R
Sbjct: 185 SWNSLLSGYAKLGF-AREAVEVFGRLR 210
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ GV+P+++TL +VL+ACA++G L LG+ ++ +A G++ + F +ALIDMY KC
Sbjct: 312 KENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKC 368
>gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]
Length = 619
Score = 78.6 bits (192), Expect(2) = 4e-18
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G+ P EMTLVSVL AC +LGDL+LGRW+E F ++ +++NS+ GSALI MYGKC
Sbjct: 164 EMRDDGIAPVEMTLVSVLGACGDLGDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKC 222
Score = 38.9 bits (89), Expect(2) = 4e-18
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGL 469
SWN+M+SGYS MGY A E+V LF MR G+
Sbjct: 141 SWNSMISGYSKMGY-AREAVELFGEMRDDGI 170
Score = 65.9 bits (159), Expect(2) = 1e-12
Identities = 25/57 (43%), Positives = 44/57 (77%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ G+ P+++TLV VL+ACA +G L +G+W++ FAL++G++ + + +AL+DMY KC
Sbjct: 267 KEAGINPNKITLVGVLSACAQVGALDMGKWVDNFALESGLQHDVYVATALLDMYAKC 323
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGLN 472
+WNAM+SGY+ G + E++ LF M+ AG+N
Sbjct: 242 TWNAMISGYAQNG-LSDEAIRLFGDMKEAGIN 272
>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 85.9 bits (211), Expect(2) = 4e-18
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEM+LVSVL AC LGDL LGRW+EGF ++ G+K+NS+ GSALI MY KC
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKC 267
Score = 31.6 bits (70), Expect(2) = 4e-18
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
SWN+++SGY+ +G+ A E+V +F R+R
Sbjct: 185 SWNSLLSGYAKLGF-AREAVEVFGRLR 210
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ GV+P+++TL +VL+ACA++G L LG+ ++ +A G++ + F +ALIDMY KC
Sbjct: 312 KENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKC 368
>gb|EXC36735.1| hypothetical protein L484_000436 [Morus notabilis]
Length = 311
Score = 78.6 bits (192), Expect(2) = 5e-18
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G+ P EMTLVSVL AC +LGDL+LGRW+E F ++ +++NS+ GSALI MYGKC
Sbjct: 226 EMRDDGIAPVEMTLVSVLGACGDLGDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKC 284
Score = 38.9 bits (89), Expect(2) = 5e-18
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGL 469
SWN+M+SGYS MGY A E+V LF MR G+
Sbjct: 203 SWNSMISGYSKMGY-AREAVELFGEMRDDGI 232
>ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Citrus sinensis]
Length = 580
Score = 75.5 bits (184), Expect(2) = 2e-17
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 472 PDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
PDE+TLVSVL +C +LGDL LG+W+EGF + + LN + GSALIDMYGKC
Sbjct: 221 PDEITLVSVLGSCGDLGDLVLGKWVEGFVVKNKMDLNFYMGSALIDMYGKC 271
Score = 39.7 bits (91), Expect(2) = 2e-17
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
SWN+M+SGYS MGY A E+V LF RMR
Sbjct: 190 SWNSMISGYSKMGY-AKEAVELFGRMR 215
Score = 63.5 bits (153), Expect(2) = 1e-12
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
GV PD++TL+ VL+ACA++G L LG+W++ +A G++ + F +ALIDM+ KC
Sbjct: 319 GVNPDKITLIGVLSACASIGALDLGKWVDKYASQRGLRHDIFVATALIDMHAKC 372
Score = 35.8 bits (81), Expect(2) = 1e-12
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGLN 472
+WNAM++ Y+ G + E++MLF RM+ AG+N
Sbjct: 291 TWNAMITAYAQNGLSN-EAIMLFNRMKYAGVN 321
>ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, partial [Citrus clementina]
gi|557556515|gb|ESR66529.1| hypothetical protein
CICLE_v10010788mg, partial [Citrus clementina]
Length = 572
Score = 75.5 bits (184), Expect(2) = 2e-17
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 472 PDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
PDE+TLVSVL +C +LGDL LG+W+EGF + + LN + GSALIDMYGKC
Sbjct: 218 PDEITLVSVLGSCGDLGDLVLGKWVEGFVVKNKMDLNFYMGSALIDMYGKC 268
Score = 39.7 bits (91), Expect(2) = 2e-17
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
SWN+M+SGYS MGY A E+V LF RMR
Sbjct: 187 SWNSMISGYSKMGY-AKEAVELFGRMR 212
Score = 63.5 bits (153), Expect(2) = 1e-12
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
GV PD++TL+ VL+ACA++G L LG+W++ +A G++ + F +ALIDM+ KC
Sbjct: 316 GVNPDKITLIGVLSACASIGALDLGKWVDKYASQRGLRHDIFVATALIDMHAKC 369
Score = 35.8 bits (81), Expect(2) = 1e-12
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGLN 472
+WNAM++ Y+ G + E++MLF RM+ AG+N
Sbjct: 288 TWNAMITAYAQNGLSN-EAIMLFNRMKYAGVN 318
>ref|XP_006372228.1| hypothetical protein POPTR_0018s14430g, partial [Populus
trichocarpa] gi|550318759|gb|ERP50025.1| hypothetical
protein POPTR_0018s14430g, partial [Populus trichocarpa]
Length = 385
Score = 76.3 bits (186), Expect(2) = 5e-17
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEMTLV+VL AC GDL LGRW+EG L+ +++NS+ GSALIDMYGKC
Sbjct: 137 EMREEGFEPDEMTLVNVLGAC---GDLGLGRWVEGLVLEKKMEVNSYVGSALIDMYGKC 192
Score = 37.7 bits (86), Expect(2) = 5e-17
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS MG+ A E++ LF MR G
Sbjct: 114 SWNSMISGYSKMGF-AKEAIWLFMEMREEG 142
>ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528238|gb|EEF30293.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 446
Score = 76.3 bits (186), Expect(2) = 8e-17
Identities = 35/59 (59%), Positives = 43/59 (72%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EP EMTLVS+L AC +LGDL LG+W+E D ++LNS++ SALIDMYGKC
Sbjct: 218 EMREQGFEPVEMTLVSILGACGDLGDLALGKWVEALIGDKKMELNSYTASALIDMYGKC 276
Score = 37.0 bits (84), Expect(2) = 8e-17
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGY+ MG+ A E+V LF MR G
Sbjct: 195 SWNSMISGYTKMGF-AREAVRLFMEMREQG 223
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G+ P+E+T+V VL+ACA++G L LG+W+E +A G++ + + SAL+DMY KC
Sbjct: 324 GITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKC 377
Score = 32.7 bits (73), Expect(2) = 1e-11
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGL 469
+WNAM++GY+ G A+ E++ LF MR AG+
Sbjct: 296 TWNAMITGYAQNG-ASDEAMTLFNVMREAGI 325
>ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like isoform X1 [Glycine max]
Length = 615
Score = 81.6 bits (200), Expect(2) = 1e-16
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G EPDEM+LVS+L AC LGDL LGRW+EGF ++ G+ LNS+ GSALI MY KC
Sbjct: 220 GFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKC 273
Score = 31.2 bits (69), Expect(2) = 1e-16
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 371 SCSWNAMVSGYSNMGYAAAESVMLFRRM 454
S SWN+M++GY+ G A E+V +FR M
Sbjct: 189 SVSWNSMIAGYAKAG-CAREAVEVFREM 215
Score = 47.4 bits (111), Expect(2) = 6e-06
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 466 VEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGK 621
V +++TL +VL+ACA +G L LG+ I+ +A G + + F +ALIDMY K
Sbjct: 322 VTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAK 373
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
+WNA++SGY+ G A E+++LF M+
Sbjct: 293 TWNAVISGYAQNG-MADEAILLFHGMK 318
>ref|XP_004487967.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cicer arietinum]
Length = 609
Score = 79.7 bits (195), Expect(2) = 2e-16
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEM+LVSVL AC LG+L LG+W+EGF ++ +K+NSF GSALI M+ KC
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGNLELGKWVEGFVVERDMKVNSFVGSALISMFAKC 267
Score = 32.3 bits (72), Expect(2) = 2e-16
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
SWN+M+SGY+ MG A E+V +F R+R
Sbjct: 185 SWNSMLSGYAKMG-RAKEAVEVFGRLR 210
Score = 55.1 bits (131), Expect(2) = 9e-09
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 454 ESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
+ GV P+++TL +VL+ACA++G L LG+ I+ A G + + F +ALIDMY KC
Sbjct: 312 KENGVNPNKITLTAVLSACASIGALDLGKEIDENATQRGFQHDIFVATALIDMYAKC 368
Score = 30.8 bits (68), Expect(2) = 9e-09
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAGLN 472
+WNA++SGY+ G A E++ LF M+ G+N
Sbjct: 287 TWNAVISGYAQNG-MADEAISLFHCMKENGVN 317
>ref|XP_007141849.1| hypothetical protein PHAVU_008G230800g [Phaseolus vulgaris]
gi|561014982|gb|ESW13843.1| hypothetical protein
PHAVU_008G230800g [Phaseolus vulgaris]
Length = 610
Score = 84.0 bits (206), Expect(2) = 3e-16
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G EPDEM+LVSVL AC LGDL LGRW+EGF ++ G+ LNSF GSALI MY KC
Sbjct: 215 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMALNSFVGSALISMYAKC 268
Score = 27.3 bits (59), Expect(2) = 3e-16
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRM 454
SWN+M++GY+ G A E+V +F M
Sbjct: 186 SWNSMIAGYAKAG-CAKEAVEVFGEM 210
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +1
Query: 466 VEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
V+ +++TL +VL+ACA +G L LG+ I +A G + + F +ALIDMY KC
Sbjct: 317 VKENKITLTAVLSACATIGALDLGKQINEYASQRGFQHDIFVATALIDMYAKC 369
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
+WNA++SGY+ G A E++ LF M+
Sbjct: 288 TWNAVISGYAQNG-MADEAISLFHAMK 313
>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like isoform X1 [Glycine max]
Length = 608
Score = 82.8 bits (203), Expect(2) = 7e-16
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +1
Query: 463 GVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
G EPDEM+LVSVL AC LGDL LGRW+EGF ++ G+ LNS+ GSALI MY KC
Sbjct: 213 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKC 266
Score = 27.3 bits (59), Expect(2) = 7e-16
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRM 454
SWN+M++GY+ G A E+V +F M
Sbjct: 184 SWNSMIAGYAKAG-CAREAVEVFGEM 208
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +1
Query: 466 VEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
V +++TL +VL+ACA +G L LG+ I+ +A G + + F +ALIDMY KC
Sbjct: 315 VTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKC 367
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMR 457
+WNA++SGY+ G A E++ LF M+
Sbjct: 286 TWNAVISGYAQNG-MADEAISLFHAMK 311
>ref|XP_006385418.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342379|gb|ERP63215.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 417
Score = 80.5 bits (197), Expect(2) = 9e-16
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G EPDEMTLVSVL AC GDL LGRW+EGF L+ +++NS+ GSALIDMYGKC
Sbjct: 138 EMREKGFEPDEMTLVSVLGAC---GDLGLGRWVEGFVLEKKVEVNSYVGSALIDMYGKC 193
Score = 29.3 bits (64), Expect(2) = 9e-16
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS + A ++ LF MR G
Sbjct: 115 SWNSMISGYSKTSF-AKKAFGLFMEMREKG 143
>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G +P+EM+LVSVL AC LGDL LG W+E F ++ + LN F GSALI MYGKC
Sbjct: 218 EMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKC 276
Score = 36.2 bits (82), Expect(2) = 2e-15
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS M + A E+V LFR M AG
Sbjct: 195 SWNSMISGYSKMRH-AGEAVGLFREMMEAG 223
Score = 57.0 bits (136), Expect(2) = 6e-09
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +1
Query: 472 PDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
PD++TL+ +L+ACA++G L LG+ +E +A + G + + + G+AL+DMY KC
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKC 377
Score = 29.6 bits (65), Expect(2) = 6e-09
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVA 463
+WNAM++GY+ G + E++ LF+ MR++
Sbjct: 296 TWNAMITGYAQNG-MSEEAIKLFQDMRMS 323
>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +1
Query: 448 ENESGGVEPDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
E G +P+EM+LVSVL AC LGDL LG W+E F ++ + LN F GSALI MYGKC
Sbjct: 218 EMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKC 276
Score = 36.2 bits (82), Expect(2) = 2e-15
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVAG 466
SWN+M+SGYS M + A E+V LFR M AG
Sbjct: 195 SWNSMISGYSKMRH-AGEAVGLFREMMEAG 223
Score = 57.0 bits (136), Expect(2) = 6e-09
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +1
Query: 472 PDEMTLVSVLAACANLGDLTLGRWIEGFALDAGIKLNSFSGSALIDMYGKC 624
PD++TL+ +L+ACA++G L LG+ +E +A + G + + + G+AL+DMY KC
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKC 377
Score = 29.6 bits (65), Expect(2) = 6e-09
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 377 SWNAMVSGYSNMGYAAAESVMLFRRMRVA 463
+WNAM++GY+ G + E++ LF+ MR++
Sbjct: 296 TWNAMITGYAQNG-MSEEAIKLFQDMRMS 323