BLASTX nr result

ID: Cocculus23_contig00047055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00047055
         (263 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481053.1| PREDICTED: omega-3 fatty acid desaturase, ch...    70   4e-10
ref|XP_006429411.1| hypothetical protein CICLE_v10011691mg [Citr...    70   4e-10
ref|XP_006429410.1| hypothetical protein CICLE_v10011691mg [Citr...    70   4e-10
ref|XP_006429409.1| hypothetical protein CICLE_v10011691mg [Citr...    70   4e-10
ref|XP_006429408.1| hypothetical protein CICLE_v10011691mg [Citr...    70   4e-10
ref|XP_006429407.1| hypothetical protein CICLE_v10011691mg [Citr...    70   4e-10
gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var....    70   4e-10
gb|EPS57432.1| chloroplast omega-3 fatty acid desaturase, partia...    69   9e-10
dbj|BAE79800.1| omega-3-desaturase [Cyclamen persicum]                 69   9e-10
dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum...    69   9e-10
gb|AAA86690.1| delta-15 lineoyl desaturase [Limnanthes douglasii]      68   2e-09
gb|AAN17502.1| omega-3 fatty acid desaturase [Betula pendula]          68   2e-09
gb|AAF27933.1|AF222989_1 omega-3 fatty acid desaturase [Capsicum...    67   3e-09
sp|P48620.1|FAD3C_SESIN RecName: Full=Omega-3 fatty acid desatur...    67   3e-09
gb|AHE41324.1| chloroplast omega-3 fatty acid desaturase, partia...    67   3e-09
gb|AAB72241.1| omega-3 fatty acid desaturase [Petroselinum crispum]    67   3e-09
ref|XP_002323585.1| omega-3 desaturase family protein [Populus t...    67   3e-09
gb|ABK96470.1| unknown [Populus trichocarpa x Populus deltoides]       67   3e-09
ref|NP_187727.1| fatty acid desaturase 7 [Arabidopsis thaliana] ...    66   6e-09
gb|ADK23939.1| 3FAD [Gossypium hirsutum]                               66   6e-09

>ref|XP_006481053.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
           [Citrus sinensis]
          Length = 457

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>ref|XP_006429411.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
           gi|567873645|ref|XP_006429412.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
           gi|557531468|gb|ESR42651.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
           gi|557531469|gb|ESR42652.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
          Length = 354

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>ref|XP_006429410.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
           gi|557531467|gb|ESR42650.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
          Length = 256

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>ref|XP_006429409.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
           gi|557531466|gb|ESR42649.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
          Length = 457

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>ref|XP_006429408.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
           gi|557531465|gb|ESR42648.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
          Length = 430

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>ref|XP_006429407.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
           gi|557531464|gb|ESR42647.1| hypothetical protein
           CICLE_v10011691mg [Citrus clementina]
          Length = 334

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]
          Length = 457

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHSSILVPYHGW +
Sbjct: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210


>gb|EPS57432.1| chloroplast omega-3 fatty acid desaturase, partial [Genlisea aurea]
          Length = 209

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSNDHKLNSVVGH+LHS+ILVPYHGW +
Sbjct: 163 GHGSFSNDHKLNSVVGHLLHSAILVPYHGWRI 194


>dbj|BAE79800.1| omega-3-desaturase [Cyclamen persicum]
          Length = 435

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+HKLNSVVGHILHSSILVPYHGW +
Sbjct: 157 GHGSFSNNHKLNSVVGHILHSSILVPYHGWRI 188


>dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum]
           gi|21668486|dbj|BAC01274.1| plastid omega-3 fatty acid
           desaturase [Nicotiana tabacum]
          Length = 441

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+HKLNSVVGHILHSSILVPYHGW +
Sbjct: 165 GHGSFSNNHKLNSVVGHILHSSILVPYHGWRI 196


>gb|AAA86690.1| delta-15 lineoyl desaturase [Limnanthes douglasii]
          Length = 436

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+HKLNSVVGH+LHSSILVPYHGW +
Sbjct: 158 GHGSFSNNHKLNSVVGHLLHSSILVPYHGWRI 189


>gb|AAN17502.1| omega-3 fatty acid desaturase [Betula pendula]
          Length = 455

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+HKLNSVVGH+LHSSILVPYHGW +
Sbjct: 177 GHGSFSNNHKLNSVVGHLLHSSILVPYHGWRI 208


>gb|AAF27933.1|AF222989_1 omega-3 fatty acid desaturase [Capsicum annuum]
          Length = 438

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+HKLNSV GHILHSSILVPYHGW +
Sbjct: 158 GHGSFSNNHKLNSVAGHILHSSILVPYHGWRI 189


>sp|P48620.1|FAD3C_SESIN RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags:
           Precursor gi|870784|gb|AAA70334.1| omega-3 fatty acid
           desaturase [Sesamum indicum]
          Length = 447

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSND KLNSVVGHILHSSILVPYHGW +
Sbjct: 170 GHGSFSNDPKLNSVVGHILHSSILVPYHGWRI 201


>gb|AHE41324.1| chloroplast omega-3 fatty acid desaturase, partial [Sesamum
           radiatum]
          Length = 433

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSND KLNSVVGHILHSSILVPYHGW +
Sbjct: 102 GHGSFSNDPKLNSVVGHILHSSILVPYHGWRI 133


>gb|AAB72241.1| omega-3 fatty acid desaturase [Petroselinum crispum]
          Length = 438

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSND KLNSVVGHILHSSILVPYHGW +
Sbjct: 162 GHGSFSNDAKLNSVVGHILHSSILVPYHGWRI 193


>ref|XP_002323585.1| omega-3 desaturase family protein [Populus trichocarpa]
           gi|222868215|gb|EEF05346.1| omega-3 desaturase family
           protein [Populus trichocarpa]
          Length = 452

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+H LNSVVGHILHSSILVPYHGW +
Sbjct: 174 GHGSFSNNHNLNSVVGHILHSSILVPYHGWRI 205


>gb|ABK96470.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 452

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSN+H LNSVVGHILHSSILVPYHGW +
Sbjct: 174 GHGSFSNNHNLNSVVGHILHSSILVPYHGWRI 205


>ref|NP_187727.1| fatty acid desaturase 7 [Arabidopsis thaliana]
           gi|1169599|sp|P46310.1|FAD3C_ARATH RecName: Full=Omega-3
           fatty acid desaturase, chloroplastic; Flags: Precursor
           gi|6016681|gb|AAF01508.1|AC009991_4 omega-3 fatty acid
           desaturase, chloroplast precursor [Arabidopsis thaliana]
           gi|12321881|gb|AAG50977.1|AC073395_19 omega-3 fatty acid
           desaturase, chloroplast precursor; 37125-39292
           [Arabidopsis thaliana] gi|408481|gb|AAA61773.1| omega-3
           fatty acid desaturase [Arabidopsis thaliana]
           gi|468434|dbj|BAA05040.1| plastid fatty acid desaturase
           [Arabidopsis thaliana] gi|541653|dbj|BAA03106.1|
           omega-3-desaturase [Arabidopsis thaliana]
           gi|332641488|gb|AEE75009.1| fatty acid desaturase 7
           [Arabidopsis thaliana]
          Length = 446

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSND KLNSVVGH+LHSSILVPYHGW +
Sbjct: 166 GHGSFSNDPKLNSVVGHLLHSSILVPYHGWRI 197


>gb|ADK23939.1| 3FAD [Gossypium hirsutum]
          Length = 446

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 261 GHGSFSNDHKLNSVVGHILHSSILVPYHGWLV 166
           GHGSFSND KLNSVVGH+LHSSILVPYHGW +
Sbjct: 170 GHGSFSNDPKLNSVVGHLLHSSILVPYHGWRI 201


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