BLASTX nr result
ID: Cocculus23_contig00046492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00046492
(260 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 138 9e-31
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 138 9e-31
ref|XP_002512521.1| pentatricopeptide repeat-containing protein,... 130 1e-28
ref|XP_006382375.1| hypothetical protein POPTR_0005s01560g [Popu... 130 2e-28
ref|XP_007207048.1| hypothetical protein PRUPE_ppb025182mg [Prun... 129 4e-28
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis] 129 6e-28
ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
ref|XP_006433546.1| hypothetical protein CICLE_v10003403mg [Citr... 122 7e-26
gb|EYU44055.1| hypothetical protein MIMGU_mgv1a002435mg [Mimulus... 121 9e-26
emb|CBI39605.3| unnamed protein product [Vitis vinifera] 109 5e-22
ref|XP_007014547.1| Pentatricopeptide repeat protein isoform 2 [... 107 2e-21
ref|XP_007014546.1| Pentatricopeptide repeat protein isoform 1 [... 107 2e-21
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Popu... 106 4e-21
ref|XP_004500093.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfam... 105 9e-21
dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 9e-21
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu... 105 9e-21
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 138 bits (347), Expect = 9e-31
Identities = 61/86 (70%), Positives = 76/86 (88%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
RDEISWSAMIDGYI++GC+ EAL +FH+MQ+ +R RK +L SVL+ACAN+GALD+GRWI
Sbjct: 265 RDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWI 324
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
H Y ++NSI+LD +LGTSLVDMYAKC
Sbjct: 325 HTYAKRNSIQLDGVLGTSLVDMYAKC 350
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 138 bits (347), Expect = 9e-31
Identities = 61/86 (70%), Positives = 76/86 (88%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
RDEISWSAMIDGYI++GC+ EAL +FH+MQ+ +R RK +L SVL+ACAN+GALD+GRWI
Sbjct: 266 RDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWI 325
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
H Y ++NSI+LD +LGTSLVDMYAKC
Sbjct: 326 HTYAKRNSIQLDGVLGTSLVDMYAKC 351
>ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548482|gb|EEF49973.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 422
Score = 130 bits (328), Expect = 1e-28
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+DEISWS+MIDGYIK G YKEAL VF+ MQ +R +K +LSSVLAACAN+GALD+GRWI
Sbjct: 255 KDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAACANLGALDQGRWI 314
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY +KN + LDA+LGT+LVDMYAKC
Sbjct: 315 HAYVKKNPMYLDAVLGTALVDMYAKC 340
>ref|XP_006382375.1| hypothetical protein POPTR_0005s01560g [Populus trichocarpa]
gi|550337735|gb|ERP60172.1| hypothetical protein
POPTR_0005s01560g [Populus trichocarpa]
Length = 545
Score = 130 bits (327), Expect = 2e-28
Identities = 63/86 (73%), Positives = 72/86 (83%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
++EISWSAMIDGYIK G YKEAL VF+ MQR +R RK +LSSVLAACAN+GALD+GRWI
Sbjct: 136 KNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWI 195
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY NS DA+LGT+LVDMYAKC
Sbjct: 196 HAYVNNNSNSFDAVLGTALVDMYAKC 221
>ref|XP_007207048.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
gi|462402690|gb|EMJ08247.1| hypothetical protein
PRUPE_ppb025182mg [Prunus persica]
Length = 672
Score = 129 bits (324), Expect = 4e-28
Identities = 57/87 (65%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRL-RKTLLSSVLAACANVGALDEGRW 177
+DEISWSAM+DGYIK+GC+KEAL +F+EMQ+ + RK +LSSVLAACAN+GA+D+G+W
Sbjct: 262 KDEISWSAMVDGYIKRGCHKEALEIFNEMQKENLLSPRKFILSSVLAACANMGAVDQGKW 321
Query: 178 IHAYTRKNSIELDAILGTSLVDMYAKC 258
+HAY ++N+I+LDA+LG +L+DMYAKC
Sbjct: 322 VHAYIKRNTIQLDAVLGAALLDMYAKC 348
>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 129 bits (324), Expect = 4e-28
Identities = 57/86 (66%), Positives = 74/86 (86%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
RDEISWS+M+DGYI G YKEAL +F +MQR R + +LSSVLAAC+N+GA+D+GRW+
Sbjct: 257 RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV 316
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY ++NSI+LDA+LGT+L+DMYAKC
Sbjct: 317 HAYLKRNSIKLDAVLGTALLDMYAKC 342
>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 129 bits (324), Expect = 4e-28
Identities = 57/86 (66%), Positives = 74/86 (86%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
RDEISWS+M+DGYI G YKEAL +F +MQR R + +LSSVLAAC+N+GA+D+GRW+
Sbjct: 257 RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV 316
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY ++NSI+LDA+LGT+L+DMYAKC
Sbjct: 317 HAYLKRNSIKLDAVLGTALLDMYAKC 342
>gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis]
Length = 616
Score = 129 bits (323), Expect = 6e-28
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
RDEISWSA+ +GYIK G +KEAL VF+ MQR G+ RK +LSSVLAACANVGALD+GRWI
Sbjct: 285 RDEISWSAITNGYIKGGYFKEALEVFYLMQREGIGPRKFILSSVLAACANVGALDQGRWI 344
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY +N I +DA+LGT+L+DMYAKC
Sbjct: 345 HAYVERNLIRVDAVLGTALLDMYAKC 370
>ref|XP_004304899.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 126 bits (317), Expect = 3e-27
Identities = 60/87 (68%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRL-RKTLLSSVLAACANVGALDEGRW 177
RDEISWSAMIDGY++ G +KEAL VF+EMQ+ + K +LSSVLAACANVGALD+G+W
Sbjct: 263 RDEISWSAMIDGYVQGGYHKEALEVFNEMQKEKIASPSKFVLSSVLAACANVGALDQGKW 322
Query: 178 IHAYTRKNSIELDAILGTSLVDMYAKC 258
+H Y +KNSI++DA+LGT+LVDMYAKC
Sbjct: 323 VHGYIKKNSIQVDAVLGTALVDMYAKC 349
>ref|XP_006433546.1| hypothetical protein CICLE_v10003403mg [Citrus clementina]
gi|557535668|gb|ESR46786.1| hypothetical protein
CICLE_v10003403mg [Citrus clementina]
Length = 558
Score = 122 bits (305), Expect = 7e-26
Identities = 57/86 (66%), Positives = 73/86 (84%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+DEI+WSA+IDGY K G YKEAL VF+EMQR ++ RK +LS VLAACA++GALD+G WI
Sbjct: 163 KDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWI 222
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
H + ++NSI +DA+LGT+LVDMYAKC
Sbjct: 223 HDHVKRNSICVDAVLGTALVDMYAKC 248
>gb|EYU44055.1| hypothetical protein MIMGU_mgv1a002435mg [Mimulus guttatus]
Length = 675
Score = 121 bits (304), Expect = 9e-26
Identities = 55/86 (63%), Positives = 69/86 (80%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+D+++WSAMIDGY K G +KEAL VF +MQR + L K +LSS LA CAN+GALD+G+WI
Sbjct: 264 KDDVTWSAMIDGYNKNGYFKEALEVFGQMQREEIELSKFVLSSALAVCANIGALDQGKWI 323
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY R+ + LD ILGTS+VDMYAKC
Sbjct: 324 HAYIRRKKMTLDEILGTSMVDMYAKC 349
>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 109 bits (272), Expect = 5e-22
Identities = 47/72 (65%), Positives = 62/72 (86%)
Frame = +1
Query: 43 KQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWIHAYTRKNSIELDAI 222
++GC+ EAL +FH+MQ+ +R RK +L SVL+ACAN+GALD+GRWIH Y ++NSI+LD +
Sbjct: 231 RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 290
Query: 223 LGTSLVDMYAKC 258
LGTSLVDMYAKC
Sbjct: 291 LGTSLVDMYAKC 302
>ref|XP_007014547.1| Pentatricopeptide repeat protein isoform 2 [Theobroma cacao]
gi|508784910|gb|EOY32166.1| Pentatricopeptide repeat
protein isoform 2 [Theobroma cacao]
Length = 511
Score = 107 bits (267), Expect = 2e-21
Identities = 48/86 (55%), Positives = 65/86 (75%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
R+ +SWSAMI GY++ G ++EA+ +F++MQ SG+R + L ACA +GALD GRWI
Sbjct: 181 RNAVSWSAMITGYVQMGMFREAMGLFNDMQLSGLRPNHAGIVGALTACAFLGALDHGRWI 240
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY +N +ELD +LGT+LVDMYAKC
Sbjct: 241 HAYVDRNGMELDRVLGTALVDMYAKC 266
>ref|XP_007014546.1| Pentatricopeptide repeat protein isoform 1 [Theobroma cacao]
gi|508784909|gb|EOY32165.1| Pentatricopeptide repeat
protein isoform 1 [Theobroma cacao]
Length = 537
Score = 107 bits (267), Expect = 2e-21
Identities = 48/86 (55%), Positives = 65/86 (75%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
R+ +SWSAMI GY++ G ++EA+ +F++MQ SG+R + L ACA +GALD GRWI
Sbjct: 207 RNAVSWSAMITGYVQMGMFREAMGLFNDMQLSGLRPNHAGIVGALTACAFLGALDHGRWI 266
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY +N +ELD +LGT+LVDMYAKC
Sbjct: 267 HAYVDRNGMELDRVLGTALVDMYAKC 292
>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 107 bits (266), Expect = 2e-21
Identities = 44/86 (51%), Positives = 66/86 (76%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+D +SWSA+I GY + C+ E L +FHEMQ +R +T+L SV++AC ++ ALD+G+W+
Sbjct: 399 KDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWV 458
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY RKN ++++ ILGT+L+DMY KC
Sbjct: 459 HAYIRKNGLKVNVILGTTLLDMYMKC 484
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+D +SWSA+I GY + G Y+EAL++F EM +G+RL + ++ SVL+ACA++ + G+ I
Sbjct: 267 KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMI 326
Query: 181 HAYTRKNSIELDAILGTSLVDMYA 252
H + IE L +L+ MY+
Sbjct: 327 HGLVIRMGIESYVNLQNALIHMYS 350
>ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Populus trichocarpa]
gi|550319085|gb|ERP50257.1| hypothetical protein
POPTR_0017s01850g [Populus trichocarpa]
Length = 446
Score = 106 bits (264), Expect = 4e-21
Identities = 46/86 (53%), Positives = 66/86 (76%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
++ +SW A+I GY++ G +KEAL VF++MQ SG RL + + L ACA +GALD+GRWI
Sbjct: 125 KNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWI 184
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY +++ + LD +LGT+L+DMYAKC
Sbjct: 185 HAYVKRHHMSLDRMLGTALIDMYAKC 210
>ref|XP_004500093.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502128825|ref|XP_004500094.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 785
Score = 106 bits (264), Expect = 4e-21
Identities = 46/86 (53%), Positives = 63/86 (73%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+D +SWSAMI GY + GC+ EA+ +F EMQ G+R +T L SV++AC + ALD G+WI
Sbjct: 376 KDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETALVSVISACTQMAALDLGKWI 435
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY KN + ++ ILGT+L+DMY KC
Sbjct: 436 HAYISKNKLRVNVILGTTLIDMYMKC 461
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
+D +SWSAMI Y + G +EALI+F +M +GV + + ++ S ++A ++ + GR +
Sbjct: 244 KDMVSWSAMISCYEQNGMSEEALILFVDMNANGVMVDEVVMVSAISASTSLSVVGMGRSV 303
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
H K I+ L +L+ +Y+ C
Sbjct: 304 HGLAAKVGIQDYVSLQNALIHLYSSC 329
>ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508699158|gb|EOX91054.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 529
Score = 105 bits (261), Expect = 9e-21
Identities = 47/86 (54%), Positives = 64/86 (74%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
++ ISW+ MI GY+ G YKEAL +FHEMQ GV+ L+S L+AC+++GALD+GRWI
Sbjct: 213 KNVISWTTMISGYVGAGMYKEALNLFHEMQIEGVKPDNVALASTLSACSHLGALDQGRWI 272
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY + +E+D ILG L+DM+AKC
Sbjct: 273 HAYIDRIGVEIDPILGCVLIDMFAKC 298
>dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 105 bits (261), Expect = 9e-21
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
R+ +SWSAM++GY++ G +EAL VF +MQ GVR T+L VLAACA +GAL++G+W+
Sbjct: 188 RNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWV 247
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
H Y + N+I + LGT+LVDMYAKC
Sbjct: 248 HGYLKANNIRMTVFLGTALVDMYAKC 273
>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 532
Score = 105 bits (261), Expect = 9e-21
Identities = 46/86 (53%), Positives = 64/86 (74%)
Frame = +1
Query: 1 RDEISWSAMIDGYIKQGCYKEALIVFHEMQRSGVRLRKTLLSSVLAACANVGALDEGRWI 180
R+E+SWSAMI GY+ G ++EAL +F+++Q +G+R + L AC+ +G+LD GRWI
Sbjct: 203 RNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGRWI 262
Query: 181 HAYTRKNSIELDAILGTSLVDMYAKC 258
HAY +N ELD +LGT+LVDMYAKC
Sbjct: 263 HAYVDRNGTELDRVLGTALVDMYAKC 288