BLASTX nr result
ID: Cocculus23_contig00046071
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00046071
(630 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi... 283 3e-74
ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containi... 239 4e-61
ref|XP_004966763.1| PREDICTED: pentatricopeptide repeat-containi... 190 3e-46
gb|EMT21135.1| Pentatricopeptide repeat-containing protein [Aegi... 189 6e-46
ref|XP_002438055.1| hypothetical protein SORBIDRAFT_10g007350 [S... 187 2e-45
gb|EXC35167.1| hypothetical protein L484_022720 [Morus notabilis] 185 1e-44
ref|XP_003564095.1| PREDICTED: pentatricopeptide repeat-containi... 185 1e-44
ref|NP_001057146.1| Os06g0216400 [Oryza sativa Japonica Group] g... 182 9e-44
gb|EEC80230.1| hypothetical protein OsI_22164 [Oryza sativa Indi... 181 2e-43
dbj|BAK02250.1| predicted protein [Hordeum vulgare subsp. vulgare] 180 4e-43
ref|NP_001141635.2| hypothetical protein [Zea mays] gi|238908843... 176 4e-42
ref|XP_003521411.2| PREDICTED: putative pentatricopeptide repeat... 170 3e-40
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat... 169 5e-40
gb|EYU37582.1| hypothetical protein MIMGU_mgv1a024354mg, partial... 169 8e-40
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,... 165 9e-39
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi... 165 9e-39
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr... 165 1e-38
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi... 165 1e-38
ref|XP_002870540.1| pentatricopeptide repeat-containing protein ... 164 2e-38
gb|EEE66913.1| hypothetical protein OsJ_23761 [Oryza sativa Japo... 164 2e-38
>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 283 bits (724), Expect = 3e-74
Identities = 137/208 (65%), Positives = 167/208 (80%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
+F+++L +CA +LG A HCQI+KMGFE DM LQTGLL+FYAKVG+L A++VF M
Sbjct: 12 SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGM 71
Query: 186 PERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIFD 365
P RDVVA NA+I+AL +GY+ +AR LFD M+ER SWN+M+TCYCK GDI +ARL+FD
Sbjct: 72 PRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFD 131
Query: 366 LNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAIS 545
NP+K+ VSWNA+IDGYCKS QL+ A+ELF G+ +N VTWNTMIS YVQ EFG AIS
Sbjct: 132 CNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAIS 191
Query: 546 TFQQMQADNVKPTEATMVSLLSACAHLG 629
FQQMQ++NVKPTE TMVSLLSACAHLG
Sbjct: 192 MFQQMQSENVKPTEVTMVSLLSACAHLG 219
>ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 536
Score = 239 bits (611), Expect = 4e-61
Identities = 116/181 (64%), Positives = 144/181 (79%)
Frame = +3
Query: 87 MGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKL 266
MGFE D+ L TGLL+FYAKVG+LG A +VF EMPERDV+A NA+I+A G + +A++L
Sbjct: 1 MGFEFDVILLTGLLDFYAKVGDLGSARKVFVEMPERDVIATNAMISAFSRYGCVEEAKQL 60
Query: 267 FDEMSERTPSSWNTMMTCYCKSGDIEAARLIFDLNPIKNAVSWNAMIDGYCKSNQLMLAR 446
F+ MS+R +SWN+++TCYCKS ++ ARLIFD NP+K+ VSWNAMIDGYCKS Q++ A
Sbjct: 61 FENMSQRNSASWNSLITCYCKSSEVHNARLIFDRNPMKDVVSWNAMIDGYCKSEQMVKAD 120
Query: 447 ELFDCAGALKNVVTWNTMISGYVQYREFGRAISTFQQMQADNVKPTEATMVSLLSACAHL 626
ELF +KNVVTWNTMI+GYVQ EF RAI+ FQ+M + VKPTE TMVSLLSACAHL
Sbjct: 121 ELFVEMEFMKNVVTWNTMIAGYVQCGEFVRAINLFQRMLREEVKPTEVTMVSLLSACAHL 180
Query: 627 G 629
G
Sbjct: 181 G 181
Score = 60.1 bits (144), Expect = 5e-07
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 9/183 (4%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
T +L ACA L A +G IH I D L L++ Y K G + A QVF+ +
Sbjct: 169 TMVSLLSACAHLGALDMGEWIHGYIRTKKIMIDFILGNALIDMYFKCGNVEAAIQVFHGL 228
Query: 186 PERDVVAQNALIAALGMNGYLSDARKLFDEMSER--TPSSWNTM-MTCYCK-SGDIEAAR 353
+R++ N++I LGM+GY +A F M P + + C C SG + R
Sbjct: 229 HDRNIFCWNSVIIGLGMHGYGKEAVDAFIAMEREGIKPDGVTFVGLLCSCSHSGLVSVGR 288
Query: 354 LIFDLNPIKNAVS-----WNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQ 518
F I + + MID +S L A EL N V W ++ +
Sbjct: 289 SYFSEMKIVYGIEPGIEHYGCMIDLLGRSGCLQEALELIKSMPMKPNAVVWGGLLRACHK 348
Query: 519 YRE 527
+++
Sbjct: 349 HKD 351
>ref|XP_004966763.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Setaria italica]
Length = 478
Score = 190 bits (483), Expect = 3e-46
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 14/215 (6%)
Frame = +3
Query: 27 ACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVA 206
ACAG + A+H K+G SD+ L T LL YA+ G L PA+ +F+EMP RDVVA
Sbjct: 15 ACAGCREAQ---ALHSLAWKLGLASDVVLATALLTRYARRGLLAPAQWLFDEMPRRDVVA 71
Query: 207 QNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIFDLN---PI 377
NA++AALG G ++DAR+LFD M ERTP+SWNTM+TCYC++GD+ +ARL+F+ +
Sbjct: 72 FNAMLAALGAAGRVADARELFDRMLERTPASWNTMVTCYCRAGDLGSARLVFEASLRAGR 131
Query: 378 KNAVSWNAMIDGYCKSNQLMLARELFDCAG-ALKNVVTWNTMISGYVQYREFGRAISTF- 551
+ VSWNAMIDGYCK+ ++ AR+LFD G +L +VVTWNT+++GY+ + AI+ F
Sbjct: 132 SSVVSWNAMIDGYCKAGRMDAARDLFDRMGSSLPDVVTWNTVMAGYLHRGDPATAIAIFH 191
Query: 552 ---------QQMQADNVKPTEATMVSLLSACAHLG 629
Q+ + +KPT TM + ++AC +G
Sbjct: 192 RLMHVYQQQQRQEEHKLKPTTVTMATAVTACTQVG 226
Score = 68.9 bits (167), Expect = 1e-09
Identities = 63/228 (27%), Positives = 86/228 (37%), Gaps = 59/228 (25%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFN---EMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTP 293
++ Y + G+LG A VF VV+ NA+I G + AR LFD M P
Sbjct: 106 MVTCYCRAGDLGSARLVFEASLRAGRSSVVSWNAMIDGYCKAGRMDAARDLFDRMGSSLP 165
Query: 294 S--SWNTMMTCYCKSGDIEAARLIFD----------------LNPIK------------- 380
+WNT+M Y GD A IF L P
Sbjct: 166 DVVTWNTVMAGYLHRGDPATAIAIFHRLMHVYQQQQRQEEHKLKPTTVTMATAVTACTQV 225
Query: 381 --------------------NAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTM 500
+AV NA++D Y K + A ++F N+ WNT+
Sbjct: 226 GDFALGRRIHLQIRHQGTRTDAVLSNALMDMYFKCGSVDGALDVFRTMPCRPNLFCWNTV 285
Query: 501 ISGYVQYREFGRAISTFQQM-----QADNVKPTEATMVSLLSACAHLG 629
I+G A++ F M DNVKP T V++LSAC+H G
Sbjct: 286 IAGLGMNGRGEDAVAAFHDMVEGRPNGDNVKPDGVTFVAVLSACSHSG 333
Score = 61.6 bits (148), Expect = 2e-07
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
T + AC + LG IH QI G +D L L++ Y K G + A VF M
Sbjct: 214 TMATAVTACTQVGDFALGRRIHLQIRHQGTRTDAVLSNALMDMYFKCGSVDGALDVFRTM 273
Query: 186 PER-DVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWN---------TMMTCYCKSG 335
P R ++ N +IA LGMNG DA F +M E P+ N +++ SG
Sbjct: 274 PCRPNLFCWNTVIAGLGMNGRGEDAVAAFHDMVEGRPNGDNVKPDGVTFVAVLSACSHSG 333
Query: 336 DIEAARLIF-DLNPIKNAV----SWNAMIDGYCKS 425
+ A R +F D+ P+ + M D C++
Sbjct: 334 LVPAGRKLFTDMLPVHGVAPRTEHYGCMADLLCRA 368
>gb|EMT21135.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 469
Score = 189 bits (480), Expect = 6e-46
Identities = 95/213 (44%), Positives = 146/213 (68%), Gaps = 9/213 (4%)
Frame = +3
Query: 18 VLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERD 197
+L A G + A+HC + K+G SD+ L T LL Y + G L PA+++F+EMP RD
Sbjct: 13 ILRAVTGCRGRREEQALHCLVCKLGLASDVVLATALLVRYGRRGLLAPAQRLFDEMPRRD 72
Query: 198 VVAQNALIAALGMNGYLSDARKLFDEM--SERTPSSWNTMMTCYCKSGDIEAARLIFDLN 371
VA NA++AALG +G +DAR+LFD M +RTP+SWNT++TCYC+ GD+ +AR +F+ +
Sbjct: 73 AVAFNAMLAALGASGRAADARRLFDRMPGPDRTPASWNTLLTCYCRVGDLASARAVFEAS 132
Query: 372 ---PIKNAVSWNAMIDGYCKSNQLMLARELFDCAG-ALKNVVTWNTMISGYVQYREFGRA 539
+AVSWNAM+DGYCK+ ++ ARELFD G +L++VVT+NTM++GY++ + A
Sbjct: 133 LRAATSSAVSWNAMVDGYCKAGRMDAARELFDRMGSSLRDVVTYNTMMAGYLRRGDPAAA 192
Query: 540 ISTFQQMQADN---VKPTEATMVSLLSACAHLG 629
I+ F+++ D +PT T+ ++++AC +G
Sbjct: 193 IAMFRRLTQDEGQAPRPTAVTIATVVTACTQVG 225
Score = 65.9 bits (159), Expect = 1e-08
Identities = 62/223 (27%), Positives = 89/223 (39%), Gaps = 54/223 (24%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFN---EMPERDVVAQNALIAALGMNGYLSDARKLFDEM--SER 287
LL Y +VG+L A VF V+ NA++ G + AR+LFD M S R
Sbjct: 112 LLTCYCRVGDLASARAVFEASLRAATSSAVSWNAMVDGYCKAGRMDAARELFDRMGSSLR 171
Query: 288 TPSSWNTMMTCYCKSGDIEAARLIFD---------------------------------- 365
++NTMM Y + GD AA +F
Sbjct: 172 DVVTYNTMMAGYLRRGDPAAAIAMFRRLTQDEGQAPRPTAVTIATVVTACTQVGDFGFGR 231
Query: 366 ---------LNPIKNAVSWNAMIDGYCKSNQLMLARELFDCA-GALKNVVTWNTMISGYV 515
L +AV NA++D Y K + A E+F N+ WNT+I+G
Sbjct: 232 AVHLSTRQLLGTSTDAVLSNALMDMYFKCGSVDRALEVFSAMPSGAPNLFCWNTVIAGLG 291
Query: 516 QYREFGRAISTFQQM-----QADNVKPTEATMVSLLSACAHLG 629
+ A+ F+ M + + V+P T V+LLSAC+H G
Sbjct: 292 RNGRGEDAVRAFRDMVETSNKNNEVRPDSVTFVALLSACSHSG 334
>ref|XP_002438055.1| hypothetical protein SORBIDRAFT_10g007350 [Sorghum bicolor]
gi|241916278|gb|EER89422.1| hypothetical protein
SORBIDRAFT_10g007350 [Sorghum bicolor]
Length = 587
Score = 187 bits (476), Expect = 2e-45
Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 10/214 (4%)
Frame = +3
Query: 18 VLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERD 197
+L A ++ + A+H K+G SDM + T LL YAK G + A++VF+EMP RD
Sbjct: 13 LLRAITACTSCREAQALHSLACKLGLASDMVISTALLTRYAKRGLVARAQRVFDEMPRRD 72
Query: 198 VVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIFDLN-- 371
VVA NA++AALG G ++DAR LF MS RTP+SWNTM+TCYC++GD+ +AR +F+ +
Sbjct: 73 VVAINAMLAALGATGRVTDARALFGRMSYRTPASWNTMVTCYCRAGDLTSARDVFEASLR 132
Query: 372 -PIKNAVSWNAMIDGYCKSNQLMLARELFDCAG-ALKNVVTWNTMISGYVQYREFGRAIS 545
+ VSWNAMIDGYCK+ ++ ARELFD G +L +V+TWNTM++GY++ + AI+
Sbjct: 133 AMSSSVVSWNAMIDGYCKAGRMDAARELFDRMGSSLPDVITWNTMMAGYLRGGDPASAIA 192
Query: 546 TF------QQMQADNVKPTEATMVSLLSACAHLG 629
F Q+ ++PT TM ++++ACA +G
Sbjct: 193 MFHLLMRTQREGEQRLRPTNGTMATVVAACAQVG 226
Score = 67.8 bits (164), Expect = 3e-09
Identities = 63/228 (27%), Positives = 90/228 (39%), Gaps = 59/228 (25%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFN---EMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTP 293
++ Y + G+L A VF VV+ NA+I G + AR+LFD M P
Sbjct: 110 MVTCYCRAGDLTSARDVFEASLRAMSSSVVSWNAMIDGYCKAGRMDAARELFDRMGSSLP 169
Query: 294 S--SWNTMMTCYCKSGDIEAARLIFDL--------------------------------- 368
+WNTMM Y + GD +A +F L
Sbjct: 170 DVITWNTMMAGYLRGGDPASAIAMFHLLMRTQREGEQRLRPTNGTMATVVAACAQVGNLA 229
Query: 369 ------NPIKNAVSW------NAMIDGYCKSNQLMLARELFDCAGALK--NVVTWNTMIS 506
+ I+ W NA++D Y KS + A ++F + N+ WNT+IS
Sbjct: 230 LGRQIHHLIQQKGIWIDTVLSNALMDMYFKSGSVDCALDVFRAMPRPRSPNLFCWNTVIS 289
Query: 507 GYVQYREFGRAISTFQQM-------QADNVKPTEATMVSLLSACAHLG 629
G AI+ F M ++VKP T V+LLSAC+H G
Sbjct: 290 GLGMNGHGEDAIAAFHDMVEGRGRLNGNSVKPDGVTFVALLSACSHSG 337
>gb|EXC35167.1| hypothetical protein L484_022720 [Morus notabilis]
Length = 642
Score = 185 bits (469), Expect = 1e-44
Identities = 89/210 (42%), Positives = 143/210 (68%), Gaps = 1/210 (0%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
FTF +++ ACAG+ + + GG H ++V+ GF SD+F++ L++ Y+ G +G A +VF+E
Sbjct: 160 FTFPILVKACAGIVSVREGGKAHSKVVRFGFGSDLFVRNSLIHMYSVCGSVGDARKVFDE 219
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
MPE D+V+ N++I NG + ARKLF+ M +R SWNT++ Y + G++EAA+L+F
Sbjct: 220 MPELDLVSWNSMIHGYVKNGEVDVARKLFEVMPKRDAFSWNTLVMGYVEKGNMEAAKLLF 279
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
D+ P K+ VSWN MIDGY ++ + A E F+ L+N+V+WNTM++ YV+ +++ +
Sbjct: 280 DIIPDKDVVSWNCMIDGYARTGNVSAACEFFN-GMPLRNIVSWNTMLALYVRSKDYSECL 338
Query: 543 STFQQM-QADNVKPTEATMVSLLSACAHLG 629
F +M +A KP EAT+VS+L+A A+ G
Sbjct: 339 RLFDKMLEAGETKPNEATLVSVLTASANFG 368
Score = 82.8 bits (203), Expect = 8e-14
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 40/216 (18%)
Frame = +3
Query: 102 DMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDEMS 281
D F L+ Y + G + A+ +F+ +P++DVV+ N +I G +S A + F+ M
Sbjct: 255 DAFSWNTLVMGYVEKGNMEAAKLLFDIIPDKDVVSWNCMIDGYARTGNVSAACEFFNGMP 314
Query: 282 ERTPSSWNTMMTCYCKSGDIEAARLIFD------------------LNPIKN-----AVS 392
R SWNTM+ Y +S D +FD L N A
Sbjct: 315 LRNIVSWNTMLALYVRSKDYSECLRLFDKMLEAGETKPNEATLVSVLTASANFGRLDAGK 374
Query: 393 W-----------------NAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQY 521
W A++ Y K + +AR +FD ++VV+WN+MI GY +
Sbjct: 375 WVHSYIESKMIKPDVLLSTALLSMYAKCGDMDMARSVFD-EMTERSVVSWNSMIMGYGMH 433
Query: 522 REFGRAISTFQQMQADNVKPTEATMVSLLSACAHLG 629
+A+ F +M+ P +AT V +LSAC H G
Sbjct: 434 GNGEKALEIFLKMEKRGPVPNDATFVCVLSACTHSG 469
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/105 (35%), Positives = 53/105 (50%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
T VL A A G +H I + D+ L T LL+ YAK G++ A VF+EM
Sbjct: 356 TLVSVLTASANFGRLDAGKWVHSYIESKMIKPDVLLSTALLSMYAKCGDMDMARSVFDEM 415
Query: 186 PERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTC 320
ER VV+ N++I GM+G A ++F +M +R P + C
Sbjct: 416 TERSVVSWNSMIMGYGMHGNGEKALEIFLKMEKRGPVPNDATFVC 460
>ref|XP_003564095.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 483
Score = 185 bits (469), Expect = 1e-44
Identities = 95/209 (45%), Positives = 142/209 (67%), Gaps = 8/209 (3%)
Frame = +3
Query: 27 ACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVA 206
AC G + A+HC + K+G SD+ + T LL Y K G L A+++F+EM RD +A
Sbjct: 19 ACPGCREEQ---ALHCLVCKLGHASDVVMATALLTCYGKRGLLALAQRLFDEMTRRDSIA 75
Query: 207 QNALIAALGMNGYLSDARKLFDEM--SERTPSSWNTMMTCYCKSGDIEAARLIFDLN--- 371
NA++AALG +G +DAR+LFD M ++RTP+SWNT++TCYC++GD+ +AR +FD +
Sbjct: 76 FNAMLAALGASGRTADARRLFDRMPDADRTPASWNTVLTCYCRAGDLASAREVFDASLRA 135
Query: 372 PIKNAVSWNAMIDGYCKSNQLMLARELFD--CAGALKNVVTWNTMISGYVQYREFGRAIS 545
+ VSWNAMIDGYCK+ ++ A+ELFD + ++VVTWNTM++GY++ + AI+
Sbjct: 136 TTSSLVSWNAMIDGYCKAGRMDAAQELFDRMTGSSPRDVVTWNTMMAGYLRRGDPAAAIA 195
Query: 546 TFQQ-MQADNVKPTEATMVSLLSACAHLG 629
F++ MQ ++PT TM + +SACA G
Sbjct: 196 MFRRLMQQQTLRPTTVTMATAVSACAQAG 224
Score = 76.6 bits (187), Expect = 5e-12
Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 47/216 (21%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFN---EMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTP 293
+L Y + G+L A +VF+ +V+ NA+I G + A++LFD M+ +P
Sbjct: 112 VLTCYCRAGDLASAREVFDASLRATTSSLVSWNAMIDGYCKAGRMDAAQELFDRMTGSSP 171
Query: 294 S---SWNTMMTCYCKSGDIEAARLIFD--------------------------------- 365
+WNTMM Y + GD AA +F
Sbjct: 172 RDVVTWNTMMAGYLRRGDPAAAIAMFRRLMQQQTLRPTTVTMATAVSACAQAGDLALGRE 231
Query: 366 -------LNPIKNAVSWNAMIDGYCKSNQLMLARELF-DCAGALKNVVTWNTMISGYVQY 521
L +AV NA+ID Y K + A E+F G N+ WNT+I+G +
Sbjct: 232 IHLSIRRLGTTADAVLSNALIDMYFKCGSVDRALEVFVTMPGGAPNLFCWNTLIAGLGRN 291
Query: 522 REFGRAISTFQQMQADNVKPTEATMVSLLSACAHLG 629
A+ F+ M VKP T V++LSAC+H G
Sbjct: 292 SRGEDAVRAFRDMVEKVVKPDAVTFVAVLSACSHSG 327
>ref|NP_001057146.1| Os06g0216400 [Oryza sativa Japonica Group]
gi|51090406|dbj|BAD35328.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|51091140|dbj|BAD35836.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113595186|dbj|BAF19060.1|
Os06g0216400 [Oryza sativa Japonica Group]
gi|215715231|dbj|BAG94982.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222635200|gb|EEE65332.1| hypothetical protein
OsJ_20596 [Oryza sativa Japonica Group]
Length = 474
Score = 182 bits (461), Expect = 9e-44
Identities = 91/204 (44%), Positives = 133/204 (65%), Gaps = 15/204 (7%)
Frame = +3
Query: 63 AIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNG 242
A+HC K+G D L T LL YA+ G L PA ++F+EMP RD VA NA++AAL +
Sbjct: 28 ALHCLACKLGLAGDAVLATALLTRYARRGLLDPARRLFDEMPRRDAVAFNAMLAALVASR 87
Query: 243 YLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIFDLN---PIKNAVSWNAMIDG 413
++DAR+LF+ M +RTP+SWNTM+TCYCK+GD+ +AR +F+ + N VSWN MIDG
Sbjct: 88 RMADARELFERMPDRTPASWNTMVTCYCKAGDLGSAREVFEASLGATASNVVSWNTMIDG 147
Query: 414 YCKSNQLMLARELFDCAGA------LKNVVTWNTMISGYVQYREFGRAISTFQQMQADNV 575
YCK+ ++ A+ELFDC G +VVTWNTM++GY++ + AI+ F+++ V
Sbjct: 148 YCKAGRMDAAQELFDCMGCSFSSSPSPDVVTWNTMMAGYLRRGDPATAIAMFRRLMRQTV 207
Query: 576 K------PTEATMVSLLSACAHLG 629
+ PT T+ ++++AC G
Sbjct: 208 QQQTLMMPTTVTIATVVTACTQAG 231
Score = 60.1 bits (144), Expect = 5e-07
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 27/196 (13%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFNEM-------PERDVVAQNALIAALGMNGYLSDARKLFDEMS 281
+++ Y K G + A+++F+ M P DVV N ++A G + A +F +
Sbjct: 144 MIDGYCKAGRMDAAQELFDCMGCSFSSSPSPDVVTWNTMMAGYLRRGDPATAIAMFRRLM 203
Query: 282 ERTPSSWNTMM----------TCYCKSGDIEAARLIF----DLNPIKNAVSWNAMIDGYC 419
+T MM T ++GD R + L +AV NA+ID Y
Sbjct: 204 RQTVQQQTLMMPTTVTIATVVTACTQAGDFAFGRRVHHYIRQLGTRIDAVLSNALIDMYF 263
Query: 420 KSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAISTFQQMQADN------VKP 581
K + A ++F N+ WNT+I+G A+ F M + ++P
Sbjct: 264 KCGSVDRALDVFATMPDGPNLFCWNTVIAGLGMNGRGEDAVRAFHDMVGRSRTCRGIIRP 323
Query: 582 TEATMVSLLSACAHLG 629
T V+LLSAC+H G
Sbjct: 324 DGVTFVALLSACSHSG 339
>gb|EEC80230.1| hypothetical protein OsI_22164 [Oryza sativa Indica Group]
Length = 457
Score = 181 bits (459), Expect = 2e-43
Identities = 90/204 (44%), Positives = 133/204 (65%), Gaps = 15/204 (7%)
Frame = +3
Query: 63 AIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNG 242
A+HC K+G D L T LL YA+ G L PA ++F+EMP RD VA NA++AAL +
Sbjct: 28 ALHCLACKLGLAGDAVLATALLTRYARRGLLDPARRLFDEMPRRDAVAFNAMLAALVASR 87
Query: 243 YLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIFDLN---PIKNAVSWNAMIDG 413
++DAR+LF+ M +RTP+SWNTM+TCYCK+GD+ +AR +F+ + N VSWN MIDG
Sbjct: 88 RMADARELFERMPDRTPASWNTMVTCYCKAGDLGSAREVFEASLGATASNVVSWNTMIDG 147
Query: 414 YCKSNQLMLARELFDCAGA------LKNVVTWNTMISGYVQYREFGRAISTFQQMQADNV 575
YCK+ ++ A+ELFDC G +VVTWNTM++GY++ + A++ F+++ V
Sbjct: 148 YCKAGRMDAAQELFDCMGCSFSSSPSPDVVTWNTMMAGYLRRGDPATALAMFRRLMRQTV 207
Query: 576 K------PTEATMVSLLSACAHLG 629
+ PT T+ ++++AC G
Sbjct: 208 QQQTLMMPTTVTIATVVTACTQAG 231
>dbj|BAK02250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 180 bits (456), Expect = 4e-43
Identities = 94/214 (43%), Positives = 139/214 (64%), Gaps = 10/214 (4%)
Frame = +3
Query: 18 VLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERD 197
VL A + A+HC + K+G SD+ L T LL Y K G L PA+++F+EMP RD
Sbjct: 14 VLRAVTACRGRREEQALHCLVCKLGLASDVVLATALLARYGKRGLLSPAQRLFDEMPRRD 73
Query: 198 VVAQNALIAALGMNGYLSDARKLFDEMSE--RTPSSWNTMMTCYCKSGDIEAARLIFDLN 371
VA NA++AALG +G +DAR+LFD M E RTP+SWNTM+TCYC++GD+ +AR +F+ +
Sbjct: 74 PVAFNAMLAALGASGSAADARRLFDGMPEPDRTPASWNTMLTCYCRAGDLASARAVFEAS 133
Query: 372 ---PIKNAVSWNAMIDGYCKSNQLMLARELFDCAG-ALKNVVTWNTMISGYVQYREFGRA 539
+ + VSWNAMI GYC + ++ ARELFD G +L++ VT+NTM++GY++ +
Sbjct: 134 LRARMSSVVSWNAMIHGYCNAGRMDAARELFDRMGSSLRDAVTYNTMMAGYLRRGDPAAT 193
Query: 540 ISTFQ----QMQADNVKPTEATMVSLLSACAHLG 629
I+ F+ Q +PT T+ ++++AC G
Sbjct: 194 IAMFRRLTHQQDQQTPRPTAVTIATVVTACTQAG 227
>ref|NP_001141635.2| hypothetical protein [Zea mays] gi|238908843|gb|ACF86758.2| unknown
[Zea mays] gi|413952668|gb|AFW85317.1| hypothetical
protein ZEAMMB73_813992 [Zea mays]
Length = 504
Score = 176 bits (447), Expect = 4e-42
Identities = 90/185 (48%), Positives = 129/185 (69%), Gaps = 10/185 (5%)
Frame = +3
Query: 105 MFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDEMSE 284
M + T LL YAK G + PA+++F+EMP RDVVA NA++AALG G ++DA LF MS+
Sbjct: 1 MVISTALLTSYAKRGLVAPAQRLFDEMPRRDVVATNAMLAALGAAGRVTDAGALFGRMSD 60
Query: 285 RTPSSWNTMMTCYCKSGDIEAARLIFDLN---PIKNAVSWNAMIDGYCKSNQLMLARELF 455
RTP+SWNTM+TCYC++GD+ AAR +F+ + + VSWNAMIDGYC++ ++ ARELF
Sbjct: 61 RTPASWNTMVTCYCRAGDLAAARDVFEASLRAASSSVVSWNAMIDGYCRAGRMDAARELF 120
Query: 456 DCAG-ALKNVVTWNTMISGYVQYREFGRAISTF------QQMQADNVKPTEATMVSLLSA 614
D G +L +VVTWNTM++G+++ + AIS F Q+ ++PT TM + ++A
Sbjct: 121 DRMGSSLPDVVTWNTMMAGHLRRGDPASAISMFHLLMRRQREGEQRLRPTNGTMATAVTA 180
Query: 615 CAHLG 629
CA +G
Sbjct: 181 CARVG 185
Score = 68.9 bits (167), Expect = 1e-09
Identities = 59/227 (25%), Positives = 89/227 (39%), Gaps = 58/227 (25%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFN---EMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTP 293
++ Y + G+L A VF VV+ NA+I G + AR+LFD M P
Sbjct: 69 MVTCYCRAGDLAAARDVFEASLRAASSSVVSWNAMIDGYCRAGRMDAARELFDRMGSSLP 128
Query: 294 S--SWNTMMTCYCKSGDIEAARLIFDL--------------------------------- 368
+WNTMM + + GD +A +F L
Sbjct: 129 DVVTWNTMMAGHLRRGDPASAISMFHLLMRRQREGEQRLRPTNGTMATAVTACARVGDLA 188
Query: 369 ------NPIKNAVSW------NAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGY 512
+ ++ A W NA++D Y K+ + A ++F N+ WNT+ISG
Sbjct: 189 LGRQIHHLVQQAGIWMDAVLSNALMDMYFKTGSVGCALDVFRAMPCSPNLFCWNTVISGL 248
Query: 513 VQYREFGRAISTFQQM--------QADNVKPTEATMVSLLSACAHLG 629
A++ F M +V+P T V+LLSAC+H G
Sbjct: 249 GMNGRGEDAVAAFHDMVEGRGRVKNGSSVRPDGVTFVALLSACSHSG 295
>ref|XP_003521411.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 579
Score = 170 bits (431), Expect = 3e-40
Identities = 88/209 (42%), Positives = 130/209 (62%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
FT+ V+ AC+G + G ++H + G + D+++ T L++ Y K GE+ A +VF+
Sbjct: 142 FTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDG 201
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
M +R+VV+ A++ G + +ARKLFDEM R +SWN+M+ + K GD+ AR +F
Sbjct: 202 MSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVF 261
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
D P KN VS+ MIDGY K+ + AR LFDC+ K+VV W+ +ISGYVQ +A+
Sbjct: 262 DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCS-LEKDVVAWSALISGYVQNGLPNQAL 320
Query: 543 STFQQMQADNVKPTEATMVSLLSACAHLG 629
F +M+ NVKP E +VSL+SA A LG
Sbjct: 321 RVFLEMELMNVKPDEFILVSLMSASAQLG 349
>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 169 bits (429), Expect = 5e-40
Identities = 91/209 (43%), Positives = 131/209 (62%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
FT+ ++ AC+ + K G A H V+ G D+F+ T L++ Y K GE+ A +VF+E
Sbjct: 124 FTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDE 183
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
M ER+VV+ A+IA L +ARKLFDEM E+ SWN +++ Y K GD+ +AR +F
Sbjct: 184 MGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMF 243
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
D P +N VS+ MIDGY KS + AR +F+ A ++VV W+ +ISGYVQ + A+
Sbjct: 244 DEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPE-RDVVAWSALISGYVQNGQPNEAV 302
Query: 543 STFQQMQADNVKPTEATMVSLLSACAHLG 629
F +M + NVKP E MVSL+SAC+ +G
Sbjct: 303 KIFLEMCSRNVKPDEFIMVSLMSACSQMG 331
>gb|EYU37582.1| hypothetical protein MIMGU_mgv1a024354mg, partial [Mimulus
guttatus]
Length = 483
Score = 169 bits (427), Expect = 8e-40
Identities = 84/209 (40%), Positives = 134/209 (64%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
+TF V+ AC+ +SA + G +H V+ G + D+F+ + L++FY K G++G A +VF+
Sbjct: 107 YTFPSVIKACSNVSALEEGRVLHGVTVRCGTDGDVFVGSSLIDFYGKCGQIGCARKVFDG 166
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
MP R+ V+ A++ G ++ A+ LFDEM +R ++WN M+ KSGD+ +AR +F
Sbjct: 167 MPVRNEVSWTAMMVGYLSFGDMAAAKSLFDEMPKRNTATWNAMIKGLVKSGDLNSARNLF 226
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
D P++N VS+ +IDGY K + AR LFD K++ +W+ ++SGYVQ R+ A+
Sbjct: 227 DEMPVRNEVSFTTLIDGYAKGGDMAAARSLFDQL-THKDLCSWSALMSGYVQNRKACEAV 285
Query: 543 STFQQMQADNVKPTEATMVSLLSACAHLG 629
+F +MQ N+KP E MV+L+SAC+ LG
Sbjct: 286 KSFSEMQDSNLKPDEFIMVNLMSACSQLG 314
>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 604
Score = 165 bits (418), Expect = 9e-39
Identities = 87/211 (41%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGP--AEQVF 176
FT+ +L AC G IHC + K GF D+F+ L++ Y+K G LG A ++F
Sbjct: 122 FTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLF 181
Query: 177 NEMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARL 356
EM E+D+V+ N++I L G L ARKLFDEM+ER SWNT++ Y K+G++ A
Sbjct: 182 MEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFN 241
Query: 357 IFDLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGR 536
+F+ P +N VSW+ M+ GYCK+ + +AR LFD KN+VTW +ISG+ +
Sbjct: 242 LFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFD-KMPFKNLVTWTIIISGFAEKGLAKE 300
Query: 537 AISTFQQMQADNVKPTEATMVSLLSACAHLG 629
A + + QM+A +KP + T++S+L+ACA G
Sbjct: 301 ATTLYNQMEAAGLKPDDGTLISILAACAESG 331
Score = 83.2 bits (204), Expect = 6e-14
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Frame = +3
Query: 96 ESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDE 275
E D +L+ Y K GE+ A +F +MPER+VV+ + +++ G + AR LFD+
Sbjct: 217 ERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDK 276
Query: 276 MSERTPSSWNTMMTCYCKSGDIEAARLIFD------LNP--------------------- 374
M + +W +++ + + G + A +++ L P
Sbjct: 277 MPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLG 336
Query: 375 -----------IKNAVSW-NAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQ 518
IK +V+ NA++D Y K ++ A +F+ +++++V+WN M+ G
Sbjct: 337 KKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFN-EMSMRDLVSWNCMLQGLAM 395
Query: 519 YREFGRAISTFQQMQADNVKPTEATMVSLLSACAHLG 629
+ +AI F +MQ + KP + T++++L AC H G
Sbjct: 396 HGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAG 432
Score = 62.0 bits (149), Expect = 1e-07
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
T +L ACA LG +H I K+ + + + L++ YAK G + A +FNEM
Sbjct: 319 TLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEM 378
Query: 186 PERDVVAQNALIAALGMNGYLSDARKLFDEMSER--TPSSWNTM-MTCYC-KSGDIEAAR 353
RD+V+ N ++ L M+G+ A +LF +M + P + + C C +G ++
Sbjct: 379 SMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGL 438
Query: 354 LIF-----DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMI 503
F D + + + MID + +L A L N V W T++
Sbjct: 439 SYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLL 493
>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product
[Vitis vinifera]
Length = 585
Score = 165 bits (418), Expect = 9e-39
Identities = 82/210 (39%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
+T+ VL AC + GG + + VK GF D+F+ GL++ Y + GE G A VF+
Sbjct: 111 YTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDG 170
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKS-GDIEAARLI 359
E+D+V+ N+++ G + +A+ +FDEM ER SW+ M+ Y K G++ AR+
Sbjct: 171 FSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVF 230
Query: 360 FDLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRA 539
FD P ++ VSWN+MIDGY K ++ +ARE+FD KNV++W+ MI GY Q+R+ A
Sbjct: 231 FDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFD-KMLQKNVISWSIMIDGYAQHRDSKEA 289
Query: 540 ISTFQQMQADNVKPTEATMVSLLSACAHLG 629
++ F+QM +KP ++V +SAC+ LG
Sbjct: 290 LNLFRQMLCQGIKPDRVSVVGAVSACSQLG 319
Score = 66.2 bits (160), Expect = 7e-09
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +3
Query: 27 ACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVA 206
AC+ L A G IH + + D+ +QT L++ Y K G A ++FN MPER+VV+
Sbjct: 314 ACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVS 373
Query: 207 QNALIAALGMNGYLSDARKLFDEMS-ERTP 293
N +I LGMNG+ +A + F +M ER P
Sbjct: 374 WNVMIVGLGMNGFGKEALECFTQMEMERIP 403
>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
gi|557096454|gb|ESQ36962.1| hypothetical protein
EUTSA_v10002407mg [Eutrema salsugineum]
Length = 784
Score = 165 bits (417), Expect = 1e-38
Identities = 92/210 (43%), Positives = 128/210 (60%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
FT V+ C+ L A + G IH K+GF D F+Q+ L++FY+K G L A +VF++
Sbjct: 216 FTLPCVVKGCSRLCAVEEGKQIHGFSTKLGFGFDKFVQSSLVSFYSKCGLLDCARKVFDK 275
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
M E+D+V N+LI +G + ARKLFDE+ R SW ++ + KSG IEAAR +F
Sbjct: 276 MGEKDLVTWNSLIDGYARSGDVETARKLFDEIPRRDSYSWTALLHGFSKSGKIEAARDVF 335
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
D P KN VSWNAMI+GY +S A ELF+ +N++TWN++I+GY Y F A+
Sbjct: 336 DKMPTKNLVSWNAMINGYMRSGDFESACELFNTMPE-RNLITWNSIIAGYEVYGRFEEAL 394
Query: 543 STF----QQMQADNVKPTEATMVSLLSACA 620
S F Q+ + D +KP AT SL+SA A
Sbjct: 395 SMFLRMLQEEEDDFIKPNNATFTSLISAVA 424
Score = 72.8 bits (177), Expect = 8e-11
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 42/218 (19%)
Frame = +3
Query: 102 DMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDEMS 281
D + T LL+ ++K G++ A VF++MP +++V+ NA+I +G A +LF+ M
Sbjct: 311 DSYSWTALLHGFSKSGKIEAARDVFDKMPTKNLVSWNAMINGYMRSGDFESACELFNTMP 370
Query: 282 ERTPSSWNTMMTCYCKSGDIEAARLIF-----------------DLNPIKNAVSWNAMID 410
ER +WN+++ Y G E A +F + +AV+ +A++
Sbjct: 371 ERNLITWNSIIAGYEVYGRFEEALSMFLRMLQEEEDDFIKPNNATFTSLISAVAASAILS 430
Query: 411 ------GYCKSNQLM-------LARELFDCAGALKNVVT------------WNTMISGYV 515
Y N + L E++ G++++ +T WN++I G
Sbjct: 431 TGKWVHSYMVKNGMAIDGVIGTLLIEMYSKCGSIESALTVFTSIHRKKLGHWNSVIVGLG 490
Query: 516 QYREFGRAISTFQQMQADNVKPTEATMVSLLSACAHLG 629
+ A+ F++MQ +KP T V LL+A +H+G
Sbjct: 491 MHGMADEALELFKKMQESGIKPNTVTFVGLLNAFSHVG 528
Score = 61.2 bits (147), Expect = 2e-07
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
TFT ++ A A + G +H +VK G D + T L+ Y+K G + A VF +
Sbjct: 415 TFTSLISAVAASAILSTGKWVHSYMVKNGMAIDGVIGTLLIEMYSKCGSIESALTVFTSI 474
Query: 186 PERDVVAQNALIAALGMNGYLSDARKLFDEMSER----TPSSWNTMMTCYCKSGDIEAAR 353
+ + N++I LGM+G +A +LF +M E ++ ++ + G ++ A
Sbjct: 475 HRKKLGHWNSVIVGLGMHGMADEALELFKKMQESGIKPNTVTFVGLLNAFSHVGYVKEAH 534
Query: 354 LIFDLNPIKNAVS-----WNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISG 509
L FD K + + ++D C++ +L A+ + + N V +++ G
Sbjct: 535 LYFDFMVKKYGIEREIEHYGCLVDVLCRTGRLQEAKTVIEEMKIRPNKVILMSLLRG 591
>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 821
Score = 165 bits (417), Expect = 1e-38
Identities = 88/208 (42%), Positives = 131/208 (62%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
FT V+ ACA L A G +H +K+G +M++Q+ L++ Y+K G + A +VF+E
Sbjct: 255 FTLPSVVKACARLGAVAEGKQVHALALKIGLGLEMYVQSSLVSLYSKCGAIECARKVFDE 314
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
M ERD+VA N+LI G + A +LF+EM ER SW ++ K G ++ AR +F
Sbjct: 315 MRERDLVAWNSLIDGYARCGRVDVAVELFEEMEERDEFSWTVLVDGLSKCGHVKKAREVF 374
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
+ P KN VSWNAMI+GY K + ARELF G+ ++V++WN+MISGY FG A+
Sbjct: 375 ERMPSKNVVSWNAMINGYMKGGEFEKARELFGRMGS-RDVISWNSMISGYEFNGRFGEAL 433
Query: 543 STFQQMQADNVKPTEATMVSLLSACAHL 626
F+++ ++V+PT AT+VS+LSA + L
Sbjct: 434 ELFREVLEEDVRPTPATLVSVLSAVSGL 461
Score = 70.5 bits (171), Expect = 4e-10
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Frame = +3
Query: 96 ESDMFLQTGLLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDE 275
E D F T L++ +K G + A +VF MP ++VV+ NA+I G AR+LF
Sbjct: 348 ERDEFSWTVLVDGLSKCGHVKKAREVFERMPSKNVVSWNAMINGYMKGGEFEKARELFGR 407
Query: 276 MSERTPSSWNTMMTCYCKSGDIEAARLIF------DLNP-------IKNAVSWNA----- 401
M R SWN+M++ Y +G A +F D+ P + +AVS A
Sbjct: 408 MGSRDVISWNSMISGYEFNGRFGEALELFREVLEEDVRPTPATLVSVLSAVSGLAALSKG 467
Query: 402 ---------------------MIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQ 518
+ID Y K + A +F+ K V W +I G
Sbjct: 468 RIVHSVMVKHGFELEGVLGTSLIDMYSKCGSIDSAMAVFEGIQR-KKVGHWTAIIVGLGM 526
Query: 519 YREFGRAISTFQQMQADNVKPTEATMVSLLSACAHLG 629
+ + + F +M+ + ++P T + +L+AC+H G
Sbjct: 527 HGMADQVLQLFLEMRTNGMEPHGITFIGILNACSHAG 563
Score = 64.3 bits (155), Expect = 3e-08
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Frame = +3
Query: 6 TFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNEM 185
T VL A +GL+A G +H +VK GFE + L T L++ Y+K G + A VF +
Sbjct: 450 TLVSVLSAVSGLAALSKGRIVHSVMVKHGFELEGVLGTSLIDMYSKCGSIDSAMAVFEGI 509
Query: 186 PERDVVAQNALIAALGMNGYLSDARKLFDEM----SERTPSSWNTMMTCYCKSGDIEAAR 353
+ V A+I LGM+G +LF EM E ++ ++ +G ++ R
Sbjct: 510 QRKKVGHWTAIIVGLGMHGMADQVLQLFLEMRTNGMEPHGITFIGILNACSHAGLVDLGR 569
Query: 354 LIFDLNPIKNAVS-----WNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISG 509
F++ + + ++D C++ L A+++ N W +++SG
Sbjct: 570 YYFNMMRKDYGIEPTIEHYGCLVDILCRAGCLDEAKDIIGSMPMKPNKFIWMSLLSG 626
>ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316376|gb|EFH46799.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 547
Score = 164 bits (415), Expect = 2e-38
Identities = 82/209 (39%), Positives = 130/209 (62%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGELGPAEQVFNE 182
+TF +V+ C+ + ++G +H ++++GF+ D+ L T ++FY K +L A +VF E
Sbjct: 108 YTFPLVMKVCSNNAEFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGE 167
Query: 183 MPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNTMMTCYCKSGDIEAARLIF 362
MPER+VV+ ALI A +G L +A+++FD M ER +WN ++ KSGD+ AR +F
Sbjct: 168 MPERNVVSWTALIVAYVKSGELEEAKRMFDLMPERNLGTWNALVDGLVKSGDLVNARKLF 227
Query: 363 DLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
D P ++ +S+ +MIDGY K ++ AR+LF+ A + +V W+ +I GY Q + A
Sbjct: 228 DEMPKRDIISYTSMIDGYAKGGDMVSARDLFENARGV-DVRAWSALILGYAQNGQPNEAF 286
Query: 543 STFQQMQADNVKPTEATMVSLLSACAHLG 629
F +M A NVKP E MV L+SAC+ +G
Sbjct: 287 KVFSEMCAKNVKPDEFIMVGLMSACSQMG 315
>gb|EEE66913.1| hypothetical protein OsJ_23761 [Oryza sativa Japonica Group]
Length = 595
Score = 164 bits (415), Expect = 2e-38
Identities = 95/226 (42%), Positives = 131/226 (57%), Gaps = 17/226 (7%)
Frame = +3
Query: 3 FTFTVVLPACAGLSANKLGGAIHCQIVKMGFESDMFLQTGLLNFYAKVGE-----LGPAE 167
FTFT +L ACA L + G +H QIV+ GF SD+F+Q L++ Y + G +G A
Sbjct: 11 FTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGGVGAAR 70
Query: 168 QVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSWNT-----------MM 314
QVF+EM +RDVV+ N+++ +G + A F+ M ER SWNT M+
Sbjct: 71 QVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGNAVSWNLMI 130
Query: 315 TCYCKSGDIEAARLIFDLNPIKNAVSWNAMIDGYCKSNQLMLARELFDCAGALKNVVTWN 494
+ Y SGD+EAAR +FD K+ VSW AM+ Y K L ELFD +KN+V+WN
Sbjct: 131 SGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELFDHM-PVKNLVSWN 189
Query: 495 TMISGYVQYREFGRAISTFQQMQAD-NVKPTEATMVSLLSACAHLG 629
MI+GY + A+ TFQ M + +P EAT+VS++SACA LG
Sbjct: 190 AMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLG 235
Score = 67.8 bits (164), Expect = 3e-09
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 40/209 (19%)
Frame = +3
Query: 123 LLNFYAKVGELGPAEQVFNEMPERDVVAQNALIAALGMNGYLSDARKLFDEMSERTPSSW 302
+++ YA G++ A VF+ M ++DVV+ A+++A G L +LFD M + SW
Sbjct: 129 MISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELFDHMPVKNLVSW 188
Query: 303 NTMMTCYCKSGDIEAARLIFDLNPIKNAV-----------------------SW------ 395
N M+T Y + + A F L ++ +W
Sbjct: 189 NAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIG 248
Query: 396 -----------NAMIDGYCKSNQLMLARELFDCAGALKNVVTWNTMISGYVQYREFGRAI 542
NA+ID + K + A +F + ++TW TMISG+ A+
Sbjct: 249 KSNIHLTVALGNALIDMFAKCGDVGRAESIF-YKMETRCIITWTTMISGFAFNGLCRDAL 307
Query: 543 STFQQMQADNVKPTEATMVSLLSACAHLG 629
+ M + V+ + ++ L+ACAH G
Sbjct: 308 LVYNNMCREGVQLDDTVFIAALAACAHGG 336