BLASTX nr result

ID: Cocculus23_contig00045368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00045368
         (476 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524976.1| Multidrug resistance protein mdtG, putative ...    60   2e-07
ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259...    58   2e-06
ref|XP_002274219.2| PREDICTED: protein ZINC INDUCED FACILITATOR-...    57   2e-06
emb|CBI29168.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002313476.2| transporter-related family protein [Populus ...    55   1e-05

>ref|XP_002524976.1| Multidrug resistance protein mdtG, putative [Ricinus communis]
           gi|223535720|gb|EEF37383.1| Multidrug resistance protein
           mdtG, putative [Ricinus communis]
          Length = 384

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +1

Query: 148 MADAREALLEKVYY*DCPGCKMDQLEKTRGGIPYKEFAFVWVVTVC 285
           M+ + E LL+K YY +CPGCK+DQ+++ R G+P KEF  +W+V +C
Sbjct: 1   MSSSTEPLLKKNYYENCPGCKVDQIKELRTGLPIKEFVSIWIVVLC 46


>ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
          Length = 1624

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
 Frame = +1

Query: 58   YSRVKDQIQTLFSGLV--KVFR---DCAAVYCSVQMADAREALLEKVYY*DCPGCKMDQL 222
            + + +DQ+  + +  V  K+F    D   VY  ++  + RE LL+KVY+  CPGC+++ L
Sbjct: 1106 FVKSEDQLTDILTKAVSSKIFHHSLDNYFVYREME-EEQREVLLKKVYHEGCPGCRVEHL 1164

Query: 223  EKTRGGIPYKEFAFVWVVTVCN 288
            + T+ G+P ++  FVW+V +CN
Sbjct: 1165 KDTQRGLPVRQLFFVWIVVLCN 1186


>ref|XP_002274219.2| PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Vitis
           vinifera]
          Length = 384

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/45 (46%), Positives = 34/45 (75%)
 Frame = +1

Query: 154 DAREALLEKVYY*DCPGCKMDQLEKTRGGIPYKEFAFVWVVTVCN 288
           + RE LL+KVY+  CPGC+++ L+ T+ G+P ++  FVW+V +CN
Sbjct: 4   EQREVLLKKVYHGGCPGCRVEHLKDTQRGLPVRQLFFVWIVVLCN 48


>emb|CBI29168.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/45 (46%), Positives = 34/45 (75%)
 Frame = +1

Query: 154 DAREALLEKVYY*DCPGCKMDQLEKTRGGIPYKEFAFVWVVTVCN 288
           + RE LL+KVY+  CPGC+++ L+ T+ G+P ++  FVW+V +CN
Sbjct: 36  EQREVLLKKVYHEGCPGCRVEHLKDTQRGLPVRQLFFVWIVVLCN 80


>ref|XP_002313476.2| transporter-related family protein [Populus trichocarpa]
           gi|550330900|gb|EEE87431.2| transporter-related family
           protein [Populus trichocarpa]
          Length = 498

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/44 (47%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
 Frame = +1

Query: 160 REALLE--KVYY*DCPGCKMDQLEKTRGGIPYKEFAFVWVVTVC 285
           R ALLE  K YY +CPGCK+D+L + + G+PY+  +++W+V++C
Sbjct: 7   RNALLETTKEYYENCPGCKIDRLNEEQRGVPYRNLSYIWIVSLC 50