BLASTX nr result
ID: Cocculus23_contig00045366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00045366
(415 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, part... 56 8e-12
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part... 72 8e-11
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun... 69 7e-10
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 40 3e-09
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 40 4e-09
gb|ABD63147.1| Integrase core domain containing protein [Asparag... 48 4e-09
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part... 65 7e-09
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 46 1e-08
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 41 7e-08
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 41 9e-08
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 41 1e-07
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-... 41 1e-07
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 41 1e-07
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 41 1e-07
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 40 2e-07
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 40 2e-07
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 40 2e-07
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 40 2e-07
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 40 3e-07
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 40 3e-07
>ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, partial [Prunus persica]
gi|462422461|gb|EMJ26724.1| hypothetical protein
PRUPE_ppa026504mg, partial [Prunus persica]
Length = 750
Score = 56.2 bits (134), Expect(2) = 8e-12
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 14/61 (22%)
Frame = -2
Query: 321 KSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLIF--------------PANFPKV 184
+SL Y+Q+ +N IH ST+KSPF+VC ++P SPFDL F P NF +V
Sbjct: 632 ESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQSPFDLAFTMSDQPARHDKHRVPCNFKEV 691
Query: 183 V 181
+
Sbjct: 692 I 692
Score = 39.3 bits (90), Expect(2) = 8e-12
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTIL*LLFGYN*Q*PWNYDE 320
HPQT+ Q +VVNRT++ LL+GYN + P +DE
Sbjct: 601 HPQTDGQTEVVNRTMVHLLWGYNSKHPRTWDE 632
>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
gi|462421192|gb|EMJ25455.1| hypothetical protein
PRUPE_ppa018408mg, partial [Prunus persica]
Length = 1440
Score = 72.0 bits (175), Expect = 8e-11
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTIL*LLFGYN*Q*PWNYDEK----SFLHSILL*WNNSQFYHKISI*G 248
HPQT+ Q +VVNRT++ LL GYN + P +DE F + + + + ++ + G
Sbjct: 1195 HPQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCL-G 1253
Query: 247 VL*FYSRXXXXXXXXXXXSQGCEKMEGVNAIMFILRIHHIHHKVCENLEKVQ*KYKERHD 68
L S G E+ E + A F+ R+ IH +V L++ Q +YK RHD
Sbjct: 1254 YLP-QSPFDLAFTMSDQPLSGKEEEEHIRAKKFLERVRKIHIEVEAQLKRSQQRYKARHD 1312
Query: 67 KHHTQHNFQVGDLLWWHIMK 8
KHH NF+ GDL+W H+ K
Sbjct: 1313 KHHVPCNFKEGDLVWLHLGK 1332
>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
gi|462415599|gb|EMJ20336.1| hypothetical protein
PRUPE_ppa015965mg [Prunus persica]
Length = 1484
Score = 68.9 bits (167), Expect = 7e-10
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTIL*LLFGYN*Q*PWNYDEK----SFLHSILL*WNNSQFYHKISI*G 248
HPQT+ Q +VVNRT++ LL GYN + P +DE F + + + + ++ + G
Sbjct: 1229 HPQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCL-G 1287
Query: 247 VL*FYSRXXXXXXXXXXXSQGCEKMEGVNAIMFILRIHHIHHKVCENLEKVQ*KYKERHD 68
L S G E+ E + A F+ R+ IH +V L++ Q +YK RHD
Sbjct: 1288 YLP-QSPFDLAFTMSDQPLSGKEEEEHIRAKKFLERVRKIHIEVEAQLKRSQQRYKARHD 1346
Query: 67 KHHTQHNFQVGDLLWWHIMK 8
KH NF+ GDL+W H+ K
Sbjct: 1347 KHRVPCNFKEGDLVWLHLGK 1366
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 40.4 bits (93), Expect(3) = 3e-09
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1428 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1468
Score = 37.4 bits (85), Expect(3) = 3e-09
Identities = 13/48 (27%), Positives = 30/48 (62%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ N ++HS+T PF++ Y +P +P DL+
Sbjct: 1359 VLKKNIKMWEECLPHIEFACNRSLHSTTKMCPFQIVYSLLPRAPIDLM 1406
Score = 28.1 bits (61), Expect(3) = 3e-09
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTI 371
HPQT+ QI+VVNRT+
Sbjct: 1338 HPQTDGQIEVVNRTL 1352
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 39.7 bits (91), Expect(3) = 4e-09
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1383 VLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1430
Score = 39.7 bits (91), Expect(3) = 4e-09
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ +YK DK + NF+ GDL+W H+ K
Sbjct: 1452 LHETTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRK 1492
Score = 26.2 bits (56), Expect(3) = 4e-09
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTI 371
HPQT+ Q +VVNRT+
Sbjct: 1362 HPQTDGQTEVVNRTL 1376
>gb|ABD63147.1| Integrase core domain containing protein [Asparagus officinalis]
Length = 870
Score = 47.8 bits (112), Expect(2) = 4e-09
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = -1
Query: 187 GCEKMEGVNAIMFILRIHHIHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
G E E A F+ +I HIH V L+K Q KYK +HD+H NF GD++W + K
Sbjct: 639 GKEGNERQRAQQFLEKIAHIHASVEAQLKKSQAKYKVKHDQHRVPCNFGKGDMVWLKLGK 698
Score = 38.5 bits (88), Expect(2) = 4e-09
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -2
Query: 303 QYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLIF 205
++ +N I+ S+ KSPF+ CY F+P + FD++F
Sbjct: 599 EFTFNRAIYGSSGKSPFETCYGFLPLNLFDIVF 631
>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
gi|462398849|gb|EMJ04517.1| hypothetical protein
PRUPE_ppa019964mg, partial [Prunus persica]
Length = 1488
Score = 65.5 bits (158), Expect = 7e-09
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTIL*LLFGYN*Q*PWNYDEK----SFLHSILL*WNNSQFYHKISI*G 248
H QT+ Q +VVNRT++ LL GYN + P +DE F + + + + ++ + G
Sbjct: 1231 HLQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCL-G 1289
Query: 247 VL*FYSRXXXXXXXXXXXSQGCEKMEGVNAIMFILRIHHIHHKVCENLEKVQ*KYKERHD 68
L S G E+ E + A F+ RI IH +V L++ Q +YK RHD
Sbjct: 1290 YLP-QSPFDLAFTMSDQPLSGKEEEEHIRAKKFLERIRKIHIEVEAQLKRSQQRYKARHD 1348
Query: 67 KHHTQHNFQVGDLLWWHIMK 8
KH NF+ GDL+W H+ K
Sbjct: 1349 KHRVPCNFKEGDLVWLHLGK 1368
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 45.8 bits (107), Expect(3) = 1e-08
Identities = 16/48 (33%), Positives = 33/48 (68%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ N++ + + L +I++ YN ++HS+T PF++ Y F+P +P DL+
Sbjct: 1439 VLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLL 1486
Score = 33.1 bits (74), Expect(3) = 1e-08
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ +YK DK F GDL+W H+ K
Sbjct: 1508 MHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRK 1548
Score = 24.6 bits (52), Expect(3) = 1e-08
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTI 371
HPQT+ Q +VVNR++
Sbjct: 1418 HPQTDGQTEVVNRSL 1432
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 40.8 bits (94), Expect(3) = 7e-08
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L ++++ YN + HS+T K PF++ Y +P +P DL+
Sbjct: 1304 VLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLL 1351
Score = 33.9 bits (76), Expect(3) = 7e-08
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK K F+ GDL+W H+ K
Sbjct: 1373 LHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRK 1413
Score = 26.6 bits (57), Expect(3) = 7e-08
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTI 371
HPQT+ Q +VVNRT+
Sbjct: 1283 HPQTDGQTEVVNRTV 1297
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 40.8 bits (94), Expect(3) = 9e-08
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L ++++ YN + HS+T K PF++ Y +P +P DL+
Sbjct: 1408 VLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLL 1455
Score = 33.9 bits (76), Expect(3) = 9e-08
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK K F+ GDL+W H+ K
Sbjct: 1477 LHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRK 1517
Score = 26.2 bits (56), Expect(3) = 9e-08
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 415 HPQTNDQIKVVNRTI 371
HPQT+ Q +VVNRT+
Sbjct: 1387 HPQTDGQTEVVNRTL 1401
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
I+ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1048 ILKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1095
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1117 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1157
>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1238
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
I+ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1026 ILKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1073
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1095 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1135
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
I+ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 599 ILKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 646
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 668 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 708
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
I+ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 568 ILKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 615
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 637 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 677
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1035 VLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1082
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1104 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1144
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1329 VLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1376
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1398 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1438
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1118 VLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1165
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1187 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1227
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1118 VLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1165
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GDL+W H+ K
Sbjct: 1187 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRK 1227
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1499 VLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1546
Score = 39.7 bits (91), Expect(2) = 3e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GD++W H+ K
Sbjct: 1568 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRK 1608
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = -2
Query: 351 IISNDLGIMMKSLSYIQYCYNGTIHSSTIKSPFKVCYDFIPDSPFDLI 208
++ ++ + + L +I++ YN ++HS+T PF++ Y +P +P DL+
Sbjct: 1490 VLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1537
Score = 39.7 bits (91), Expect(2) = 3e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 130 IHHKVCENLEKVQ*KYKERHDKHHTQHNFQVGDLLWWHIMK 8
+H EN+E++ KYK DK + NF+ GD++W H+ K
Sbjct: 1559 LHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRK 1599