BLASTX nr result
ID: Cocculus23_contig00045313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00045313
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU46528.1| hypothetical protein MIMGU_mgv1a023600mg [Mimulus... 138 9e-31
ref|XP_002520950.1| pentatricopeptide repeat-containing protein,... 137 2e-30
ref|XP_002306801.2| pentatricopeptide repeat-containing family p... 137 2e-30
gb|EXB26546.1| hypothetical protein L484_012535 [Morus notabilis] 134 1e-29
ref|XP_006653508.1| PREDICTED: pentatricopeptide repeat-containi... 131 8e-29
ref|XP_007050470.1| Tetratricopeptide repeat-like superfamily pr... 131 8e-29
ref|XP_004290638.1| PREDICTED: pentatricopeptide repeat-containi... 131 1e-28
gb|EMT10574.1| hypothetical protein F775_16580 [Aegilops tauschii] 130 2e-28
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera] 130 2e-28
gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays] 127 1e-27
ref|XP_004975912.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_007200144.1| hypothetical protein PRUPE_ppa016963mg [Prun... 127 2e-27
gb|ADE76509.1| unknown [Picea sitchensis] 127 2e-27
ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [S... 127 2e-27
gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japo... 127 2e-27
ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group] g... 127 2e-27
emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group] g... 127 2e-27
ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
ref|XP_007203303.1| hypothetical protein PRUPE_ppa025850mg, part... 124 1e-26
>gb|EYU46528.1| hypothetical protein MIMGU_mgv1a023600mg [Mimulus guttatus]
Length = 831
Score = 138 bits (347), Expect = 9e-31
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
KML+GHSERLA+AYGL+ T PIR+TKNLRVCGDCHTFTKL+SKF+EREIVVRDANRF
Sbjct: 758 KMLHGHSERLALAYGLLTTPHRTPIRVTKNLRVCGDCHTFTKLLSKFYEREIVVRDANRF 817
Query: 184 HHFKDGRCTCGDFW 225
HHF+DG C+CGDFW
Sbjct: 818 HHFRDGVCSCGDFW 831
>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 137 bits (345), Expect = 2e-30
Identities = 58/74 (78%), Positives = 68/74 (91%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+MLYGHSERLAIAYGL+ T+ G PIR+TKNLRVCGDCH+F LVS+FFERE++VRDA+RF
Sbjct: 762 QMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRF 821
Query: 184 HHFKDGRCTCGDFW 225
HHFKDG C+CGDFW
Sbjct: 822 HHFKDGMCSCGDFW 835
>ref|XP_002306801.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550339617|gb|EEE93797.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 818
Score = 137 bits (344), Expect = 2e-30
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+MLYGHSERLAIAYGL+ TS G PIRITKNLRVC DCHTF KLVSKFFERE++VRDA+RF
Sbjct: 745 QMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRF 804
Query: 184 HHFKDGRCTCGDFW 225
HHF+DG C+CGDFW
Sbjct: 805 HHFEDGVCSCGDFW 818
>gb|EXB26546.1| hypothetical protein L484_012535 [Morus notabilis]
Length = 932
Score = 134 bits (338), Expect = 1e-29
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+ML+GHSERLAIAYGL+ TS G PIRITKNLRVCGDCHTF KLVSK FER++VVRDANRF
Sbjct: 859 EMLHGHSERLAIAYGLLETSDGAPIRITKNLRVCGDCHTFCKLVSKCFERQLVVRDANRF 918
Query: 184 HHFKDGRCTCGDFW 225
H+FK+G C+CGDFW
Sbjct: 919 HYFKNGLCSCGDFW 932
>ref|XP_006653508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Oryza brachyantha]
Length = 939
Score = 131 bits (330), Expect = 8e-29
Identities = 59/73 (80%), Positives = 64/73 (87%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
+L+GHSERLAIA+GLI TS G P+RI KNLRVCGDCH FTKLVSK FEREIVVRDANRFH
Sbjct: 867 LLHGHSERLAIAFGLISTSSGSPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFH 926
Query: 187 HFKDGRCTCGDFW 225
HF G C+CGDFW
Sbjct: 927 HFSGGSCSCGDFW 939
>ref|XP_007050470.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508702731|gb|EOX94627.1| Tetratricopeptide repeat-like
superfamily protein [Theobroma cacao]
Length = 966
Score = 131 bits (330), Expect = 8e-29
Identities = 58/73 (79%), Positives = 65/73 (89%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
MLYGHSERLAIAYGL+ T+ G PIRITKNLR+CGDCHTF KLVS+ F RE+VVRDANRFH
Sbjct: 894 MLYGHSERLAIAYGLLRTAEGTPIRITKNLRICGDCHTFCKLVSELFGRELVVRDANRFH 953
Query: 187 HFKDGRCTCGDFW 225
HF+ G C+CGDFW
Sbjct: 954 HFEGGVCSCGDFW 966
>ref|XP_004290638.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Fragaria vesca subsp. vesca]
Length = 835
Score = 131 bits (329), Expect = 1e-28
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+MLYGHSERLAIAYGL+ G PIRITKNLRVC DCHTFTKL+SK F R +VVRDANRF
Sbjct: 762 QMLYGHSERLAIAYGLLNIPEGTPIRITKNLRVCMDCHTFTKLISKVFRRVLVVRDANRF 821
Query: 184 HHFKDGRCTCGDFW 225
HHFKDG C+CGDFW
Sbjct: 822 HHFKDGICSCGDFW 835
>gb|EMT10574.1| hypothetical protein F775_16580 [Aegilops tauschii]
Length = 942
Score = 130 bits (327), Expect = 2e-28
Identities = 58/73 (79%), Positives = 64/73 (87%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
+L+ HSERLAIA+GLI T PG P+RI KNLRVCGDCH FTKLVSK FEREIVVRDANRFH
Sbjct: 870 VLHMHSERLAIAFGLISTRPGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFH 929
Query: 187 HFKDGRCTCGDFW 225
HF+ G C+CGDFW
Sbjct: 930 HFRGGSCSCGDFW 942
>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Vitis vinifera]
Length = 993
Score = 130 bits (326), Expect = 2e-28
Identities = 56/74 (75%), Positives = 64/74 (86%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+MLYGHSERLAIAYG++ T G +RITKNLRVCGDCH F KL+SKFFERE+V+RDANRF
Sbjct: 920 QMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRF 979
Query: 184 HHFKDGRCTCGDFW 225
HHFK G C+CGD W
Sbjct: 980 HHFKGGVCSCGDVW 993
>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 130 bits (326), Expect = 2e-28
Identities = 56/74 (75%), Positives = 64/74 (86%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+MLYGHSERLAIAYG++ T G +RITKNLRVCGDCH F KL+SKFFERE+V+RDANRF
Sbjct: 884 QMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRF 943
Query: 184 HHFKDGRCTCGDFW 225
HHFK G C+CGD W
Sbjct: 944 HHFKGGVCSCGDVW 957
>gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 127 bits (320), Expect = 1e-27
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
ML+ HSER+AIA+GLI T PG+PIRI KNLRVCGDCH FTKLVSK FER+IVVRDANRFH
Sbjct: 869 MLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFH 928
Query: 187 HFKDGRCTCGDFW 225
HF G C+C DFW
Sbjct: 929 HFSGGSCSCEDFW 941
>ref|XP_004975912.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Setaria italica]
Length = 953
Score = 127 bits (319), Expect = 2e-27
Identities = 57/73 (78%), Positives = 62/73 (84%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
ML+ HSERLAIA+GLI T G P+RI KNLRVCGDCH FTKLVSK FER+IVVRDANRFH
Sbjct: 881 MLHKHSERLAIAFGLISTHSGTPLRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFH 940
Query: 187 HFKDGRCTCGDFW 225
HF G C+CGDFW
Sbjct: 941 HFSGGACSCGDFW 953
>ref|XP_007200144.1| hypothetical protein PRUPE_ppa016963mg [Prunus persica]
gi|462395544|gb|EMJ01343.1| hypothetical protein
PRUPE_ppa016963mg [Prunus persica]
Length = 818
Score = 127 bits (319), Expect = 2e-27
Identities = 57/74 (77%), Positives = 63/74 (85%)
Frame = +1
Query: 4 KMLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRF 183
+MLYGHSERLAIAYGL+ G PIRITKNLRVCGDCH F KLVSK F + +VVRDANRF
Sbjct: 745 QMLYGHSERLAIAYGLLKPPEGTPIRITKNLRVCGDCHHFIKLVSKVFRQVLVVRDANRF 804
Query: 184 HHFKDGRCTCGDFW 225
HHF+DG C+CGDFW
Sbjct: 805 HHFEDGICSCGDFW 818
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 127 bits (319), Expect = 2e-27
Identities = 54/72 (75%), Positives = 63/72 (87%)
Frame = +1
Query: 10 LYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFHH 189
LY HSE+LAIA+GLI T PG+P+RI KNLRVCGDCHT TK +SK EREI++RDANRFHH
Sbjct: 175 LYHHSEKLAIAFGLISTLPGLPVRIIKNLRVCGDCHTATKFISKIVEREIIIRDANRFHH 234
Query: 190 FKDGRCTCGDFW 225
FKDG C+CGD+W
Sbjct: 235 FKDGLCSCGDYW 246
>ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
gi|241939190|gb|EES12335.1| hypothetical protein
SORBIDRAFT_06g019570 [Sorghum bicolor]
Length = 458
Score = 127 bits (318), Expect = 2e-27
Identities = 58/73 (79%), Positives = 62/73 (84%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
ML+ HSERLAIA+GLI T PG+PIRI KNLRVCGDCH FTKLVSK F REIVVRDANRFH
Sbjct: 386 MLHKHSERLAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFGREIVVRDANRFH 445
Query: 187 HFKDGRCTCGDFW 225
HF G C+C DFW
Sbjct: 446 HFSGGSCSCEDFW 458
>gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 127 bits (318), Expect = 2e-27
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
+L+ HSERLAI++GLI T+ G P+RI KNLRVCGDCH FTKLVSK FEREIVVRDANRFH
Sbjct: 311 LLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFH 370
Query: 187 HFKDGRCTCGDFW 225
HF G C+CGDFW
Sbjct: 371 HFSGGTCSCGDFW 383
>ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial
[Oryza sativa Japonica Group]
Length = 401
Score = 127 bits (318), Expect = 2e-27
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
+L+ HSERLAI++GLI T+ G P+RI KNLRVCGDCH FTKLVSK FEREIVVRDANRFH
Sbjct: 329 LLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFH 388
Query: 187 HFKDGRCTCGDFW 225
HF G C+CGDFW
Sbjct: 389 HFSGGTCSCGDFW 401
>emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza
sativa Indica Group] gi|116310420|emb|CAH67428.1|
OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 127 bits (318), Expect = 2e-27
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
+L+ HSERLAI++GLI T+ G P+RI KNLRVCGDCH FTKLVSK FEREIVVRDANRFH
Sbjct: 867 LLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFH 926
Query: 187 HFKDGRCTCGDFW 225
HF G C+CGDFW
Sbjct: 927 HFSGGTCSCGDFW 939
>ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Brachypodium distachyon]
Length = 940
Score = 126 bits (317), Expect = 3e-27
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
+L+ HSERLAI++GLI T PG+P+RI KNLRVCGDCH FTKLVSK F+R+IVVRDANRFH
Sbjct: 868 VLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFH 927
Query: 187 HFKDGRCTCGDFW 225
HF G C+CGDFW
Sbjct: 928 HFSGGSCSCGDFW 940
>ref|XP_007203303.1| hypothetical protein PRUPE_ppa025850mg, partial [Prunus persica]
gi|462398834|gb|EMJ04502.1| hypothetical protein
PRUPE_ppa025850mg, partial [Prunus persica]
Length = 554
Score = 124 bits (311), Expect = 1e-26
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = +1
Query: 7 MLYGHSERLAIAYGLIVTSPGVPIRITKNLRVCGDCHTFTKLVSKFFEREIVVRDANRFH 186
MLY HSE+LAIA+GLI T+ G PIRITKNLRVCGDCHTFTK VS +R I+VRD NRFH
Sbjct: 482 MLYSHSEKLAIAFGLIATADGTPIRITKNLRVCGDCHTFTKFVSAVTQRVIIVRDVNRFH 541
Query: 187 HFKDGRCTCGDFW 225
HF++G C+CGD+W
Sbjct: 542 HFREGTCSCGDYW 554