BLASTX nr result
ID: Cocculus23_contig00045247
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00045247
(343 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi... 129 5e-28
emb|CBI26355.3| unnamed protein product [Vitis vinifera] 129 5e-28
ref|XP_007034951.1| Tetratricopeptide repeat-like superfamily pr... 125 8e-27
ref|XP_002517025.1| pentatricopeptide repeat-containing protein,... 120 1e-25
ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containi... 115 8e-24
ref|XP_006838870.1| hypothetical protein AMTR_s00002p00266930 [A... 72 6e-11
ref|XP_006845523.1| hypothetical protein AMTR_s00019p00168020 [A... 71 2e-10
ref|XP_004502561.1| PREDICTED: putative pentatricopeptide repeat... 70 2e-10
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
gb|EPS67675.1| hypothetical protein M569_07099 [Genlisea aurea] 70 3e-10
ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, par... 69 5e-10
gb|EMT24450.1| hypothetical protein F775_19925 [Aegilops tauschii] 69 7e-10
ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago t... 69 7e-10
gb|EYU20172.1| hypothetical protein MIMGU_mgv11b016157mg [Mimulu... 68 1e-09
ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selag... 68 1e-09
ref|XP_006856598.1| hypothetical protein AMTR_s00046p00214930 [A... 67 2e-09
ref|XP_006838888.1| hypothetical protein AMTR_s00002p00268120 [A... 67 2e-09
ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_004986483.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-09
>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 129 bits (323), Expect = 5e-28
Identities = 59/91 (64%), Positives = 76/91 (83%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
+ LKSIHA LLI S+ SSE +NK++R+Y+R GATD+AHKVFDEI+QPNA+LWT+LIHG
Sbjct: 16 KSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHG 75
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVSA 343
+VEN YDEA +LF +M RE +S LNFT+S+
Sbjct: 76 YVENRQYDEAFSLFIQMRREPISVLNFTISS 106
>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 129 bits (323), Expect = 5e-28
Identities = 59/91 (64%), Positives = 76/91 (83%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
+ LKSIHA LLI S+ SSE +NK++R+Y+R GATD+AHKVFDEI+QPNA+LWT+LIHG
Sbjct: 16 KSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHG 75
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVSA 343
+VEN YDEA +LF +M RE +S LNFT+S+
Sbjct: 76 YVENRQYDEAFSLFIQMRREPISVLNFTISS 106
>ref|XP_007034951.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|590658795|ref|XP_007034952.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713980|gb|EOY05877.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713981|gb|EOY05878.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 683
Score = 125 bits (313), Expect = 8e-27
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
+PLKSIHA LLI GSI SS++ LNK +R YAR G+ +AHK+FD+I QPNAFLWTALIHG
Sbjct: 32 KPLKSIHARLLIDGSIASSDLVLNKFLRFYARFGSIQYAHKLFDQIPQPNAFLWTALIHG 91
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVSA 343
+VE+ NY E L+LF M ++SV PLNFT+++
Sbjct: 92 YVEHRNYQEVLSLFCHMCKKSVFPLNFTLAS 122
>ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543660|gb|EEF45188.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 640
Score = 120 bits (302), Expect = 1e-25
Identities = 53/91 (58%), Positives = 74/91 (81%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
+ L +IHAHLLISGSI SS++TLNK++R+Y++ GA +AHK+FDE +PN+FLWTALIHG
Sbjct: 17 KTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHG 76
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVSA 343
EN+ Y+ A A F +M RE++ PLNFT+++
Sbjct: 77 FTENNQYENAFAFFIKMHRENIVPLNFTIAS 107
>ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 668
Score = 119 bits (299), Expect = 3e-25
Identities = 56/89 (62%), Positives = 73/89 (82%)
Frame = +2
Query: 77 LKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
LKS+HAHLL+ GSI SS++ LNKIIR+Y+R GAT++A KVFDEI + N FLWT++IHG+V
Sbjct: 18 LKSVHAHLLVCGSIASSDLVLNKIIRLYSRFGATNYARKVFDEIPERNPFLWTSIIHGYV 77
Query: 257 ENSNYDEALALFRRMLRESVSPLNFTVSA 343
ENS + EA +LFR M V+PLNFT+S+
Sbjct: 78 ENSQHTEAFSLFRDMRIGDVTPLNFTISS 106
>ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum lycopersicum]
Length = 668
Score = 115 bits (287), Expect = 8e-24
Identities = 54/89 (60%), Positives = 71/89 (79%)
Frame = +2
Query: 77 LKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
LKS+HAHLL+ GSI SS++ LNKIIR+Y R GAT++A KVFDEI + N FLWT++IHG+V
Sbjct: 18 LKSVHAHLLVCGSIASSDLVLNKIIRLYTRFGATNYARKVFDEIPERNPFLWTSMIHGYV 77
Query: 257 ENSNYDEALALFRRMLRESVSPLNFTVSA 343
ENS + +A +LF M V+PLNFT+S+
Sbjct: 78 ENSQHTQAFSLFLDMHIGDVTPLNFTISS 106
>ref|XP_006838870.1| hypothetical protein AMTR_s00002p00266930 [Amborella trichopoda]
gi|548841376|gb|ERN01439.1| hypothetical protein
AMTR_s00002p00266930 [Amborella trichopoda]
Length = 646
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/91 (43%), Positives = 50/91 (54%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
+ L HAHLLISG + S LN +IR ARLG HA + PNAFLWT+ IH
Sbjct: 17 KQLHQAHAHLLISG-LLSLPHLLNALIRTCARLGLAQHAERALSHDPNPNAFLWTSAIHA 75
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVSA 343
V ++ A LF+ ML PL FT+S+
Sbjct: 76 QVCSNLPKHAFVLFQSMLAHQARPLEFTLSS 106
>ref|XP_006845523.1| hypothetical protein AMTR_s00019p00168020 [Amborella trichopoda]
gi|548848095|gb|ERN07198.1| hypothetical protein
AMTR_s00019p00168020 [Amborella trichopoda]
Length = 266
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
R LK IHA+LL++G + L K+IR +AH + D +S PNAFLWTA+I
Sbjct: 26 RQLKQIHAYLLVNGQS-QNNFLLTKLIRTLVSARCLGYAHSILDSVSNPNAFLWTAMIRA 84
Query: 251 HVENSNY---DEALALFRRMLRESVSPLNFTVSA 343
+ + ++ ++AL L+ +M +++ PL FT+S+
Sbjct: 85 YSQTHDHAQAEQALLLYTQMQKQATPPLTFTLSS 118
>ref|XP_004502561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Cicer arietinum]
Length = 672
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/90 (35%), Positives = 54/90 (60%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
R + +H LL +G++ SS +T N+++++Y+R G+ A K+FDE+ Q N F WT LI
Sbjct: 11 REARQLHLSLLKTGTLHSSVITTNRLLQLYSRRGSLQDASKLFDEMPQTNPFSWTTLIEA 70
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVS 340
H+ + N ++L LF M ++ N +S
Sbjct: 71 HINSGNTHKSLQLFHAMPHKTHYSWNLLIS 100
>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Citrus sinensis]
Length = 670
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +2
Query: 86 IHAHLLISGSIFSSEVTL-NKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHVEN 262
+HAH+L GS F +++ + N I+ YA+ G D A K+FDE+ + WTALI G+ +N
Sbjct: 118 VHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 175
Query: 263 SNYDEALALFRRMLRESVSPLNFTVSA 343
+ A+ LF +MLR + P FT+S+
Sbjct: 176 DQPENAIILFSQMLRLGLKPNQFTLSS 202
>gb|EPS67675.1| hypothetical protein M569_07099 [Genlisea aurea]
Length = 682
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/88 (35%), Positives = 54/88 (61%)
Frame = +2
Query: 77 LKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
++S+HAH++ +G + ++ Y + G DHA +FDE++ F W ALI G+V
Sbjct: 83 VESLHAHIVKNG-VSHDVFVATFLLHAYCKCGNMDHAQNLFDEMTNRTVFTWGALISGYV 141
Query: 257 ENSNYDEALALFRRMLRESVSPLNFTVS 340
+NSN + ++ +FR+ML + P N+T+S
Sbjct: 142 QNSNPESSVVVFRKMLEAGIYPTNYTLS 169
>ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, partial [Citrus
clementina] gi|557552589|gb|ESR63218.1| hypothetical
protein CICLE_v100176691mg, partial [Citrus clementina]
Length = 317
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 86 IHAHLLISGSIFSSEVTL-NKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHVEN 262
+HAH+L GS F ++ + N I+ YA+ G D A K+FDE+ + WTALI G+ +N
Sbjct: 88 VHAHIL--GSAFKHDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 145
Query: 263 SNYDEALALFRRMLRESVSPLNFTVSA 343
+ A+ LF +MLR + P FT+S+
Sbjct: 146 DQPENAIILFSQMLRLGLKPNQFTLSS 172
>gb|EMT24450.1| hypothetical protein F775_19925 [Aegilops tauschii]
Length = 599
Score = 68.9 bits (167), Expect = 7e-10
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +2
Query: 80 KSIHAHLLISGSIFSSEVTL-NKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
K +HA L+ SG F SE L ++ +YA+ G + A +VFD + N LWT++IHG+V
Sbjct: 271 KGVHALLIKSG--FESEQDLVPSLVNLYAKCGDLETAQEVFDAVHCKNVVLWTSMIHGYV 328
Query: 257 ENSNYDEALALFRRMLRESVSPLNFTVSA 343
E S D+AL +F MLR V P TVS+
Sbjct: 329 EGSRPDKALTMFDSMLRTDVQPNVTTVSS 357
>ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 672
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/90 (35%), Positives = 54/90 (60%)
Frame = +2
Query: 71 RPLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHG 250
R + +H LL +G++ SS +T N+++++Y+R G+ A K+FDE+ QPN F W LI
Sbjct: 11 REARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEA 70
Query: 251 HVENSNYDEALALFRRMLRESVSPLNFTVS 340
H+ + +++L LF M ++ N VS
Sbjct: 71 HINLGHRNKSLELFHAMPHKTHYSWNLIVS 100
>gb|EYU20172.1| hypothetical protein MIMGU_mgv11b016157mg [Mimulus guttatus]
Length = 590
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/87 (34%), Positives = 51/87 (58%)
Frame = +2
Query: 74 PLKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGH 253
P K IHA L ++G + S+ +++ +Y HAH +FD+I PN FLW LI G+
Sbjct: 29 PGKQIHARLCLNGVVLSNVNLATQLVNLYTVCKFLRHAHHLFDKIPSPNIFLWNILIRGY 88
Query: 254 VENSNYDEALALFRRMLRESVSPLNFT 334
N ++ A++L+R+++ + + P FT
Sbjct: 89 AWNGPHEAAISLYRQLIDQELVPDKFT 115
>ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein
SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 80 KSIHAHLLISGSIFSSEVTL-NKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
+ IHA + SG + SS L N ++ +Y R G+ + A KVFD + P+AF WT++I
Sbjct: 107 REIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACT 166
Query: 257 ENSNYDEALALFRRMLRESVSPLNFTVSA 343
EN EAL LF RM E + P + T+++
Sbjct: 167 ENCELLEALELFHRMNLEGIPPTSVTLAS 195
>ref|XP_006856598.1| hypothetical protein AMTR_s00046p00214930 [Amborella trichopoda]
gi|548860479|gb|ERN18065.1| hypothetical protein
AMTR_s00046p00214930 [Amborella trichopoda]
Length = 400
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +2
Query: 80 KSIHAHLLISGSIFSSEVTLNK-IIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
+++ AH++ SG F V L+ ++ +Y++ G TDHA KVFD +S+ N WT+L+ G+
Sbjct: 95 QAVQAHMIKSG--FHEHVFLSTFLVNVYSKCGHTDHARKVFDSMSRRNIVSWTSLMTGYA 152
Query: 257 ENSNYDEALALFRRMLRESVSPLNFTVSA 343
NS +++A+ LF +L P N+T A
Sbjct: 153 HNSQFEQAVNLFCELLEIGCYPTNYTFGA 181
>ref|XP_006838888.1| hypothetical protein AMTR_s00002p00268120 [Amborella trichopoda]
gi|548841394|gb|ERN01457.1| hypothetical protein
AMTR_s00002p00268120 [Amborella trichopoda]
Length = 364
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/86 (37%), Positives = 56/86 (65%)
Frame = +2
Query: 83 SIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHVEN 262
SIH+HL+ SG S++ ++ +I++Y + G+ A ++FDE++QP WTA+I+G++
Sbjct: 128 SIHSHLIRSG-FDSNQFVMSSLIKLYTKGGSIVSARQIFDEMNQPEIVAWTAMINGYLTQ 186
Query: 263 SNYDEALALFRRMLRESVSPLNFTVS 340
+EALALF+RM P + T++
Sbjct: 187 GELNEALALFKRMCMVGPEPDSVTLT 212
>ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 614
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +2
Query: 77 LKSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHV 256
LK +HA +L +G + + L ++I + LG T +A KVFDE+ +P FLW +I +V
Sbjct: 58 LKQLHAVILTTGISVKNSL-LTRLITSFIALGETSYARKVFDEMHKPRVFLWNTMIKAYV 116
Query: 257 ENSNYDEALALFRRMLRESVSPLNFT 334
++ ++ EA A++RRM R V P FT
Sbjct: 117 KDGDFIEAAAVYRRMHRLGVRPDEFT 142
>ref|XP_004986483.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Setaria italica]
Length = 697
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +2
Query: 80 KSIHAHLLISGSIFSSEVTLNKIIRIYARLGATDHAHKVFDEISQPNAFLWTALIHGHVE 259
+++HAHLL+SG+ +S N +I +Y+ A +VF + +PN WT L+ G V+
Sbjct: 39 RALHAHLLLSGAAAASTFLANHLITMYSHCADAASAVRVFGAVPRPNLVSWTTLVSGLVQ 98
Query: 260 NSNYDEALALFRRMLRESVSPLNFTVSA 343
NS + +ALA F M R + P F +S+
Sbjct: 99 NSMHADALAAFTAMRRADIVPTQFALSS 126