BLASTX nr result
ID: Cocculus23_contig00045193
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00045193
(370 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007032546.1| Pentatricopeptide repeat (PPR) superfamily p... 86 5e-15
ref|XP_007217715.1| hypothetical protein PRUPE_ppa004522mg [Prun... 83 5e-14
ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citr... 74 2e-11
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu... 74 2e-11
ref|XP_004306142.1| PREDICTED: ATP-dependent zinc metalloproteas... 72 8e-11
ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_002324059.1| pentatricopeptide repeat-containing family p... 71 2e-10
ref|XP_007134995.1| hypothetical protein PHAVU_010G093000g [Phas... 70 3e-10
ref|XP_007214270.1| hypothetical protein PRUPE_ppa026204mg [Prun... 68 2e-09
ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [A... 67 3e-09
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_006410847.1| hypothetical protein EUTSA_v10017676mg [Eutr... 64 2e-08
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera] 64 2e-08
ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
emb|CBI16398.3| unnamed protein product [Vitis vinifera] 63 4e-08
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] 63 4e-08
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 63 5e-08
ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_006573426.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
>ref|XP_007032546.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508711575|gb|EOY03472.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 480
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = -3
Query: 239 CNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLD 60
CN NFLS+K ++L L CSS++ L+Q+HAQI IS LH D +L++E++RF +LSP+ +L
Sbjct: 2 CNQNFLSRKNQFLVFLKLCSSIKHLSQVHAQILISNLHQDSFLLTELVRFSSLSPYKNLS 61
Query: 59 YVRNLLYRVLHPIPSSWN 6
Y LL L+ PS+WN
Sbjct: 62 YTHTLLVNSLNSTPSTWN 79
>ref|XP_007217715.1| hypothetical protein PRUPE_ppa004522mg [Prunus persica]
gi|462413865|gb|EMJ18914.1| hypothetical protein
PRUPE_ppa004522mg [Prunus persica]
Length = 505
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = -3
Query: 242 NCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSL 63
NCN NF S+K + L LLN C + ++L+Q+HAQIQ+SG D +L+++++RFCALSP +
Sbjct: 11 NCNSNFGSKKQQCLYLLNLCFTFKQLSQVHAQIQVSGFQRDHFLLTQLIRFCALSPSKNF 70
Query: 62 DYVRNLLYRVLHPIPSSWN 6
+Y R LL PSSWN
Sbjct: 71 NYARTLLDHSESSPPSSWN 89
>ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citrus clementina]
gi|557533214|gb|ESR44397.1| hypothetical protein
CICLE_v10011507mg [Citrus clementina]
Length = 514
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -3
Query: 257 PAKIPNCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALS 78
P K NCN + LS+ + LS L C S + L QIHAQIQ+SGL D ++ E++RFC LS
Sbjct: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
Query: 77 PFGSLDYVRNLLYRVLH-PIPSSWNH 3
+L Y R++L ++ +P WN+
Sbjct: 74 SSKNLTYARSILCNYVNDSVPIPWNN 99
>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
putative [Ricinus communis]
Length = 1157
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = -3
Query: 203 LSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNLLYRVLHP 24
LSLL CSS++ L QIH+QIQ+SGL GD +L++++++F +LSP L Y +++L +HP
Sbjct: 668 LSLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHP 727
Query: 23 IPSSWN 6
+P WN
Sbjct: 728 VPLPWN 733
>ref|XP_004306142.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1152
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = -3
Query: 224 LSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNL 45
L +K + LSLL+ C S + +QIHAQI +SGLH D YL++++++FCALSP + Y + L
Sbjct: 664 LVEKQQCLSLLSLCLSFKPFSQIHAQIHLSGLHRDPYLLTQLIKFCALSPAKNFTYAQTL 723
Query: 44 LYRVLHPIPSSWN 6
L PSSWN
Sbjct: 724 LRHSSASPPSSWN 736
>ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = -3
Query: 224 LSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNL 45
LS+K + LSLLN C SM +L QI AQ+ +SGL+ D ++SE++ FC+LSP +L + R+
Sbjct: 13 LSKKQQCLSLLNSCRSMDQLRQIQAQVHVSGLYQDTRVLSELVYFCSLSPSKNLRHARSF 72
Query: 44 LYRVLHPIPSSWN 6
++ P P SWN
Sbjct: 73 VHHAATPSPISWN 85
>ref|XP_002324059.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867061|gb|EEF04192.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 505
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3
Query: 242 NCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSL 63
N N LS+K LSLL SS++ ++QIHAQI +SGL D L++E++RFC+LSP L
Sbjct: 11 NSNSKLLSKKNHCLSLLKLSSSVKHVSQIHAQILVSGLQQDTNLLTELIRFCSLSPSKHL 70
Query: 62 DYVRNLLYRVLHPIPSSWN 6
Y +LLY L +P WN
Sbjct: 71 SYAHSLLYNSLDSLP-PWN 88
>ref|XP_007134995.1| hypothetical protein PHAVU_010G093000g [Phaseolus vulgaris]
gi|561008040|gb|ESW06989.1| hypothetical protein
PHAVU_010G093000g [Phaseolus vulgaris]
Length = 502
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = -3
Query: 251 KIPNCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPF 72
++P N F S+K + L LLN C SM +L QI AQI +SGL+ D + +SE++ FC+LSP
Sbjct: 3 RLPTLNTQFFSKKHECLFLLNSCGSMDQLRQIQAQIHLSGLYQDTHTLSELVYFCSLSPS 62
Query: 71 GSLDYVRNLLYRVLHPIPSSWN 6
+L + L++ P SWN
Sbjct: 63 KNLRHACALVHDAATSSPISWN 84
>ref|XP_007214270.1| hypothetical protein PRUPE_ppa026204mg [Prunus persica]
gi|462410135|gb|EMJ15469.1| hypothetical protein
PRUPE_ppa026204mg [Prunus persica]
Length = 684
Score = 67.8 bits (164), Expect = 2e-09
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = -3
Query: 281 LFSNMSFSPAKIPNCNLNFLSQKLK---YLSLLNDCSSMRELTQIHAQIQISGLHGDGYL 111
LF S SP K N N + ++ LSLL C SM +L QI +Q+ ++GL DG+
Sbjct: 23 LFHTRSLSPHKHKPINWNTTHKSVQANPLLSLLETCKSMSQLKQIQSQMILTGLISDGFA 82
Query: 110 MSEVLRFCALSPFGSLDYVRNLLYRVLHPIPSSWN 6
S ++ FCALS +LDY +LY +P SWN
Sbjct: 83 SSRLIAFCALSESRNLDYCNKILYNTQNPNVFSWN 117
>ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [Amborella trichopoda]
gi|548844970|gb|ERN04489.1| hypothetical protein
AMTR_s00081p00056740 [Amborella trichopoda]
Length = 406
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -3
Query: 203 LSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNLLYRVLHP 24
L LL C+SM++L QIHAQ +GLH D + +S+++ FC++SPFG LD+ L + P
Sbjct: 37 LFLLQSCTSMKQLKQIHAQFFKTGLHNDQFALSKIIEFCSISPFGDLDFAHLLFGTISEP 96
Query: 23 IPSSWN 6
WN
Sbjct: 97 NQFIWN 102
>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = -3
Query: 263 FSPAKIPNCNLN--FLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRF 90
F P + N + FLS K + LSLLN CSS L +IHAQI +SGL D + +E+LR
Sbjct: 12 FFPINVHNYSSKPKFLSTKHQLLSLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRV 71
Query: 89 CALSPFGSLDYVRNLLYRV-LHPIPSSWN 6
ALSP +L Y +LL+ H WN
Sbjct: 72 AALSPSRNLSYGCSLLFHCHFHSATMPWN 100
>ref|XP_006410847.1| hypothetical protein EUTSA_v10017676mg [Eutrema salsugineum]
gi|557112016|gb|ESQ52300.1| hypothetical protein
EUTSA_v10017676mg [Eutrema salsugineum]
Length = 514
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = -3
Query: 266 SFSPAKIPNCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFC 87
S S AKI N +F S+K + L LL CSS++ L QIH QI +S L D +++SE++R
Sbjct: 5 SESTAKI--INSSFKSKKHQCLVLLKLCSSIKHLLQIHGQIHVSALQADSFIISELIRVS 62
Query: 86 ALSPFGSLDYVRNLLYRVLHPIPSSWN 6
+LS L + R LL PS+WN
Sbjct: 63 SLSHAKDLSFARTLLLHSSDSTPSTWN 89
>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/86 (45%), Positives = 48/86 (55%)
Frame = -3
Query: 263 FSPAKIPNCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCA 84
F P K N NLN +S K + LSLLN CSSM+ L QI G G++ +LRFCA
Sbjct: 12 FCPPKPSNGNLNLVSTKQQCLSLLNLCSSMKHLFQI---------RGHGFIAGPLLRFCA 62
Query: 83 LSPFGSLDYVRNLLYRVLHPIPSSWN 6
SP G+L++ R LL SSWN
Sbjct: 63 SSPLGNLNHARVLLSGSEKSEVSSWN 88
>ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = -3
Query: 263 FSPAKIPNCNLN--FLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRF 90
F P + N + FLS K + LSLL CSS L +IHAQI +SGL D + +E+LR
Sbjct: 12 FFPINVHNYSSKPKFLSTKHQLLSLLKHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRV 71
Query: 89 CALSPFGSLDYVRNLLYRV-LHPIPSSWN 6
ALSP +L Y +LL+ H WN
Sbjct: 72 AALSPSRNLSYGCSLLFHCHFHSATMPWN 100
>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = -3
Query: 242 NCNLNFLSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSL 63
N N +F+ +LSLL C S+ +L QI +Q+ ++GL DG+ S ++ FCA+S + L
Sbjct: 42 NTNHSFVLSN-PFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDL 100
Query: 62 DYVRNLLYRVLHPIPSSWN 6
DY N+L+ +P SWN
Sbjct: 101 DYCTNILFNTRNPNTFSWN 119
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Frame = -3
Query: 266 SFSPAKI-PNCNLNF---------LSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDG 117
SFSP+ + P L+F L Q L+LL+ C S + L QIH+QI +GLH
Sbjct: 5 SFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQ 64
Query: 116 YLMSEVLRFCALSPFGSLDYVRNLLYRVLHPIPSSWN 6
+ +S+++ FCA+SPFG+L Y L + P WN
Sbjct: 65 FALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWN 101
>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Frame = -3
Query: 266 SFSPAKI-PNCNLNF---------LSQKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDG 117
SFSP+ + P L+F L Q L+LL+ C S + L QIH+QI +GLH
Sbjct: 5 SFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQ 64
Query: 116 YLMSEVLRFCALSPFGSLDYVRNLLYRVLHPIPSSWN 6
+ +S+++ FCA+SPFG+L Y L + P WN
Sbjct: 65 FALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWN 101
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = -3
Query: 203 LSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNLLYRVLHP 24
L+LL++C +++ L QIH+QI +GLH + +S+++ FCA+SP G L Y +L + +P
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 23 IPSSWNH 3
WNH
Sbjct: 92 NHVIWNH 98
>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = -3
Query: 206 YLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNLLYRVLH 27
+LSLL C S+ +L QI +Q+ ++GL DG+ S ++ FCA+S + LDY N+L+ +
Sbjct: 9 FLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRN 68
Query: 26 PIPSSWN 6
P SWN
Sbjct: 69 PNTFSWN 75
>ref|XP_006573426.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 677
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = -3
Query: 218 QKLKYLSLLNDCSSMRELTQIHAQIQISGLHGDGYLMSEVLRFCALSPFGSLDYVRNLLY 39
+K LSLL C S+ +L QI AQ+ ++GL DG+ MS ++ FCALS +L+Y +LY
Sbjct: 48 RKNPLLSLLERCKSLDQLKQIQAQMVLTGLVNDGFAMSRLVAFCALSESRALEYCTKILY 107
Query: 38 RVLHPIPSSWN 6
+ P SWN
Sbjct: 108 WIHEPNVFSWN 118