BLASTX nr result

ID: Cocculus23_contig00045044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00045044
         (342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ11784.1| dehydration responsive protein [Corchorus olitor...   119   4e-43
ref|YP_001949470.1| hypothetical protein BMULJ_05092 [Burkholder...    93   3e-17
gb|ABM53544.1| conserved hypothetical protein [uncultured beta p...    93   4e-17
dbj|BAJ11783.1| dehydration responsive protein [Corchorus capsul...    91   2e-16
dbj|BAJ11779.1| dehydration responsive protein [Corchorus tridens]     87   2e-15
dbj|BAJ11781.1| dehydration responsive protein [Corchorus pseudo...    82   3e-15
emb|CBA31924.1| hypothetical protein Csp_D29550 [Curvibacter put...    86   5e-15
dbj|BAJ11780.1| dehydration responsive protein [Corchorus aestuans]    76   4e-12
dbj|BAJ11782.1| dehydration responsive protein [Corchorus triloc...    71   1e-10
gb|AEQ20465.1| hypothetical protein [uncultured bacterium CSL142]      65   1e-08
ref|YP_001949469.1| hypothetical protein BMULJ_05091 [Burkholder...    43   4e-06

>dbj|BAJ11784.1| dehydration responsive protein [Corchorus olitorius]
          Length = 215

 Score =  119 bits (299), Expect(3) = 4e-43
 Identities = 58/62 (93%), Positives = 58/62 (93%)
 Frame = -3

Query: 301 PLAVSPRFPVQRSSA*GESAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCLTVGIVSF 122
           P AVSPRFPVQRSS  GESAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGC TVGIVSF
Sbjct: 36  PAAVSPRFPVQRSSEQGESAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPTVGIVSF 95

Query: 121 WF 116
           WF
Sbjct: 96  WF 97



 Score = 70.5 bits (171), Expect(3) = 4e-43
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -1

Query: 111 KVLRQIRARNSRDWDERLYAAKQSEVVPRKASKLQSY 1
           KVLRQIRARNSRD DERLYAAKQSEVVPRKASKLQSY
Sbjct: 99  KVLRQIRARNSRDRDERLYAAKQSEVVPRKASKLQSY 135



 Score = 31.2 bits (69), Expect(3) = 4e-43
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 341 ANADMSSDNGGERPPRRKPK 282
           ANADMSSDN GE+P    P+
Sbjct: 23  ANADMSSDNAGEKPAAVSPR 42


>ref|YP_001949470.1| hypothetical protein BMULJ_05092 [Burkholderia multivorans ATCC
           17616] gi|501444602|ref|WP_012468051.1| hypothetical
           protein [Burkholderia multivorans]
           gi|189337865|dbj|BAG46934.1| hypothetical protein
           BMULJ_05092 [Burkholderia multivorans ATCC 17616]
          Length = 123

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/48 (89%), Positives = 44/48 (91%)
 Frame = +3

Query: 198 LTCFPSATHLCLALGADSPYADER*TGNLGLTARGPFTPIIATHVSIR 341
           +TCFPSATH CLALGADSPYADER  GNLGLTARGPFTP IATHVSIR
Sbjct: 1   MTCFPSATHFCLALGADSPYADERCVGNLGLTARGPFTPFIATHVSIR 48


>gb|ABM53544.1| conserved hypothetical protein [uncultured beta proteobacterium
           CBNPD1 BAC clone 578]
          Length = 109

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/52 (86%), Positives = 45/52 (86%)
 Frame = +3

Query: 186 GAGILTCFPSATHLCLALGADSPYADER*TGNLGLTARGPFTPIIATHVSIR 341
           G GILTCFPSATHLCLALGADSPYADER  GNL LTARG FTP  ATHVSIR
Sbjct: 3   GTGILTCFPSATHLCLALGADSPYADERCVGNLALTARGLFTPFNATHVSIR 54


>dbj|BAJ11783.1| dehydration responsive protein [Corchorus capsularis]
          Length = 53

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/44 (95%), Positives = 42/44 (95%)
 Frame = -3

Query: 247 SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCLTVGIVSFWF 116
           SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGC TVGIV FWF
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPTVGIVGFWF 44


>dbj|BAJ11779.1| dehydration responsive protein [Corchorus tridens]
          Length = 53

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/44 (90%), Positives = 40/44 (90%)
 Frame = -3

Query: 247 SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCLTVGIVSFWF 116
           SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGC  VGI  FWF
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPAVGIAGFWF 44


>dbj|BAJ11781.1| dehydration responsive protein [Corchorus pseudo-olitorius]
          Length = 54

 Score = 81.6 bits (200), Expect(2) = 3e-15
 Identities = 39/42 (92%), Positives = 39/42 (92%)
 Frame = -3

Query: 247 SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCLTVGIVSF 122
           SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGC TVGI  F
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPTVGISRF 42



 Score = 25.8 bits (55), Expect(2) = 3e-15
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 131 SQFLVHRRCLGKSG 90
           S+FL HRR LGKSG
Sbjct: 40  SRFLTHRRRLGKSG 53


>emb|CBA31924.1| hypothetical protein Csp_D29550 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 77

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 43/52 (82%), Positives = 43/52 (82%)
 Frame = +3

Query: 186 GAGILTCFPSATHLCLALGADSPYADER*TGNLGLTARGPFTPIIATHVSIR 341
           G GILTCFPSATHLCLALGADS YADER   NL LTARG FTP  ATHVSIR
Sbjct: 2   GTGILTCFPSATHLCLALGADSLYADERCVENLALTARGLFTPFNATHVSIR 53


>dbj|BAJ11780.1| dehydration responsive protein [Corchorus aestuans]
          Length = 71

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/71 (60%), Positives = 46/71 (64%)
 Frame = -3

Query: 247 SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCLTVGIVSFWFIEGA*ANPGT*FKGLG 68
           SAPKARQRCVADGKQVNIPAPSY+AMGGRIAE    VG       +         FKG  
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYNAMGGRIAEDHPAVGNPVDVSKKALRQIRARKFKGTA 60

Query: 67  RAALCCEAIGS 35
           RA + CE IGS
Sbjct: 61  RATMACEVIGS 71


>dbj|BAJ11782.1| dehydration responsive protein [Corchorus trilocularis]
          Length = 71

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/74 (58%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = -3

Query: 247 SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCLTVGI---VSFWFIEGA*ANPGT*FK 77
           SAPKARQRCVADGK VNIPAPSY AMGGRIAE    V +   VS   +    A      K
Sbjct: 1   SAPKARQRCVADGKLVNIPAPSYSAMGGRIAEDHQGVDVPVDVSKMALRQIRARKS---K 57

Query: 76  GLGRAALCCEAIGS 35
           G  RA++ CE IGS
Sbjct: 58  GTARASIACEVIGS 71


>gb|AEQ20465.1| hypothetical protein [uncultured bacterium CSL142]
          Length = 93

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/48 (68%), Positives = 35/48 (72%)
 Frame = +3

Query: 198 LTCFPSATHLCLALGADSPYADER*TGNLGLTARGPFTPIIATHVSIR 341
           +T FPS T   LALG DSP  DER  GNLGL+A GPFT  IATHVSIR
Sbjct: 1   MTDFPSTTPFGLALGTDSPCTDERGAGNLGLSASGPFTRFIATHVSIR 48


>ref|YP_001949469.1| hypothetical protein BMULJ_05091 [Burkholderia multivorans ATCC
           17616] gi|501444601|ref|WP_012468050.1| hypothetical
           protein [Burkholderia multivorans]
           gi|189337864|dbj|BAG46933.1| conserved hypothetical
           protein [Burkholderia multivorans ATCC 17616]
          Length = 90

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 22/40 (55%), Positives = 24/40 (60%)
 Frame = -1

Query: 177 MRWGDGSRKXXXXXXXXXXXS*KVLRQIRARNSRDWDERL 58
           MRWGDGSRK             K LRQIRA++SR W ERL
Sbjct: 1   MRWGDGSRKVVRVLDVPVAALEKALRQIRAQDSRVWRERL 40



 Score = 33.1 bits (74), Expect(2) = 4e-06
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 50 RSNRKWFQEKPLSFS 6
          RSN KWFQEKPLSFS
Sbjct: 43 RSNWKWFQEKPLSFS 57


Top