BLASTX nr result
ID: Cocculus23_contig00044991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044991
(203 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays] 82 8e-14
ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [S... 82 8e-14
gb|EMT08213.1| hypothetical protein F775_15992 [Aegilops tauschii] 80 2e-13
ref|XP_006412675.1| hypothetical protein EUTSA_v10024455mg [Eutr... 79 7e-13
ref|XP_002867333.1| pentatricopeptide repeat-containing protein ... 78 1e-12
emb|CBI33742.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera] 77 2e-12
ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group] g... 77 3e-12
gb|EAY78393.1| hypothetical protein OsI_33480 [Oryza sativa Indi... 77 3e-12
ref|XP_006662333.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
gb|AFN53666.1| hypothetical protein [Linum usitatissimum] 76 4e-12
gb|EXC31089.1| hypothetical protein L484_001076 [Morus notabilis] 76 6e-12
ref|NP_194799.1| pentatricopeptide repeat-containing protein [Ar... 76 6e-12
gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis] 75 7e-12
ref|XP_007205016.1| hypothetical protein PRUPE_ppa003703mg [Prun... 75 7e-12
ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
gb|EYU34329.1| hypothetical protein MIMGU_mgv1a001967mg [Mimulus... 75 9e-12
ref|XP_004229576.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
>ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Setaria italica]
Length = 645
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDEMP+RD F N L++GY QS EAI LF EMQ AK+ PNEIT+V+ LSAC+QLG
Sbjct: 310 LFDEMPERDAFPWNALMAGYVQSKQGKEAIALFHEMQEAKVTPNEITMVNLLSACSQLGA 369
Query: 21 LSQGQWI 1
L G W+
Sbjct: 370 LEMGMWV 376
>gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 82.0 bits (201), Expect = 8e-14
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDEMP+RD+F N L++GY Q+ EAI LF EMQ +K+ PNEIT+V+ LSAC+QLG
Sbjct: 312 LFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGA 371
Query: 21 LSQGQWI 1
L G W+
Sbjct: 372 LEMGMWV 378
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EM--QNAKLRPNEITLVSTLSACAQL 28
+FDE P RD+ N LI GY +SG+P EA+ LF + +RP+E+T++ +S CAQ+
Sbjct: 178 LFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQM 237
Query: 27 GCLSQGQ 7
G L G+
Sbjct: 238 GDLELGK 244
>ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein
SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 82.0 bits (201), Expect = 8e-14
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDEMP+RD+F N L++GY Q+ EAI LF EMQ +K+ PNEIT+V+ LSAC+QLG
Sbjct: 312 LFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGA 371
Query: 21 LSQGQWI 1
L G W+
Sbjct: 372 LEMGMWV 378
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EM--QNAKLRPNEITLVSTLSACAQL 28
+FDE P RD+ N LI GY +SG+P EA+ LF + +RP+E+T++ +S CAQ+
Sbjct: 178 LFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQM 237
Query: 27 GCLSQGQ 7
G L G+
Sbjct: 238 GDLELGK 244
>gb|EMT08213.1| hypothetical protein F775_15992 [Aegilops tauschii]
Length = 473
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFDEMP+RD F N L++GY Q EA+ LF EMQ AK++P+EIT+V+ LSAC+QLG
Sbjct: 140 VFDEMPERDAFPWNALMAGYVQCKQGKEALGLFHEMQEAKVKPDEITMVNLLSACSQLGA 199
Query: 21 LSQGQWI 1
L G W+
Sbjct: 200 LEMGMWV 206
>ref|XP_006412675.1| hypothetical protein EUTSA_v10024455mg [Eutrema salsugineum]
gi|557113845|gb|ESQ54128.1| hypothetical protein
EUTSA_v10024455mg [Eutrema salsugineum]
Length = 790
Score = 79.0 bits (193), Expect = 7e-13
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDE PD+ L N +ISGYTQ+G+ +AI LF EMQ ++ PN IT+ LSACAQLG
Sbjct: 374 IFDESPDKSLATWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPITITCILSACAQLGT 433
Query: 21 LSQGQWI 1
LS G+W+
Sbjct: 434 LSLGKWV 440
>ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313169|gb|EFH43592.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 792
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDE P++ L N +ISGYTQ+G+ +AI LF EMQN++ PN +T+ LSACAQLG
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGA 435
Query: 21 LSQGQWI 1
LS G+W+
Sbjct: 436 LSLGKWV 442
>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FD M +RD N +I GYTQ+GMP EA+ LF M AK +PNE+T++S LSAC QLG
Sbjct: 146 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 205
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 206 LESGRWV 212
>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FD M +RD N +I GYTQ+GMP EA+ LF M AK +PNE+T++S LSAC QLG
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 271
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 272 LESGRWV 278
>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FD M +RD N +I GYTQ+GMP EA+ LF M AK +PNE+T++S LSAC QLG
Sbjct: 159 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 218
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 219 LESGRWV 225
>ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative
selenium-binding protein-like [Oryza sativa Japonica
Group] gi|31431939|gb|AAP53645.1| pentatricopeptide,
putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein
OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa
Japonica Group]
Length = 651
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFDEMP+RD+F N L++GY Q EA+ LF EMQ A + P+EIT+V+ L+AC+QLG
Sbjct: 316 VFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGA 375
Query: 21 LSQGQWI 1
L G W+
Sbjct: 376 LEMGMWV 382
>gb|EAY78393.1| hypothetical protein OsI_33480 [Oryza sativa Indica Group]
Length = 459
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFDEMP+RD+F N L++GY Q EA+ LF EMQ A + P+EIT+V+ L+AC+QLG
Sbjct: 316 VFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGA 375
Query: 21 LSQGQWI 1
L G W+
Sbjct: 376 LEMGMWV 382
>ref|XP_006662333.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Oryza brachyantha]
Length = 653
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFDEM DRD+F N L++GY Q + EA+ LF EMQ A++ P+EIT+V+ L+AC+ LG
Sbjct: 318 VFDEMSDRDVFPWNALMTGYVQCKLCKEALALFHEMQEARVEPDEITMVNLLTACSHLGA 377
Query: 21 LSQGQWI 1
L G W+
Sbjct: 378 LEMGMWV 384
>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAK--LRPNEITLVSTLSACAQL 28
+FD MP +D+ N LISGY QSG P EA+ +F E+Q K RP+++TL+STLSACAQL
Sbjct: 431 IFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQL 490
Query: 27 GCLSQGQWI 1
G + G+WI
Sbjct: 491 GAMDIGEWI 499
>gb|EXC31089.1| hypothetical protein L484_001076 [Morus notabilis]
Length = 625
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FD M DRD+ N +I GY Q GMP E++ LF +M AK+RPNE+T+++ LSAC Q+G
Sbjct: 209 LFDRMGDRDVVCWNVMIDGYAQHGMPNESLFLFRKMLAAKVRPNEVTVLAVLSACGQIGA 268
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 269 LESGRWL 275
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFD + D+D+ N +I GY G +A+ LF EM +P +IT + LSACA G
Sbjct: 310 VFDRIRDKDVIAWNTMIVGYAMHGFSQDALQLFNEMCRIGYQPTDITFIGVLSACAHAGL 369
Query: 21 LSQGQ 7
+SQGQ
Sbjct: 370 VSQGQ 374
>ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis
thaliana] gi|7269971|emb|CAB79788.1| putative protein
[Arabidopsis thaliana] gi|332660398|gb|AEE85798.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 792
Score = 75.9 bits (185), Expect = 6e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDE P++ L N +ISGYTQ+G+ +AI LF EMQ ++ PN +T+ LSACAQLG
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 21 LSQGQWI 1
LS G+W+
Sbjct: 436 LSLGKWV 442
>gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]
Length = 619
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFD M +DL N +ISGY Q+G+ EAI LF +M+ A + PN+ITLV LSACAQ+G
Sbjct: 231 VFDSMTKKDLVTWNAMISGYAQNGLSDEAIRLFGDMKEAGINPNKITLVGVLSACAQVGA 290
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 291 LDMGKWV 297
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFDE+ R L N +ISGY++ G EA+ LF EM++ + P E+TLVS L AC LG
Sbjct: 130 VFDEITLRGLSSWNSMISGYSKMGYAREAVELFGEMRDDGIAPVEMTLVSVLGACGDLGD 189
Query: 21 LSQGQWI 1
LS G+W+
Sbjct: 190 LSLGRWV 196
>ref|XP_007205016.1| hypothetical protein PRUPE_ppa003703mg [Prunus persica]
gi|462400658|gb|EMJ06215.1| hypothetical protein
PRUPE_ppa003703mg [Prunus persica]
Length = 555
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FD M +RD+ N +I GY Q GMP EA+ LF +M AK++PNE+T++S LSAC QLG
Sbjct: 139 LFDGMEERDVVCWNVMIDGYAQHGMPNEALLLFRKMLVAKIKPNELTVLSLLSACGQLGA 198
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 199 LESGRWL 205
>ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFDEMP+RD+F N L++GY Q EA+ LF +MQ A + P++IT+V+ LSAC+QLG
Sbjct: 310 VFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGA 369
Query: 21 LSQGQWI 1
L G W+
Sbjct: 370 LEMGMWV 376
>gb|EYU34329.1| hypothetical protein MIMGU_mgv1a001967mg [Mimulus guttatus]
Length = 732
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+FDE P++ L N +ISGY Q+G AI LF EMQN ++PN +T+ S LSACAQLG
Sbjct: 315 LFDESPEKTLASWNAMISGYAQNGQTETAISLFHEMQNLNIQPNPVTVTSILSACAQLGA 374
Query: 21 LSQGQWI 1
L G+W+
Sbjct: 375 LGLGKWV 381
>ref|XP_004229576.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Solanum lycopersicum]
Length = 624
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
+F+ M DRD+ N +I GY+Q G P EA+ LF +M +K++PNE+T+V+ LSACAQ+G
Sbjct: 209 LFEGMEDRDVVCWNAMIDGYSQHGRPNEALVLFRKMLLSKVKPNEVTVVAALSACAQMGV 268
Query: 21 LSQGQWI 1
L G+WI
Sbjct: 269 LESGRWI 275
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = -3
Query: 201 VFDEMPDRDLFF*NGLISGYTQSGMPMEAICLF*EMQNAKLRPNEITLVSTLSACAQLGC 22
VFD+M D+D+ N +I GY G +EA+ LF EM L+P +IT + LSACA G
Sbjct: 310 VFDQMRDKDVITWNSMIVGYAMHGFSLEALQLFNEMCKLGLQPTDITFIGILSACANAGL 369
Query: 21 LSQG 10
LS+G
Sbjct: 370 LSEG 373