BLASTX nr result
ID: Cocculus23_contig00044776
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044776
(216 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006299010.1| hypothetical protein CARUB_v10015137mg [Caps... 49 3e-08
ref|XP_006300936.1| hypothetical protein CARUB_v10021315mg, part... 48 4e-08
ref|XP_006292287.1| hypothetical protein CARUB_v10018496mg [Caps... 49 8e-08
dbj|BAB02591.1| unnamed protein product [Arabidopsis thaliana] 47 1e-07
ref|XP_006299436.1| hypothetical protein CARUB_v10015600mg, part... 46 1e-07
ref|NP_189591.1| General transcription factor 2-related zinc fin... 47 1e-07
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ... 47 4e-07
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat... 47 4e-07
ref|NP_189621.1| General transcription factor 2-related zinc fin... 47 4e-07
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc... 43 6e-07
ref|XP_006600920.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_006589069.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_006581577.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_003553096.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_003545919.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_003535272.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_003535268.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_006601245.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_006583791.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
ref|XP_006576544.1| PREDICTED: zinc finger MYM-type protein 1-li... 41 8e-07
>ref|XP_006299010.1| hypothetical protein CARUB_v10015137mg [Capsella rubella]
gi|482567719|gb|EOA31908.1| hypothetical protein
CARUB_v10015137mg [Capsella rubella]
Length = 736
Score = 48.9 bits (115), Expect(2) = 3e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHEKKFLK 137
VAVAK HF V FF+ +S +LN +GASCKR D ++ ++KK ++
Sbjct: 350 VAVAKKHFNVGDFFDMISLLLNVVGASCKRKDMIRE-SYKKKIME 393
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 113 STRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
S +KKI+E + NG++ G GL Q +L RP +TR
Sbjct: 386 SYKKKIMEEINNGEISTGTGLNQEISLQRPANTR 419
>ref|XP_006300936.1| hypothetical protein CARUB_v10021315mg, partial [Capsella rubella]
gi|482569646|gb|EOA33834.1| hypothetical protein
CARUB_v10021315mg, partial [Capsella rubella]
Length = 684
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALK 107
VAVAK HF+V FF+ +S ++N +GASCKR D L+
Sbjct: 350 VAVAKKHFEVGYFFDMISVLINVVGASCKRKDMLR 384
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
RKKI E + G++ GKGL Q +L RPG+TR
Sbjct: 388 RKKIEEEISQGEIKTGKGLNQELSLQRPGNTR 419
>ref|XP_006292287.1| hypothetical protein CARUB_v10018496mg [Capsella rubella]
gi|482560994|gb|EOA25185.1| hypothetical protein
CARUB_v10018496mg [Capsella rubella]
Length = 418
Score = 48.5 bits (114), Expect(2) = 8e-08
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHEK 125
VA+AK HF+V FF+ +S ++N +GASCKR D ++ +K
Sbjct: 34 VAIAKKHFEVGDFFDMISTLVNVVGASCKRQDMIRETYRKK 74
Score = 33.5 bits (75), Expect(2) = 8e-08
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
RKK+ E + +G++ G GL Q +L RPG+TR
Sbjct: 72 RKKVQEGISSGEINTGTGLNQEISLQRPGNTR 103
>dbj|BAB02591.1| unnamed protein product [Arabidopsis thaliana]
Length = 571
Score = 47.0 bits (110), Expect(2) = 1e-07
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALK 107
VAVAK HF++ FF+ +S ++N +GASCKR D ++
Sbjct: 306 VAVAKKHFEIGDFFDMISVLINVVGASCKRKDRVR 340
Score = 34.3 bits (77), Expect(2) = 1e-07
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
RKK+ E + G++ GKGL Q +L RPG+TR
Sbjct: 344 RKKLEERINQGEIKTGKGLNQKLSLQRPGNTR 375
>ref|XP_006299436.1| hypothetical protein CARUB_v10015600mg, partial [Capsella rubella]
gi|482568145|gb|EOA32334.1| hypothetical protein
CARUB_v10015600mg, partial [Capsella rubella]
Length = 559
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALK 107
VAVAK HF+V FF+ + ++N +GASCKR D L+
Sbjct: 233 VAVAKKHFEVGDFFDMIYVLINVVGASCKRKDMLR 267
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
RKKI E + G++ GKGL Q +L RPG+TR
Sbjct: 271 RKKIEEEISQGEIKTGKGLNQELSLQRPGNTR 302
>ref|NP_189591.1| General transcription factor 2-related zinc finger protein
[Arabidopsis thaliana] gi|332644064|gb|AEE77585.1|
General transcription factor 2-related zinc finger
protein [Arabidopsis thaliana]
Length = 522
Score = 47.0 bits (110), Expect(2) = 1e-07
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALK 107
VAVAK HF++ FF+ +S ++N +GASCKR D ++
Sbjct: 257 VAVAKKHFEIGDFFDMISVLINVVGASCKRKDRVR 291
Score = 34.3 bits (77), Expect(2) = 1e-07
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
RKK+ E + G++ GKGL Q +L RPG+TR
Sbjct: 295 RKKLEERINQGEIKTGKGLNQKLSLQRPGNTR 326
>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
transposase from Ipomoea purpurea gb|4063769 and is a
member of the transmembrane 4 family PF|00335
[Arabidopsis thaliana]
Length = 811
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHEK 125
+AVAK H +V FF +S +LN +GASCKR D ++ I +K
Sbjct: 415 MAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIHRQK 455
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
R+K+ E + NG++ G GL Q +L RPG+TR
Sbjct: 453 RQKVEEKISNGEIKTGTGLNQELSLQRPGNTR 484
>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
[Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
TTF-type zinc finger protein with HAT dimerization
domain [Arabidopsis thaliana]
Length = 769
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHEK 125
+AVAK H +V FF +S +LN +GASCKR D ++ I +K
Sbjct: 373 MAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIHRQK 413
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
R+K+ E + NG++ G GL Q +L RPG+TR
Sbjct: 411 RQKVEEKISNGEIKTGTGLNQELSLQRPGNTR 442
>ref|NP_189621.1| General transcription factor 2-related zinc finger protein
[Arabidopsis thaliana] gi|332644086|gb|AEE77607.1|
General transcription factor 2-related zinc finger
protein [Arabidopsis thaliana]
Length = 536
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHEK 125
+AVAK H +V FF +S +LN +GASCKR D ++ I +K
Sbjct: 140 MAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIDRQK 180
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
R+K+ E + NG++ G GL Q +L RPG+TR
Sbjct: 178 RQKVEEKISNGEIKTGTGLNQELSLQRPGNTR 209
>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
[Medicago truncatula]
Length = 892
Score = 43.1 bits (100), Expect(2) = 6e-07
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALK 107
+A+A++H QV S F +S + N +G SCKR+D L+
Sbjct: 494 IAIARDHLQVNSLFSVISTLTNVVGGSCKRTDMLR 528
Score = 35.8 bits (81), Expect(2) = 6e-07
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 119 RKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
R ++ EAL+NG+++ G+GL Q N+ R DTR
Sbjct: 532 RIRVKEALENGEIVSGRGLNQEPNMKRSADTR 563
>ref|XP_006600920.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_006589069.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_006581577.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_003553096.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_003545919.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_003535272.1| PREDICTED: zinc finger MYM-type protein 1-like isoform X1 [Glycine
max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_003535268.1| PREDICTED: zinc finger MYM-type protein 1-like isoform X1 [Glycine
max]
Length = 790
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 391 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 430
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 425 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 460
>ref|XP_006601245.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 789
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 390 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 429
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 424 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 459
>ref|XP_006583791.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 789
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 390 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 429
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 424 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 459
>ref|XP_006576544.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
Length = 789
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 3 VAVAKNHFQVKSFFEFVSRILNTIGASCKRSDALKVIQHE 122
V+V + + FFE+++ I+NT ASCKR DAL QH+
Sbjct: 390 VSVTSSCSSIHDFFEYITLIVNTTSASCKRRDALTEAQHK 429
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 107 SHSTRKKILEALQNGDLIKGKGLIQAANL*RPGDTR 214
+ + K IL L++G++ +G+GL Q+++L RPGDTR
Sbjct: 424 TEAQHKDILNKLESGEISRGRGLHQSSSLTRPGDTR 459