BLASTX nr result

ID: Cocculus23_contig00044517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00044517
         (224 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006848793.1| hypothetical protein AMTR_s00026p00111580 [A...    70   3e-10
ref|XP_006341378.1| PREDICTED: F-box/LRR-repeat protein 3-like [...    70   4e-10
ref|XP_004235919.1| PREDICTED: F-box/LRR-repeat protein 2-like [...    66   4e-09
ref|XP_004158826.1| PREDICTED: F-box/LRR-repeat protein 4-like [...    65   1e-08
gb|EXB67217.1| F-box/LRR-repeat protein 20 [Morus notabilis]           63   5e-08
ref|XP_007023370.1| RNI-like superfamily protein, putative [Theo...    62   6e-08
ref|XP_003604291.1| F-box/LRR-repeat protein [Medicago truncatul...    61   1e-07
ref|XP_003533085.2| PREDICTED: F-box/LRR-repeat protein 2-like [...    61   2e-07
ref|XP_007023366.1| Uncharacterized protein TCM_027376 [Theobrom...    60   2e-07
ref|XP_007215517.1| hypothetical protein PRUPE_ppa003687mg [Prun...    60   4e-07
ref|XP_002527327.1| F-box/LRR-repeat protein, putative [Ricinus ...    57   3e-06

>ref|XP_006848793.1| hypothetical protein AMTR_s00026p00111580 [Amborella trichopoda]
           gi|548852226|gb|ERN10374.1| hypothetical protein
           AMTR_s00026p00111580 [Amborella trichopoda]
          Length = 561

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = -2

Query: 202 RHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFNGDID 23
           R FESVS+VC+RFLSISNRLR  F++  P   +   +SR L+RF  L+RIDL  F  + D
Sbjct: 25  RQFESVSVVCRRFLSISNRLRVNFTIREPLPSLSGGLSRLLRRFRDLRRIDLSEFVANPD 84

Query: 22  SVIREIA 2
            V+REI+
Sbjct: 85  QVLREIS 91


>ref|XP_006341378.1| PREDICTED: F-box/LRR-repeat protein 3-like [Solanum tuberosum]
          Length = 582

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = -2

Query: 220 NRLDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVG 41
           +RL H    ES S+V K+FL+++NRLR   SV + T++ H TIS+ + RF  LK IDL  
Sbjct: 18  SRLHHKSDLESFSMVSKQFLALTNRLRIGLSVIDSTLLTHGTISKLIHRFPNLKSIDLSN 77

Query: 40  FNGDIDSVIREIA 2
           F+GD+D V+ ++A
Sbjct: 78  FSGDLDPVLVDLA 90


>ref|XP_004235919.1| PREDICTED: F-box/LRR-repeat protein 2-like [Solanum lycopersicum]
          Length = 569

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/73 (43%), Positives = 49/73 (67%)
 Frame = -2

Query: 220 NRLDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVG 41
           +RL H    ES S+V K+FL+++NRLR   +V + T++ H  IS+ + RF  LK IDL  
Sbjct: 18  SRLHHKSDLESFSVVSKQFLALTNRLRIGLTVIDSTLLTHGNISKLIHRFPNLKSIDLSN 77

Query: 40  FNGDIDSVIREIA 2
           F+GD+D V+ ++A
Sbjct: 78  FSGDLDPVLVDLA 90


>ref|XP_004158826.1| PREDICTED: F-box/LRR-repeat protein 4-like [Cucumis sativus]
          Length = 587

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = -2

Query: 208 HHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFNGD 29
           H  HFES+SLVCK+F SI+N+LR    ++N TI     I R   RF  LKRIDL  FNG 
Sbjct: 25  HTHHFESLSLVCKQFFSITNKLRTTLRISNLTI---PAIPRIYSRFLNLKRIDLSHFNGL 81

Query: 28  IDSVIREIA 2
           +D ++  IA
Sbjct: 82  LDGLLLGIA 90


>gb|EXB67217.1| F-box/LRR-repeat protein 20 [Morus notabilis]
          Length = 1036

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/73 (42%), Positives = 49/73 (67%)
 Frame = -2

Query: 220 NRLDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVG 41
           N +DH   F S+SLVCK+FLSI+N L    +V +PT+ +   +   ++RF +L++IDL G
Sbjct: 13  NFVDHRHRFSSLSLVCKQFLSITNDLVTALAVLDPTLPL---LPDLVRRFPKLRKIDLSG 69

Query: 40  FNGDIDSVIREIA 2
             GDID ++ ++A
Sbjct: 70  LRGDIDGILSQLA 82


>ref|XP_007023370.1| RNI-like superfamily protein, putative [Theobroma cacao]
           gi|508778736|gb|EOY25992.1| RNI-like superfamily
           protein, putative [Theobroma cacao]
          Length = 572

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/71 (43%), Positives = 47/71 (66%)
 Frame = -2

Query: 214 LDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFN 35
           L HHR+FE +SLVC  FLSI+N LR+  ++T+ T+    ++ R L+RF  L  I    F+
Sbjct: 15  LQHHRYFEPLSLVCNMFLSITNHLRHTLTITDATL---ESLPRLLRRFPNLHTIIFRDFH 71

Query: 34  GDIDSVIREIA 2
           G +DSV+ +I+
Sbjct: 72  GSLDSVLSQIS 82


>ref|XP_003604291.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355505346|gb|AES86488.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 538

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/71 (39%), Positives = 49/71 (69%)
 Frame = -2

Query: 214 LDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFN 35
           L   +  ESVS+VCK+FLSI+N++++  ++ + TI+    +SR L RF +LK ID   FN
Sbjct: 18  LGQGKDLESVSMVCKKFLSITNQVKFSLTIHDSTILF---LSRLLSRFLRLKAIDFSHFN 74

Query: 34  GDIDSVIREIA 2
           G+++ ++ +I+
Sbjct: 75  GELEDILHQIS 85


>ref|XP_003533085.2| PREDICTED: F-box/LRR-repeat protein 2-like [Glycine max]
          Length = 560

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 49/71 (69%)
 Frame = -2

Query: 214 LDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFN 35
           + H RH ES+SLVCK+FLSI+NRL++  ++ +PTI +   + R L RF +L+ +DL   N
Sbjct: 19  IGHGRHLESLSLVCKQFLSITNRLQFSLTIHDPTIPV---LPRLLLRFPRLRILDLSHLN 75

Query: 34  GDIDSVIREIA 2
              + ++R+I+
Sbjct: 76  SHHEGLLRQIS 86


>ref|XP_007023366.1| Uncharacterized protein TCM_027376 [Theobroma cacao]
           gi|508778732|gb|EOY25988.1| Uncharacterized protein
           TCM_027376 [Theobroma cacao]
          Length = 119

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = -2

Query: 214 LDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFN 35
           L HHR+ E +SLVC  FLSI+N LR+  ++T+PT+    ++ R L+RF  L  I     +
Sbjct: 15  LQHHRYVEPLSLVCNMFLSITNHLRHTLTITDPTL---ESLPRLLRRFPNLHTIIFRDIH 71

Query: 34  GDIDSVIREIA 2
           G +DSV+ +I+
Sbjct: 72  GSLDSVLSQIS 82


>ref|XP_007215517.1| hypothetical protein PRUPE_ppa003687mg [Prunus persica]
           gi|462411667|gb|EMJ16716.1| hypothetical protein
           PRUPE_ppa003687mg [Prunus persica]
          Length = 556

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/64 (45%), Positives = 43/64 (67%)
 Frame = -2

Query: 214 LDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLVGFN 35
           LDH  HF S+S VCK+FLSI+NRL     +++PT  +   + R LQRF ++K+I+L GF 
Sbjct: 20  LDHPSHFNSLSQVCKQFLSITNRLLLSLKLSDPT--VQALLPRLLQRFRRIKQIELTGFQ 77

Query: 34  GDID 23
             ++
Sbjct: 78  ESLN 81


>ref|XP_002527327.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223533327|gb|EEF35079.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 578

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -2

Query: 223 LNRLDHHRHFESVSLVCKRFLSISNRLRYRFSVTNPTIVIHRTISRFLQRFFQLKRIDLV 44
           LN LDHHRHFES+SLV  RF S++N LR   ++++ T+     +S  L RF  LK I + 
Sbjct: 17  LNSLDHHRHFESLSLVSTRFFSMTNHLRQNLTISSHTLPF---LSHLLNRFPNLKSIQIS 73

Query: 43  GFN-GDIDSVIREIA 2
             +  D++S++ +++
Sbjct: 74  QLSKDDLNSLLHQLS 88


Top