BLASTX nr result

ID: Cocculus23_contig00044433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00044433
         (521 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194250.1| small heat shock protein 23.6 [Arabidopsis thal...    57   4e-06
ref|XP_007209602.1| hypothetical protein PRUPE_ppa011466mg [Prun...    55   8e-06

>ref|NP_194250.1| small heat shock protein 23.6 [Arabidopsis thaliana]
           gi|3122232|sp|Q96331.1|HS23M_ARATH RecName: Full=23.6
           kDa heat shock protein, mitochondrial; Short=AtHsp23.6;
           Flags: Precursor gi|1669866|gb|AAB38795.1|
           AtHSP23.6-mito [Arabidopsis thaliana]
           gi|4454008|emb|CAA23061.1| Arabidopsis
           mitochondrion-localized small heat shock protein
           (AtHSP23.6-mito) [Arabidopsis thaliana]
           gi|7269370|emb|CAB79429.1| Arabidopsis
           mitochondrion-localized small heat shock protein
           (AtHSP23.6-mito) [Arabidopsis thaliana]
           gi|26453231|dbj|BAC43689.1| putative
           mitochondrion-localized small heat shock protein
           [Arabidopsis thaliana] gi|28950739|gb|AAO63293.1|
           At4g25200 [Arabidopsis thaliana]
           gi|222424012|dbj|BAH19967.1| AT4G25200 [Arabidopsis
           thaliana] gi|332659624|gb|AEE85024.1| small heat shock
           protein 23.6 [Arabidopsis thaliana]
          Length = 210

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
 Frame = +3

Query: 138 MASSFALRRAFAISSTLFTKLCHRPIRPLITSRAFSTNIGELDLKDGLKGDHV------- 296
           MAS+ AL+R   +SS++  +     +RP ++SR F+TN       DG  GD V       
Sbjct: 1   MASALALKRL--LSSSIAPR-SRSVLRPAVSSRLFNTNAVRSYDDDGENGDGVDLYRRSV 57

Query: 297 -------FTD----------------------KNPFKREAKGTNSPRFSNGLQVTEDESG 389
                  F+D                      +NP     +G  +     G  + E +  
Sbjct: 58  PRRRGDFFSDVFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDA 117

Query: 390 VYLKLDKPGLSKENVKVFVNLEENALRIRVDGA-EEDQEEEGSDG 521
           +YL++D PGLS+E+VK  + LE++ L IR +G  EED  EEG  G
Sbjct: 118 LYLRIDMPGLSREDVK--LALEQDTLVIRGEGKNEEDGGEEGESG 160


>ref|XP_007209602.1| hypothetical protein PRUPE_ppa011466mg [Prunus persica]
           gi|462405337|gb|EMJ10801.1| hypothetical protein
           PRUPE_ppa011466mg [Prunus persica]
          Length = 209

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
 Frame = +3

Query: 138 MASSFALRRAFAISSTLFTKLCHRPIR-----PLITSRAFSTN--IGELDLKDG-LKGDH 293
           MASS ++    A + TLF+KL   PIR     PL+ SR+F++N  +   D  D  +  D 
Sbjct: 1   MASSVSILLRRASAPTLFSKLSS-PIRSASVSPLV-SRSFNSNAQVTSYDQDDRRVPVDR 58

Query: 294 VFTDKNPFKREAKG---------------------------TNSPRFSN---GLQVTEDE 383
             TD++PF+R   G                           T++P F+    G  V E+E
Sbjct: 59  STTDRSPFRRRDLGPTFFSDVFDPFSPTRSLSQVLNMMDQITDNPFFAGSRRGWDVKENE 118

Query: 384 SGVYLKLDKPGLSKENVKVFVNLEENALRIRVDGAEEDQEEEGSDG 521
             ++L++D PGL KE+VK  +++E+N L ++  G ++D E+E   G
Sbjct: 119 EALFLRMDMPGLDKEDVK--ISVEQNTLVVK--GEDKDSEDEEGGG 160


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