BLASTX nr result
ID: Cocculus23_contig00044343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044343
(303 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 102 4e-20
ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608... 99 6e-19
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 99 6e-19
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 98 1e-18
emb|CAN73795.1| hypothetical protein VITISV_036649 [Vitis vinifera] 96 5e-18
emb|CAN75273.1| hypothetical protein VITISV_043734 [Vitis vinifera] 96 5e-18
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 94 2e-17
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 93 3e-17
emb|CAN78241.1| hypothetical protein VITISV_011536 [Vitis vinifera] 90 3e-16
emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera] 87 3e-15
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 87 3e-15
gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thali... 86 5e-15
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 86 5e-15
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 86 7e-15
emb|CAN73151.1| hypothetical protein VITISV_029990 [Vitis vinifera] 85 9e-15
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 85 1e-14
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 85 1e-14
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 84 2e-14
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 84 2e-14
emb|CAN78448.1| hypothetical protein VITISV_026811 [Vitis vinifera] 84 2e-14
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 102 bits (255), Expect = 4e-20
Identities = 49/83 (59%), Positives = 58/83 (69%)
Frame = -1
Query: 255 GHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKT 76
GHPMITRSK GI K K Y +++ IEP+TV +AL PNWK AME EYQALL N+T
Sbjct: 774 GHPMITRSKSGICKKKTYLTSL------TIEPRTVKQALQDPNWKVAMEQEYQALLKNQT 827
Query: 75 WMLVPPSPTQNLVGNKWVFKVKH 7
W LVPP ++G KWVFK+KH
Sbjct: 828 WSLVPPPSNAKIIGCKWVFKLKH 850
>ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608996 [Citrus sinensis]
Length = 1923
Score = 99.0 bits (245), Expect = 6e-19
Identities = 49/98 (50%), Positives = 64/98 (65%)
Frame = -1
Query: 294 VQLSAPLYHSTQIGHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSA 115
+Q + P HS HPMITR+K GIFKPK + ++ ++EP TV EALS P WK+A
Sbjct: 651 IQSTQPSQHSLP-NHPMITRAKAGIFKPKAFLTS-----HNSLEPSTVDEALSDPKWKAA 704
Query: 114 MEAEYQALLTNKTWMLVPPSPTQNLVGNKWVFKVKHNT 1
M++E+ AL N TW LVP + LVG KWVF+ K+NT
Sbjct: 705 MQSEFDALTRNNTWTLVPVTSQHKLVGCKWVFRTKYNT 742
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 99.0 bits (245), Expect = 6e-19
Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Frame = -1
Query: 297 SVQLSAPLYHSTQIGHPMITRSKPGIFKPKVYSSTIDDGLS---QNIEPKTVAEALSSPN 127
S+ LSA H+ HPMITR+K GIFKPKVY++ + LS +IEP V + L+ PN
Sbjct: 233 SMSLSA---HAPAPCHPMITRAKAGIFKPKVYAA-LKHPLSFSLGSIEPMCVKQVLADPN 288
Query: 126 WKSAMEAEYQALLTNKTWMLVPPSPTQNLVGNKWVFKVK 10
WK AM+ EY+AL+ N TW LVP P N+VGNKWVFK+K
Sbjct: 289 WKIAMKEEYKALMRNDTWDLVPYQPQYNVVGNKWVFKLK 327
>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/83 (56%), Positives = 56/83 (67%)
Frame = -1
Query: 255 GHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKT 76
GHPMITRSK GI K K Y +++ IEP+TV + L PNWK AME EYQALL N+T
Sbjct: 520 GHPMITRSKSGICKKKTYLTSL------TIEPRTVKQTLQDPNWKLAMEQEYQALLKNQT 573
Query: 75 WMLVPPSPTQNLVGNKWVFKVKH 7
W LVPP ++ KWVFK+KH
Sbjct: 574 WSLVPPPSNAKIIRCKWVFKLKH 596
>emb|CAN73795.1| hypothetical protein VITISV_036649 [Vitis vinifera]
Length = 828
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/82 (57%), Positives = 55/82 (67%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTW 73
HPMITRSK GI K K Y +++ EP TV +AL PNWK AME EYQALL N+TW
Sbjct: 390 HPMITRSKSGICKKKTYLTSLI------AEPHTVKQALQDPNWKLAMEXEYQALLKNQTW 443
Query: 72 MLVPPSPTQNLVGNKWVFKVKH 7
LVPP ++G KWVFK+KH
Sbjct: 444 SLVPPPSNVKIIGCKWVFKLKH 465
>emb|CAN75273.1| hypothetical protein VITISV_043734 [Vitis vinifera]
Length = 1254
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGL--SQNIEPKTVAEALSSPNWKSAMEAEYQALLTNK 79
HPM+TRSK GI+KPK+++ + S EP ++ +ALS PNWK AM+AE+QAL N
Sbjct: 62 HPMVTRSKAGIYKPKLFNVLKHPLIVFSALAEPLSIKQALSDPNWKKAMDAEFQALKNND 121
Query: 78 TWMLVPPSPTQNLVGNKWVFKVKHN 4
TW LVP N+VGNKWVFK+K+N
Sbjct: 122 TWDLVPYKSKYNVVGNKWVFKLKYN 146
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 94.0 bits (232), Expect = 2e-17
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTW 73
HPM TR+K GIFKPK++ S EP + EA+ P W+ AM E++AL++NKTW
Sbjct: 728 HPMTTRAKNGIFKPKIFLSPTKTIFHPLCEPNSFKEAVKVPEWQQAMHLEFEALMSNKTW 787
Query: 72 MLVPPSPTQNLVGNKWVFKVKH 7
+LVPP P QN++G WV+K+K+
Sbjct: 788 VLVPPPPNQNIIGCHWVYKLKY 809
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = -1
Query: 258 IGHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNK 79
IGHPMITRSK GIFKPK + + + L+ EP +V+ ALS P W AM+ E+QAL N
Sbjct: 295 IGHPMITRSKAGIFKPKSFLAAL---LAIPSEPTSVSAALSDPKWFKAMQEEFQALQNNH 351
Query: 78 TWMLVPPSPTQNLVGNKWVFKVKHN 4
TW LV PS +VGNKW+FK+K++
Sbjct: 352 TWDLVLPSEPIKVVGNKWIFKIKYH 376
>emb|CAN78241.1| hypothetical protein VITISV_011536 [Vitis vinifera]
Length = 280
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = -1
Query: 285 SAPLYHSTQI--GHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAM 112
+ PL ST GHPMITRSK GI K Y +++ +P + +AL PNWK M
Sbjct: 177 TTPLQDSTTPIPGHPMITRSKFGICKKNTYLTSLI------AKPCAIKQALQDPNWKLVM 230
Query: 111 EAEYQALLTNKTWMLVPPSPTQNLVGNKWVFKVKH 7
E EYQALL N+TW LVPP ++G KWVFK+KH
Sbjct: 231 EQEYQALLKNQTWSLVPPPSNAKIIGCKWVFKLKH 265
>emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]
Length = 1124
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTW 73
H M+TRSK GIFKPKVY TID + EP T E +S P WK AM+ E++AL+ NKTW
Sbjct: 475 HHMVTRSKNGIFKPKVY--TIDLNVE---EPNTFQETISHPKWKEAMDEEFRALMKNKTW 529
Query: 72 MLVPPSPTQNLVGNKWVFKVKHN 4
LV + VG KWVFK+K N
Sbjct: 530 SLVSLPSNRTSVGCKWVFKLKRN 552
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/83 (53%), Positives = 55/83 (66%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTW 73
H M+TRSK GIFKPKVY T+D + EP T EA+S P WK AM+ E++AL+ NKTW
Sbjct: 513 HHMVTRSKNGIFKPKVY--TVDLNVE---EPNTFQEAISHPKWKEAMDEEFRALMKNKTW 567
Query: 72 MLVPPSPTQNLVGNKWVFKVKHN 4
LV + VG +WVFK+K N
Sbjct: 568 SLVSLPTNRTSVGCRWVFKLKRN 590
>gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thaliana]
Length = 559
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/92 (46%), Positives = 55/92 (59%)
Frame = -1
Query: 279 PLYHSTQIGHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEY 100
P +TQ HPM+TRSK GI KP + + +N EPKTV EAL P W +AM EY
Sbjct: 120 PAAPATQSTHPMVTRSKKGIIKPNPRYGLLTHKV-KNAEPKTVTEALKHPGWTAAMHEEY 178
Query: 99 QALLTNKTWMLVPPSPTQNLVGNKWVFKVKHN 4
+TW LVP +P N++G+KWVF+ K N
Sbjct: 179 DNCQEAQTWSLVPYTPDMNVLGSKWVFQTKLN 210
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGLSQNIEPK-----TVAEALSSPNWKSAMEAEYQALL 88
HPM TRSK G KPK+ I LS ++ P TV++AL +PNW + M EYQAL+
Sbjct: 458 HPMTTRSKVGTIKPKLLPDHITY-LSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQALV 516
Query: 87 TNKTWMLVPPSPTQNLVGNKWVFKVKHNT 1
N TW LVP P+ N++ +KW+F+VK+N+
Sbjct: 517 RNNTWTLVPFHPSMNVIDSKWIFRVKYNS 545
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 85.5 bits (210), Expect = 7e-15
Identities = 49/94 (52%), Positives = 55/94 (58%)
Frame = -1
Query: 285 SAPLYHSTQIGHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEA 106
SAP + S H MITRSK GIFKPK Y + P +V EAL +WK AM
Sbjct: 854 SAPPFPS----HHMITRSKXGIFKPKAYLISTT--------PTSVPEALQLSHWKQAMTD 901
Query: 105 EYQALLTNKTWMLVPPSPTQNLVGNKWVFKVKHN 4
EY ALL N TW LVPP + L+G KWVFKVK N
Sbjct: 902 EYLALLRNNTWDLVPPPTDRKLIGCKWVFKVKEN 935
>emb|CAN73151.1| hypothetical protein VITISV_029990 [Vitis vinifera]
Length = 437
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/96 (45%), Positives = 59/96 (61%)
Frame = -1
Query: 288 LSAPLYHSTQIGHPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAME 109
+S L H++ H M TRSK GI+KPKVY+ T+ L EP +V +AL P+WK AME
Sbjct: 144 MSQSLLHTSTNIHSMQTRSKSGIYKPKVYT-TVVALLDHFQEPSSVQQALQLPHWKMAME 202
Query: 108 AEYQALLTNKTWMLVPPSPTQNLVGNKWVFKVKHNT 1
+Y L+ N TW LVP ++V NKW+FK + T
Sbjct: 203 VKYSTLVRNGTWQLVPKIEGMHIVQNKWIFKTELKT 238
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Frame = -1
Query: 240 TRSKPGIFKPKVYSS---TIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTWM 70
TR + GI KPK ++ + ++ EP +V+EAL+ P W++AMEAE+QAL N TW
Sbjct: 896 TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955
Query: 69 LVPPSPTQNLVGNKWVFKVKHN 4
LVPP T+NL+ KWVFKVK+N
Sbjct: 956 LVPPDRTRNLIDCKWVFKVKYN 977
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = -1
Query: 261 QIGHPMITRSKPGIFKPKVYSS-TIDDG-LSQNIEPKTVAEALSSPNWKSAMEAEYQALL 88
QI +TRS+ G+ +PK Y+ T+ G L++ EP ++ EALSS NWK AM+ E+ ALL
Sbjct: 349 QIQQRPVTRSQHGVHRPKKYTDGTVRYGCLTETGEPSSLQEALSSANWKQAMDKEFSALL 408
Query: 87 TNKTWMLVPPSPTQNLVGNKWVFKVK 10
NKTW LVPP +N++ +KWV+K+K
Sbjct: 409 HNKTWHLVPPVKGKNIIDSKWVYKIK 434
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Frame = -1
Query: 279 PLYHSTQIGHPMITRSKPGIFKPKVYSSTIDDGLSQ--NIEPKTVAEALSSPNWKSAMEA 106
P +H+T H M TR+K I KP + + LS+ ++EP T +AL P W+ AM
Sbjct: 616 PDHHTTNSNHSMQTRAKNNIRKP-IQKLNLHIQLSKPLDLEPTTPTQALKDPKWRKAMSE 674
Query: 105 EYQALLTNKTWMLVPPSPTQNLVGNKWVFKVKHNT 1
EY AL+ N TW LVP +P+QN+VG KW+F+ K N+
Sbjct: 675 EYDALVRNGTWELVPSNPSQNVVGCKWIFRTKRNS 709
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = -1
Query: 252 HPMITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTW 73
H M+TRSK GIFKP VY T+D + EP T EA+S P WK AM+ E++AL+ NKTW
Sbjct: 722 HHMVTRSKNGIFKPXVY--TVDLNVE---EPNTFQEAISHPKWKEAMDEEFRALMKNKTW 776
Query: 72 MLVPPSPTQNLVGNKWVFKVKHN 4
LV + VG +WVFK+K N
Sbjct: 777 SLVSLPTNRTSVGCRWVFKLKRN 799
>emb|CAN78448.1| hypothetical protein VITISV_026811 [Vitis vinifera]
Length = 447
Score = 84.3 bits (207), Expect = 2e-14
Identities = 44/81 (54%), Positives = 53/81 (65%)
Frame = -1
Query: 246 MITRSKPGIFKPKVYSSTIDDGLSQNIEPKTVAEALSSPNWKSAMEAEYQALLTNKTWML 67
M+TRSK GIFKPKVY T+D + EP T EA+S P WK AM E++AL+ NKTW L
Sbjct: 1 MVTRSKNGIFKPKVY--TVDLNVE---EPNTFQEAISHPKWKEAMNEEFRALMKNKTWSL 55
Query: 66 VPPSPTQNLVGNKWVFKVKHN 4
V + VG KWVFK+K N
Sbjct: 56 VSFPTNRTSVGCKWVFKLKRN 76