BLASTX nr result
ID: Cocculus23_contig00044326
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044326
(227 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera] 73 5e-11
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 72 6e-11
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera] 72 6e-11
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 71 1e-10
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 71 2e-10
emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera] 69 5e-10
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 68 1e-09
emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera] 67 2e-09
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 66 6e-09
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 65 8e-09
gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-... 65 8e-09
emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera] 65 1e-08
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 65 1e-08
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 64 2e-08
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 64 2e-08
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 64 2e-08
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 64 2e-08
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 64 3e-08
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 63 5e-08
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 62 6e-08
>emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
Length = 893
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/75 (48%), Positives = 45/75 (60%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXX 46
GQTEV LK W++CLPFIEFAYNR++HSTT++SPF+IVYGFN
Sbjct: 106 GQTEVVNRTLSILLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTNFSPFKIVYGFNPLTP 165
Query: 45 XXXXXXLVDKRVSLD 1
V++ SLD
Sbjct: 166 LDLLPLPVNEMTSLD 180
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/75 (46%), Positives = 42/75 (56%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXX 46
GQTEV LK W+ECLP +EFAYNR +HS T +SPFEIVYGFN
Sbjct: 290 GQTEVVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVYGFNPLTP 349
Query: 45 XXXXXXLVDKRVSLD 1
+D+R S+D
Sbjct: 350 LDLLPLPIDERASMD 364
>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
Length = 771
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CLPFIEFAYNR+IHSTT++SPFEIVYGFN LV++ SLD
Sbjct: 564 KNWEDCLPFIEFAYNRSIHSTTNFSPFEIVYGFNPLTPLDLLPLLVNEMTSLD 616
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CLPF EFAYNR++HSTTS+SPFEIVYGFN V++ SLD
Sbjct: 978 KNWEDCLPFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLD 1030
>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
Length = 1124
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXX 46
GQTEV LK W+ CLPFIEFAYN+++HSTT++SPFEIV+GFN
Sbjct: 904 GQTEVVNRTLSTLLRTIIQKNLKNWENCLPFIEFAYNQSVHSTTNFSPFEIVHGFNPLTP 963
Query: 45 XXXXXXLVDKRVSLD 1
+++ +SLD
Sbjct: 964 LDLLPLPINEMISLD 978
>emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]
Length = 1089
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CLPFIEF+YNR++HSTT++SPF+IVYGFN V++ SLD
Sbjct: 872 KNWEDCLPFIEFSYNRSVHSTTNFSPFKIVYGFNPLTPLDLLLLPVNEMTSLD 924
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CLPFIEFAYNR+IHSTT++SPF IVYGFN ++ SLD
Sbjct: 1087 KNWEDCLPFIEFAYNRSIHSTTNFSPFXIVYGFNPLTLLDLLPLPFNEMTSLD 1139
>emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera]
Length = 519
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CL FIEFAYNR++HSTT++SPF+IVYGFN V++ SLD
Sbjct: 283 KNWEDCLXFIEFAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLD 335
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFN 58
GQTEV LK W+ CLP +EFAYNRA+HSTT+ SPFEIVYGFN
Sbjct: 961 GQTEVVNRTLGTLLRTVLKKNLKSWEACLPHVEFAYNRAVHSTTNCSPFEIVYGFN 1016
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 65.5 bits (158), Expect = 8e-09
Identities = 32/75 (42%), Positives = 42/75 (56%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXX 46
GQTEV LK W++CLP +EFAYN ++HS + +SPF+IVYGFN
Sbjct: 1555 GQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTP 1614
Query: 45 XXXXXXLVDKRVSLD 1
+ +RVSLD
Sbjct: 1615 LDLMPLPLSERVSLD 1629
>gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1223
Score = 65.5 bits (158), Expect = 8e-09
Identities = 34/75 (45%), Positives = 39/75 (52%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXX 46
GQTEV LK W+ECLP +EFAYNRA HSTT SPF++VYGFN
Sbjct: 912 GQTEVVNCTLGTMLRAILKKNLKMWEECLPHVEFAYNRATHSTTKVSPFQVVYGFNPRAP 971
Query: 45 XXXXXXLVDKRVSLD 1
+RV D
Sbjct: 972 IDILPLPTSERVHND 986
>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
Length = 750
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CL FIEFAYNR++HS T+ SPFEIVYGFN V++ SLD
Sbjct: 514 KNWEDCLSFIEFAYNRSVHSITNSSPFEIVYGFNPLTPLDLLPLQVNEMTSLD 566
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFN 58
GQTEV LK W+E LP++EFAYNRAIHSTT+ SPFE+ YGFN
Sbjct: 1087 GQTEVVNRTLTQLLRVVIRKNLKSWEESLPYVEFAYNRAIHSTTNMSPFEVAYGFN 1142
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFN 58
GQTEV LK W+ CLP +EFAYNR +HSTT+ SPFEIVYGFN
Sbjct: 420 GQTEVVNKTLGTLLRTVLKKNLKSWEACLPHVEFAYNRTVHSTTNCSPFEIVYGFN 475
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGF 61
GQTEV LK W+ECLP +EFAYNRA+HSTT+ PFE+VYGF
Sbjct: 1367 GQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGF 1421
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGF 61
GQTEV LK W+ECLP +EFAYNRA+HSTT+ PFE+VYGF
Sbjct: 335 GQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGF 389
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGF 61
GQTEV LK W+ECLP +EFAYNRA+HSTT+ PFE+VYGF
Sbjct: 335 GQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGF 389
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -3
Query: 159 KRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFNXXXXXXXXXXLVDKRVSLD 1
K W++CLP +EFAYNR +HSTT SPFE+VYGFN + +R +++
Sbjct: 988 KEWEDCLPHVEFAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANME 1040
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGF 61
GQTEV K W+ECLP IEFAYNR++HSTT PFEIVYGF
Sbjct: 1408 GQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGF 1462
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = -3
Query: 225 GQTEVGXXXXXXXXXXXXXXXLKRWKECLPFIEFAYNRAIHSTTSYSPFEIVYGFN 58
GQTEV LK W++CLP +EFAYN ++HS T +SPF+IVYGFN
Sbjct: 930 GQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSVHSATKFSPFQIVYGFN 985