BLASTX nr result
ID: Cocculus23_contig00044311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044311
(417 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17
emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera] 92 1e-16
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat... 65 1e-08
ref|XP_006427322.1| hypothetical protein CICLE_v10025000mg [Citr... 65 1e-08
gb|EMT07476.1| hypothetical protein F775_15307 [Aegilops tauschii] 65 1e-08
ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein... 62 6e-08
gb|EMT07478.1| hypothetical protein F775_00276 [Aegilops tauschii] 62 6e-08
ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat... 61 2e-07
ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat... 61 2e-07
ref|XP_004236458.1| PREDICTED: putative pentatricopeptide repeat... 61 2e-07
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
ref|XP_002314110.1| pentatricopeptide repeat-containing family p... 61 2e-07
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EXB63808.1| hypothetical protein L484_021080 [Morus notabilis] 59 5e-07
ref|XP_006470592.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_006446101.1| hypothetical protein CICLE_v10017659mg [Citr... 59 5e-07
ref|XP_006392246.1| hypothetical protein EUTSA_v10023355mg [Eutr... 59 5e-07
ref|XP_007207628.1| hypothetical protein PRUPE_ppa020734mg [Prun... 59 5e-07
>ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
YM+LLSLYR+A RWD+ GCRK PGCSLIEV G+CYEF+VGDKS+P E+
Sbjct: 427 YMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSHPCAVEI 486
Query: 183 CLRLALLVAEIKE 221
CL L+ + E +E
Sbjct: 487 CLNLSKAIREFQE 499
>emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 91.7 bits (226), Expect = 1e-16
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
YM+LLSLYR+A RWD+ GCRK PGCSLIEV G+CYEF+VGDKS+P E+
Sbjct: 426 YMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSHPCAVEI 485
Query: 183 CLRLALLVAEIKE 221
CL L+ E KE
Sbjct: 486 CLNLSKANMEFKE 498
>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Citrus sinensis]
Length = 741
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y RWD+ G +K PGCS+IE+NGV +EF+ GDKS+P E+
Sbjct: 575 YVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEI 634
Query: 183 CLRLALLVAEIK 218
L+L + +++K
Sbjct: 635 YLKLDEMTSDLK 646
>ref|XP_006427322.1| hypothetical protein CICLE_v10025000mg [Citrus clementina]
gi|557529312|gb|ESR40562.1| hypothetical protein
CICLE_v10025000mg [Citrus clementina]
Length = 728
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y RWD+ G +K PGCS+IE+NGV +EF+ GDKS+P E+
Sbjct: 575 YVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEI 634
Query: 183 CLRLALLVAEIK 218
L+L + +++K
Sbjct: 635 YLQLDEMTSDLK 646
>gb|EMT07476.1| hypothetical protein F775_15307 [Aegilops tauschii]
Length = 696
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L +LY + RW D G +K PGCSLIE+NG +EF+ GD+S+P E+
Sbjct: 530 YVLLSNLYAKSNRWGDVRWLRQLMMEKGIKKEPGCSLIEMNGTIHEFVAGDRSHPMSEEI 589
Query: 183 CLRLALLVAEIKED 224
+L +L+ ++K D
Sbjct: 590 YSKLDMLLMDLKND 603
>ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508778643|gb|EOY25899.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 723
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y RWD G +K PGCSLIE+NGV +EF+ GD+S+P E+
Sbjct: 557 YVMLCNIYASCKRWDSLHDLRESMMHRGIKKTPGCSLIEMNGVVHEFVAGDQSHPQSKEI 616
Query: 183 CLRLALLVAEIK 218
L+L ++ +++
Sbjct: 617 YLKLDKVMRDLE 628
>gb|EMT07478.1| hypothetical protein F775_00276 [Aegilops tauschii]
Length = 689
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L +LY + RW D G +K PGCSLIE+NG +EF+ GD+S+P E+
Sbjct: 462 YVLLSNLYAKSNRWGDVRWLRQVMMEKGIKKEPGCSLIEMNGTIHEFVAGDRSHPMSEEI 521
Query: 183 CLRLALLVAEIKED 224
+L ++ ++K D
Sbjct: 522 YSKLDKVLTDLKND 535
>ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L +LY + RW+D G +K PGCSLIE+NG +EFI GD+S+P E+
Sbjct: 461 YILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEI 520
Query: 183 CLRLALLVAEIKE 221
+L ++ ++K+
Sbjct: 521 YSKLDKVLTDLKD 533
>ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Solanum tuberosum]
Length = 752
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y +WD+ G +K PGCSLIE++G+ +EF+ GD+S+P +
Sbjct: 586 YVLLCNIYAACKKWDNLRETRRIMTDRGIKKTPGCSLIEMHGIVHEFVAGDQSHPQSKSI 645
Query: 183 CLRLALLVAEIK 218
+LA L+ E+K
Sbjct: 646 YSKLAELIGELK 657
>ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Setaria italica]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/72 (34%), Positives = 45/72 (62%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y + RW+D G +K PGCSLIE+NG+ +EF+ GD+S+P +E+
Sbjct: 501 YILLSNMYAKSNRWEDVRRLRQSIMEKGIKKEPGCSLIEMNGMIHEFVAGDRSHPMSNEI 560
Query: 183 CLRLALLVAEIK 218
+L ++ +++
Sbjct: 561 YSKLENIITDLE 572
>ref|XP_004236458.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Solanum lycopersicum]
Length = 752
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y +WD+ G +K PGCSLIE++G+ +EF+ GD+S+P +
Sbjct: 586 YVLLCNIYAACKKWDNLRETRRIMTDRGIKKTPGCSLIEMHGIVHEFVAGDQSHPQSKSI 645
Query: 183 CLRLALLVAEIK 218
+LA L+ E+K
Sbjct: 646 YSKLAELIGELK 657
>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 12 LLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSELCLR 191
L ++Y RW+D G +K PGCSLIEV+G+ +EF+VGD S+P + E+C
Sbjct: 688 LANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSM 747
Query: 192 LALLVAE---IKEDNAEA 236
L + + +KE E+
Sbjct: 748 LNRVTGQLLGLKESQVES 765
>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222850518|gb|EEE88065.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 738
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y A +WD G K PGCS IEVNG+ +EF+VGD S+P +E+
Sbjct: 571 YVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEI 630
Query: 183 CLRLALLVAEIK 218
+L +VA IK
Sbjct: 631 YSKLDEIVARIK 642
>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 12 LLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSELCLR 191
L ++Y RW+D G +K PGCSLIEV+G+ +EF+VGD S+P + E+C
Sbjct: 642 LANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSM 701
Query: 192 LALLVAE---IKEDNAEA 236
L + + +KE E+
Sbjct: 702 LNRVTGQLLGLKESQVES 719
>ref|XP_006643820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Oryza brachyantha]
Length = 659
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y + RW+D G +K PGCS+IE+NG+ YEF+ D+S+P E+
Sbjct: 493 YILLSNMYAKSNRWEDVQRIRQAIMEKGIKKEPGCSMIEINGMIYEFVAADRSHPMSKEI 552
Query: 183 CLRLALLVAEIK 218
+L ++ +++
Sbjct: 553 YSKLEKVLTDLR 564
>gb|EXB63808.1| hypothetical protein L484_021080 [Morus notabilis]
Length = 615
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y D+ WD G RK PGCS+IEV+G +EF VGDKS+P E+
Sbjct: 449 YVLLSNMYADSKNWDGVSNVRQIMKAKGVRKLPGCSVIEVDGEVHEFFVGDKSHPRYDEI 508
Query: 183 CLRLALLVAEIKEDNAEAN 239
++L + +K AN
Sbjct: 509 EVKLGDISMRLKSFGYTAN 527
>ref|XP_006470592.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Citrus sinensis]
Length = 661
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++YRD+ W++ G K PGCS IEVNG+ YEFIV DKS+P + ++
Sbjct: 591 YVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQI 650
>ref|XP_006446101.1| hypothetical protein CICLE_v10017659mg [Citrus clementina]
gi|557548712|gb|ESR59341.1| hypothetical protein
CICLE_v10017659mg [Citrus clementina]
Length = 658
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++YRD+ W++ G K PGCS IEVNG+ YEFIV DKS+P + ++
Sbjct: 591 YVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQI 650
>ref|XP_006392246.1| hypothetical protein EUTSA_v10023355mg [Eutrema salsugineum]
gi|557088752|gb|ESQ29532.1| hypothetical protein
EUTSA_v10023355mg [Eutrema salsugineum]
Length = 617
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L +Y A RW+D G RK PGCS IEVNG+ +EF GD S+P E+
Sbjct: 449 YVLLSRVYASASRWNDVGTVRKLMTEHGIRKEPGCSSIEVNGISHEFFAGDTSHPQTKEI 508
Query: 183 CLRLALLVAEIK 218
+L ++ +++
Sbjct: 509 YQQLKVIEDKLR 520
>ref|XP_007207628.1| hypothetical protein PRUPE_ppa020734mg [Prunus persica]
gi|462403270|gb|EMJ08827.1| hypothetical protein
PRUPE_ppa020734mg [Prunus persica]
Length = 747
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +3
Query: 3 YMSLLSLYRDACRWDDXXXXXXXXXXXGCRKNPGCSLIEVNGVCYEFIVGDKSYPPVSEL 182
Y+ L ++Y + RWDD G +K+PG S++E+ G ++FI DKSYP E+
Sbjct: 658 YVGLSNVYALSKRWDDARSLREAMERRGVKKSPGFSIVEIFGTLHKFIAHDKSYPESEEI 717
Query: 183 CLRLALLVAEIKEDNAEANFEGF*TTI 263
+ L+ +V EIK D N + F T+
Sbjct: 718 YMTLSYIVNEIKFDMDYRNQDYFLCTM 744