BLASTX nr result
ID: Cocculus23_contig00044251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044251
(262 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [A... 174 9e-42
ref|XP_007210909.1| hypothetical protein PRUPE_ppa000714mg [Prun... 171 1e-40
ref|XP_004236490.1| PREDICTED: putative pre-mRNA-splicing factor... 170 2e-40
ref|XP_006345153.1| PREDICTED: putative pre-mRNA-splicing factor... 169 3e-40
ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor... 169 3e-40
ref|XP_007208575.1| hypothetical protein PRUPE_ppa023487mg [Prun... 169 3e-40
ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor... 169 5e-40
gb|EYU23572.1| hypothetical protein MIMGU_mgv1a000639mg [Mimulus... 168 6e-40
ref|XP_006440706.1| hypothetical protein CICLE_v10019101mg [Citr... 168 6e-40
ref|XP_007037508.1| RNA helicase family protein isoform 3 [Theob... 168 6e-40
ref|XP_007037507.1| RNA helicase family protein isoform 2 [Theob... 168 6e-40
ref|XP_007037506.1| RNA helicase family protein isoform 1 [Theob... 168 6e-40
ref|XP_001760493.1| predicted protein [Physcomitrella patens] gi... 168 8e-40
gb|AAF81347.1|AC007767_27 Strong similarity to an unknown pre-mR... 167 2e-39
ref|NP_001185127.1| DEAH RNA helicase homolog PRP2 [Arabidopsis ... 167 2e-39
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 167 2e-39
ref|NP_174527.2| DEAH RNA helicase homolog PRP2 [Arabidopsis tha... 167 2e-39
ref|XP_006374093.1| RNA helicase family protein [Populus trichoc... 166 2e-39
ref|XP_006415186.1| hypothetical protein EUTSA_v10006650mg [Eutr... 166 3e-39
ref|XP_006415185.1| hypothetical protein EUTSA_v10006650mg [Eutr... 166 3e-39
>ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [Amborella trichopoda]
gi|548839655|gb|ERM99915.1| hypothetical protein
AMTR_s00110p00073830 [Amborella trichopoda]
Length = 1044
Score = 174 bits (442), Expect = 9e-42
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMIIASDKYKCSEE+ITIAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 823 LDPMLSKMIIASDKYKCSEEVITIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDH 882
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVYNSWKET +STQWCYENYIQV
Sbjct: 883 IALLKVYNSWKETNYSTQWCYENYIQV 909
>ref|XP_007210909.1| hypothetical protein PRUPE_ppa000714mg [Prunus persica]
gi|462406644|gb|EMJ12108.1| hypothetical protein
PRUPE_ppa000714mg [Prunus persica]
Length = 1026
Score = 171 bits (433), Expect = 1e-40
Identities = 77/87 (88%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+E+I+IAAMLS+GNSIFYRPKDKQVHADNA++NFH G+VGDH
Sbjct: 805 LDPMLSKMIVASDKYKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDH 864
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVYNSWKET FSTQWCYENYIQV
Sbjct: 865 IALLKVYNSWKETNFSTQWCYENYIQV 891
>ref|XP_004236490.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Solanum lycopersicum]
Length = 1050
Score = 170 bits (430), Expect = 2e-40
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+EII+IAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 831 LDPMLSKMIVASDKYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHVGNVGDH 890
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SW+ET FSTQWCYENYIQV
Sbjct: 891 IALLKVYSSWRETNFSTQWCYENYIQV 917
>ref|XP_006345153.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X2 [Solanum tuberosum]
Length = 909
Score = 169 bits (429), Expect = 3e-40
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+EII+IAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 690 LDPMLSKMIVASDKYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHVGNVGDH 749
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SW+ET FSTQWCYENYIQV
Sbjct: 750 IALLKVYSSWRETDFSTQWCYENYIQV 776
>ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X1 [Solanum tuberosum]
Length = 1050
Score = 169 bits (429), Expect = 3e-40
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+EII+IAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 831 LDPMLSKMIVASDKYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHVGNVGDH 890
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SW+ET FSTQWCYENYIQV
Sbjct: 891 IALLKVYSSWRETDFSTQWCYENYIQV 917
>ref|XP_007208575.1| hypothetical protein PRUPE_ppa023487mg [Prunus persica]
gi|462404217|gb|EMJ09774.1| hypothetical protein
PRUPE_ppa023487mg [Prunus persica]
Length = 1052
Score = 169 bits (429), Expect = 3e-40
Identities = 76/87 (87%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASD+YKCS+E+I+IAAMLS+GNSIFYRPKDKQVHADNA++NFH G+VGDH
Sbjct: 831 LDPMLSKMIVASDQYKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDH 890
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVYNSWKET FSTQWCYENYIQV
Sbjct: 891 IALLKVYNSWKETNFSTQWCYENYIQV 917
>ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1042
Score = 169 bits (427), Expect = 5e-40
Identities = 76/87 (87%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+EII+IA+MLS+GNSIFYRPKDKQVHADNA++NFH G+VGDH
Sbjct: 824 LDPMLSKMIVASDKYKCSDEIISIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDH 883
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKV+NSWKET FSTQWCYENYIQV
Sbjct: 884 IALLKVFNSWKETNFSTQWCYENYIQV 910
>gb|EYU23572.1| hypothetical protein MIMGU_mgv1a000639mg [Mimulus guttatus]
Length = 1035
Score = 168 bits (426), Expect = 6e-40
Identities = 76/87 (87%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKY+CS+EII++AAMLS+GNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 814 LDPMLSKMIVASDKYQCSDEIISVAAMLSIGNSIFYRPKDKQVHADNARMNFHMGNVGDH 873
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET FSTQWCYENYIQV
Sbjct: 874 IALLKVYSSWKETNFSTQWCYENYIQV 900
>ref|XP_006440706.1| hypothetical protein CICLE_v10019101mg [Citrus clementina]
gi|557542968|gb|ESR53946.1| hypothetical protein
CICLE_v10019101mg [Citrus clementina]
Length = 700
Score = 168 bits (426), Expect = 6e-40
Identities = 77/87 (88%), Positives = 84/87 (96%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+EIITIAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 480 LDPMLSKMIVASDKYKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDH 539
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALL+VYNSW+E +STQWCYENYIQV
Sbjct: 540 IALLRVYNSWRECNYSTQWCYENYIQV 566
>ref|XP_007037508.1| RNA helicase family protein isoform 3 [Theobroma cacao]
gi|508774753|gb|EOY22009.1| RNA helicase family protein
isoform 3 [Theobroma cacao]
Length = 924
Score = 168 bits (426), Expect = 6e-40
Identities = 75/87 (86%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+E+I+I+AMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 703 LDPMLSKMIVASDKYKCSDEVISISAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDH 762
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IAL+KVYNSW+ET +STQWCYENYIQV
Sbjct: 763 IALMKVYNSWRETNYSTQWCYENYIQV 789
>ref|XP_007037507.1| RNA helicase family protein isoform 2 [Theobroma cacao]
gi|508774752|gb|EOY22008.1| RNA helicase family protein
isoform 2 [Theobroma cacao]
Length = 1055
Score = 168 bits (426), Expect = 6e-40
Identities = 75/87 (86%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+E+I+I+AMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 834 LDPMLSKMIVASDKYKCSDEVISISAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDH 893
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IAL+KVYNSW+ET +STQWCYENYIQV
Sbjct: 894 IALMKVYNSWRETNYSTQWCYENYIQV 920
>ref|XP_007037506.1| RNA helicase family protein isoform 1 [Theobroma cacao]
gi|508774751|gb|EOY22007.1| RNA helicase family protein
isoform 1 [Theobroma cacao]
Length = 1054
Score = 168 bits (426), Expect = 6e-40
Identities = 75/87 (86%), Positives = 85/87 (97%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDKYKCS+E+I+I+AMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 834 LDPMLSKMIVASDKYKCSDEVISISAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDH 893
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IAL+KVYNSW+ET +STQWCYENYIQV
Sbjct: 894 IALMKVYNSWRETNYSTQWCYENYIQV 920
>ref|XP_001760493.1| predicted protein [Physcomitrella patens] gi|162688190|gb|EDQ74568.1|
predicted protein [Physcomitrella patens]
Length = 1045
Score = 168 bits (425), Expect = 8e-40
Identities = 74/87 (85%), Positives = 84/87 (96%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
+DPMLSKM++ASD YKCSEE++TI AMLS+GNSIFYRPKDKQVHADNA+MNFHAG+VGDH
Sbjct: 824 MDPMLSKMLVASDNYKCSEEVVTICAMLSIGNSIFYRPKDKQVHADNARMNFHAGNVGDH 883
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET +STQWCYENYIQV
Sbjct: 884 IALLKVYDSWKETNYSTQWCYENYIQV 910
>gb|AAF81347.1|AC007767_27 Strong similarity to an unknown pre-mRNA splicing factor RNA helicase
At2g35340 gi|3608155 from Arabidopsis thaliana BAC T32F12
gb|AC005314. ESTs gb|AV566249 and gb|AI998735 come from
this gene [Arabidopsis thaliana]
Length = 1090
Score = 167 bits (422), Expect = 2e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ SDKYKCS+EII+IAAMLS+G SIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 856 LDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDH 915
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET FSTQWCYENYIQV
Sbjct: 916 IALLKVYSSWKETNFSTQWCYENYIQV 942
>ref|NP_001185127.1| DEAH RNA helicase homolog PRP2 [Arabidopsis thaliana]
gi|332193372|gb|AEE31493.1| DEAH RNA helicase homolog
PRP2 [Arabidopsis thaliana]
Length = 1034
Score = 167 bits (422), Expect = 2e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ SDKYKCS+EII+IAAMLS+G SIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 814 LDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDH 873
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET FSTQWCYENYIQV
Sbjct: 874 IALLKVYSSWKETNFSTQWCYENYIQV 900
>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Vitis vinifera]
Length = 1056
Score = 167 bits (422), Expect = 2e-39
Identities = 76/87 (87%), Positives = 84/87 (96%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+A+D YKCS+EII+IAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 835 LDPMLSKMIVAADNYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDH 894
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET +STQWCYENYIQV
Sbjct: 895 IALLKVYSSWKETNYSTQWCYENYIQV 921
>ref|NP_174527.2| DEAH RNA helicase homolog PRP2 [Arabidopsis thaliana]
gi|18377729|gb|AAL67014.1| putative RNA helicase
[Arabidopsis thaliana] gi|22136924|gb|AAM91806.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332193371|gb|AEE31492.1| DEAH RNA helicase homolog
PRP2 [Arabidopsis thaliana]
Length = 1044
Score = 167 bits (422), Expect = 2e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ SDKYKCS+EII+IAAMLS+G SIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 824 LDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDH 883
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET FSTQWCYENYIQV
Sbjct: 884 IALLKVYSSWKETNFSTQWCYENYIQV 910
>ref|XP_006374093.1| RNA helicase family protein [Populus trichocarpa]
gi|550321716|gb|ERP51890.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1057
Score = 166 bits (421), Expect = 2e-39
Identities = 77/87 (88%), Positives = 84/87 (96%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ASDK KCS+EII+IAAMLSVGNSIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 832 LDPMLSKMIVASDKCKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDH 891
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET +STQWCYENYIQV
Sbjct: 892 IALLKVYSSWKETNYSTQWCYENYIQV 918
>ref|XP_006415186.1| hypothetical protein EUTSA_v10006650mg [Eutrema salsugineum]
gi|557092957|gb|ESQ33539.1| hypothetical protein
EUTSA_v10006650mg [Eutrema salsugineum]
Length = 1045
Score = 166 bits (420), Expect = 3e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ SDKYKCS+EII+IAAMLSVG SIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 825 LDPMLSKMIVVSDKYKCSDEIISIAAMLSVGGSIFYRPKDKQVHADNARMNFHTGNVGDH 884
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET +STQWCYENYIQV
Sbjct: 885 IALLKVYSSWKETNYSTQWCYENYIQV 911
>ref|XP_006415185.1| hypothetical protein EUTSA_v10006650mg [Eutrema salsugineum]
gi|557092956|gb|ESQ33538.1| hypothetical protein
EUTSA_v10006650mg [Eutrema salsugineum]
Length = 1034
Score = 166 bits (420), Expect = 3e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 1 LDPMLSKMIIASDKYKCSEEIITIAAMLSVGNSIFYRPKDKQVHADNAKMNFHAGDVGDH 180
LDPMLSKMI+ SDKYKCS+EII+IAAMLSVG SIFYRPKDKQVHADNA+MNFH G+VGDH
Sbjct: 814 LDPMLSKMIVVSDKYKCSDEIISIAAMLSVGGSIFYRPKDKQVHADNARMNFHTGNVGDH 873
Query: 181 IALLKVYNSWKETGFSTQWCYENYIQV 261
IALLKVY+SWKET +STQWCYENYIQV
Sbjct: 874 IALLKVYSSWKETNYSTQWCYENYIQV 900