BLASTX nr result
ID: Cocculus23_contig00044194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00044194
(453 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Popu... 107 2e-21
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,... 104 1e-20
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera] 104 1e-20
ref|XP_007139634.1| hypothetical protein PHAVU_008G046300g [Phas... 103 2e-20
ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein... 103 2e-20
ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfam... 103 2e-20
gb|EYU26788.1| hypothetical protein MIMGU_mgv1a026368mg, partial... 102 7e-20
gb|EXB61730.1| hypothetical protein L484_008796 [Morus notabilis] 101 1e-19
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223... 100 2e-19
ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citr... 98 1e-18
ref|XP_004489104.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_004489102.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp.... 90 4e-16
>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Glycine max]
gi|571479155|ref|XP_006587776.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Glycine max]
gi|571479157|ref|XP_006587777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Glycine max]
Length = 693
Score = 112 bits (279), Expect = 7e-23
Identities = 52/78 (66%), Positives = 65/78 (83%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM VL+RL+KKLW RTV TL+RKL SE KV MAA FFH+LLD+DPN +++T+A FMTAC
Sbjct: 606 SAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTAC 665
Query: 183 YDNNKYSVASELSGRITK 236
Y++NKY + S+LS RI K
Sbjct: 666 YESNKYDLVSDLSARIYK 683
>ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Populus trichocarpa]
gi|550322786|gb|EEF06503.2| hypothetical protein
POPTR_0015s15360g [Populus trichocarpa]
Length = 594
Score = 107 bits (266), Expect = 2e-21
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AM +L+RLDKKLW RTV TLIRKL SE KV MA FFH+LLD+D N D++TL F TAC
Sbjct: 514 TAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTAC 573
Query: 183 YDNNKYSVASELSGRITK 236
Y++NKY++ S+LS RI+K
Sbjct: 574 YESNKYALVSDLSERISK 591
>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 104 bits (260), Expect = 1e-20
Identities = 47/76 (61%), Positives = 63/76 (82%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+A+ VLDRL+K+ W RTV TL+RKL SEGK++MAA FFH+LLD++PN +++TL GFM C
Sbjct: 628 TAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKC 687
Query: 183 YDNNKYSVASELSGRI 230
Y++NKY + SELS RI
Sbjct: 688 YESNKYGLVSELSERI 703
>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 712
Score = 104 bits (260), Expect = 1e-20
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AM +L+RL+KKLW RTV TLIRKL SE KV +AA FFH+LLD+D N D+ITLA F TAC
Sbjct: 632 TAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTAC 691
Query: 183 YDNNKYSVASELSGRITK 236
Y++NK+++ S+LS RI+K
Sbjct: 692 YESNKFALVSDLSERISK 709
>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 104 bits (260), Expect = 1e-20
Identities = 47/76 (61%), Positives = 63/76 (82%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+A+ VLDRL+K+ W RTV TL+RKL SEGK++MAA FFH+LLD++PN +++TL GFM C
Sbjct: 628 TAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKC 687
Query: 183 YDNNKYSVASELSGRI 230
Y++NKY + SELS RI
Sbjct: 688 YESNKYGLVSELSERI 703
>ref|XP_007139634.1| hypothetical protein PHAVU_008G046300g [Phaseolus vulgaris]
gi|593332419|ref|XP_007139635.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
gi|561012767|gb|ESW11628.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
gi|561012768|gb|ESW11629.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
Length = 698
Score = 103 bits (258), Expect = 2e-20
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM VL+RL+KK W RTV TL+RKLSSE KV MAA FF +LLD DP+ D++TLA FMTAC
Sbjct: 612 SAMVVLERLEKKPWIRTVNTLVRKLSSEKKVGMAALFFRKLLDMDPHVDRVTLAAFMTAC 671
Query: 183 YDNNKYSVASELSGRITK 236
Y+++ Y++ S+LS RI K
Sbjct: 672 YESSNYALVSDLSSRIYK 689
>ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780307|gb|EOY27563.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 738
Score = 103 bits (258), Expect = 2e-20
Identities = 49/77 (63%), Positives = 64/77 (83%)
Frame = +3
Query: 6 AMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTACY 185
AM +L+RL+KKLW RTV TLIRKL SE KV +AA FFHRLLD+D N D++TLA FMTACY
Sbjct: 659 AMVMLERLEKKLWMRTVNTLIRKLCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACY 718
Query: 186 DNNKYSVASELSGRITK 236
+ +K+++ S+L+ RI+K
Sbjct: 719 ETDKFALVSDLNERISK 735
>ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508780305|gb|EOY27561.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 692
Score = 103 bits (258), Expect = 2e-20
Identities = 49/77 (63%), Positives = 64/77 (83%)
Frame = +3
Query: 6 AMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTACY 185
AM +L+RL+KKLW RTV TLIRKL SE KV +AA FFHRLLD+D N D++TLA FMTACY
Sbjct: 613 AMVMLERLEKKLWMRTVNTLIRKLCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACY 672
Query: 186 DNNKYSVASELSGRITK 236
+ +K+++ S+L+ RI+K
Sbjct: 673 ETDKFALVSDLNERISK 689
>gb|EYU26788.1| hypothetical protein MIMGU_mgv1a026368mg, partial [Mimulus
guttatus]
Length = 662
Score = 102 bits (253), Expect = 7e-20
Identities = 48/78 (61%), Positives = 62/78 (79%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AMA+LDRLDKKLW RTV TL+RKL SE KV++AA FF +LLD + D++TLA F TAC
Sbjct: 583 TAMALLDRLDKKLWVRTVSTLVRKLCSEQKVDIAAQFFDKLLDANQTLDRVTLAAFTTAC 642
Query: 183 YDNNKYSVASELSGRITK 236
YD+N Y++ S++S RI K
Sbjct: 643 YDSNHYALVSDMSKRIRK 660
>gb|EXB61730.1| hypothetical protein L484_008796 [Morus notabilis]
Length = 731
Score = 101 bits (251), Expect = 1e-19
Identities = 48/78 (61%), Positives = 62/78 (79%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AMA+L+RLDK+LW RTV TLIRKL + KV MAA FFH L+ +D N D++TLA F TAC
Sbjct: 641 AAMAILERLDKRLWIRTVNTLIRKLCNNKKVGMAALFFHELVGKDRNVDRVTLAAFTTAC 700
Query: 183 YDNNKYSVASELSGRITK 236
Y++NKY++ SEL+ RI K
Sbjct: 701 YESNKYALVSELTERIGK 718
>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 100 bits (250), Expect = 2e-19
Identities = 48/78 (61%), Positives = 63/78 (80%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM +L+RL+KKLW RTV TLIRKL E KV +AA FFH+LLD++ N D++TLA F TAC
Sbjct: 1235 SAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTAC 1294
Query: 183 YDNNKYSVASELSGRITK 236
++NKY++ S+LS RI+K
Sbjct: 1295 IESNKYALVSDLSERISK 1312
>ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 100 bits (250), Expect = 2e-19
Identities = 48/78 (61%), Positives = 63/78 (80%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM +L+RL+KKLW RTV TLIRKL E KV +AA FFH+LLD++ N D++TLA F TAC
Sbjct: 648 SAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTAC 707
Query: 183 YDNNKYSVASELSGRITK 236
++NKY++ S+LS RI+K
Sbjct: 708 IESNKYALVSDLSERISK 725
>ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Solanum tuberosum]
gi|565393841|ref|XP_006362579.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Solanum tuberosum]
gi|565393843|ref|XP_006362580.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Solanum tuberosum]
Length = 716
Score = 100 bits (248), Expect = 3e-19
Identities = 45/78 (57%), Positives = 62/78 (79%)
Frame = +3
Query: 6 AMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTACY 185
AM +LDRL+KKLW RTV TL+RKL SE V++AA FFH+LLD+ + D++TLA FM+ACY
Sbjct: 632 AMGLLDRLEKKLWIRTVSTLVRKLCSEKNVDVAALFFHKLLDKQQSVDRVTLAAFMSACY 691
Query: 186 DNNKYSVASELSGRITKN 239
++N Y + S ++ RITK+
Sbjct: 692 ESNNYDLVSSMNERITKD 709
>ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Fragaria vesca subsp. vesca]
Length = 705
Score = 99.8 bits (247), Expect = 4e-19
Identities = 45/78 (57%), Positives = 62/78 (79%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AM +LDRL+KK W RTV TL+RKL E KV +AA FFH+L+D+D N D++TL F TAC
Sbjct: 625 TAMVILDRLEKKYWIRTVNTLVRKLCCEKKVGIAALFFHKLVDKDQNVDRVTLQAFTTAC 684
Query: 183 YDNNKYSVASELSGRITK 236
Y++NKY++ S+L+ RI+K
Sbjct: 685 YESNKYALLSDLTERISK 702
>ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Solanum lycopersicum]
Length = 716
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +3
Query: 9 MAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTACYD 188
M +LD+L+KKLW RTV TL+RKL SE V +AA FFH+LLD+ + D++TLA FM+ACY+
Sbjct: 633 MGLLDKLEKKLWVRTVSTLVRKLCSEKNVNVAALFFHKLLDKQQSVDRVTLAAFMSACYE 692
Query: 189 NNKYSVASELSGRITKN 239
+NKY + S ++ RITK+
Sbjct: 693 SNKYDLVSSMNERITKD 709
>ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citrus clementina]
gi|557551319|gb|ESR61948.1| hypothetical protein
CICLE_v10014445mg [Citrus clementina]
Length = 707
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/78 (60%), Positives = 61/78 (78%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AM VL+ LDKKLW RTV TLIRKL SE +V MAA FFH+LLD+D N D+++LA AC
Sbjct: 627 TAMIVLESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLDKDQNVDRVSLAALKNAC 686
Query: 183 YDNNKYSVASELSGRITK 236
Y++NKY++ S+LS RI +
Sbjct: 687 YESNKYALFSDLSQRIAE 704
>ref|XP_004489104.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Cicer arietinum]
gi|502090051|ref|XP_004489105.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X4 [Cicer arietinum]
Length = 685
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM +L+RL+KKLW RT TL+RKL SE KV MAA FF++LLD D + +++ LA FMTAC
Sbjct: 598 SAMVILERLEKKLWIRTANTLVRKLCSERKVGMAALFFNKLLDMDLHVNRVALAVFMTAC 657
Query: 183 YDNNKYSVASELSGRITK 236
Y++N Y++ S+LS RI K
Sbjct: 658 YESNNYALVSDLSARIYK 675
>ref|XP_004489102.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Cicer arietinum]
gi|502090045|ref|XP_004489103.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Cicer arietinum]
Length = 705
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM +L+RL+KKLW RT TL+RKL SE KV MAA FF++LLD D + +++ LA FMTAC
Sbjct: 618 SAMVILERLEKKLWIRTANTLVRKLCSERKVGMAALFFNKLLDMDLHVNRVALAVFMTAC 677
Query: 183 YDNNKYSVASELSGRITK 236
Y++N Y++ S+LS RI K
Sbjct: 678 YESNNYALVSDLSARIYK 695
>ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Citrus sinensis]
Length = 707
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/78 (57%), Positives = 60/78 (76%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
+AM +L+ LDKKLW RTV TLIRKL SE +V MAA FFH+LL +D N D+++LA AC
Sbjct: 627 TAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 686
Query: 183 YDNNKYSVASELSGRITK 236
Y++NKY++ S+LS RI +
Sbjct: 687 YESNKYALFSDLSQRIAE 704
>ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/78 (55%), Positives = 62/78 (79%)
Frame = +3
Query: 3 SAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFHRLLDEDPNADQITLAGFMTAC 182
SAM VL+ LDKKLW RTV+TL+RKL SE KV +AA FF +LL++D +AD++TLA F TAC
Sbjct: 644 SAMIVLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 703
Query: 183 YDNNKYSVASELSGRITK 236
++ K ++ ++L+ RI++
Sbjct: 704 SESGKNNLVADLTERISR 721