BLASTX nr result
ID: Cocculus23_contig00043434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00043434
(272 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006473738.1| PREDICTED: F-box protein SKIP23-like [Citrus... 74 2e-11
ref|XP_006343853.1| PREDICTED: F-box protein At2g17036-like [Sol... 72 6e-11
ref|XP_006435277.1| hypothetical protein CICLE_v10001350mg [Citr... 72 6e-11
ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Popu... 72 6e-11
ref|XP_004500900.1| PREDICTED: F-box protein At2g26160-like [Cic... 71 1e-10
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 71 2e-10
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 71 2e-10
ref|XP_004245513.1| PREDICTED: F-box protein At2g17036-like [Sol... 70 4e-10
ref|XP_006368067.1| PREDICTED: F-box protein SKIP23-like [Solanu... 67 3e-09
ref|XP_006344379.1| PREDICTED: F-box protein SKIP23-like [Solanu... 67 3e-09
ref|XP_004291318.1| PREDICTED: F-box protein SKIP23-like [Fragar... 67 3e-09
ref|XP_006344504.1| PREDICTED: putative F-box protein At1g65770-... 66 4e-09
ref|XP_006344380.1| PREDICTED: putative F-box protein At2g16290-... 65 8e-09
ref|XP_006343854.1| PREDICTED: probable F-box protein At1g65740-... 65 1e-08
ref|XP_006440155.1| hypothetical protein CICLE_v10024484mg [Citr... 64 2e-08
ref|XP_004246092.1| PREDICTED: putative F-box protein At3g25750-... 64 2e-08
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 64 2e-08
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 64 2e-08
ref|XP_007222965.1| hypothetical protein PRUPE_ppa006772mg [Prun... 63 4e-08
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 63 5e-08
>ref|XP_006473738.1| PREDICTED: F-box protein SKIP23-like [Citrus sinensis]
Length = 406
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDD-SVCVHKDGVGS-DVGVLS 64
QW+ + +L ALF+G NSS+ SA D PGC+ +CIY+TDD S + D G D+G+
Sbjct: 314 QWERMRSLGDTALFIGQNSSLALSASDFPGCRADCIYYTDDYSESNYDDVYGEHDLGIFK 373
Query: 63 YGNGTIEPL--YPGVSRSRL-WPP 1
+G+IEPL YP S RL WPP
Sbjct: 374 LEDGSIEPLPCYPRYSHFRLRWPP 397
>ref|XP_006343853.1| PREDICTED: F-box protein At2g17036-like [Solanum tuberosum]
Length = 389
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Frame = -3
Query: 225 VTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVH---KDGVGSDVGVLSYGN 55
+ +L A F+G N+S+ A PG K NCIYFTD+ + + K G G D+GV + +
Sbjct: 305 IMDLGDQAFFLGANASLSIQASQFPGIKPNCIYFTDNWIGAYLFFKKGCGLDMGVFNLAD 364
Query: 54 GTIEPLYPGVSRSRLWPP 1
G+IEPLY G+S SR+ PP
Sbjct: 365 GSIEPLYDGISVSRVCPP 382
>ref|XP_006435277.1| hypothetical protein CICLE_v10001350mg [Citrus clementina]
gi|557537399|gb|ESR48517.1| hypothetical protein
CICLE_v10001350mg [Citrus clementina]
Length = 406
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDD-SVCVHKDGVGS-DVGVLS 64
QW+ + +L ALF+G NSS+ SA D PGC +CIY+TDD S + D G D+G+
Sbjct: 314 QWERMRSLGDTALFIGQNSSLALSASDFPGCLADCIYYTDDYSESNYDDVYGEHDLGIFK 373
Query: 63 YGNGTIEPL--YPGVSRSRL-WPP 1
+G+IEPL YP S RL WPP
Sbjct: 374 LEDGSIEPLPCYPRYSHFRLRWPP 397
>ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Populus trichocarpa]
gi|550344063|gb|EEE79947.2| hypothetical protein
POPTR_0002s01590g [Populus trichocarpa]
Length = 393
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVHKDG-VGS-DVGVLS 64
+W+ VT+L + LF+G NSS+ SA + GC +CIY+TDD + DG +G D+G+
Sbjct: 301 RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFK 360
Query: 63 YGNGTIEPL--YPGVSRSRL-WPP 1
+G+IEPL YP S SRL WPP
Sbjct: 361 LSDGSIEPLPCYPRNSYSRLQWPP 384
>ref|XP_004500900.1| PREDICTED: F-box protein At2g26160-like [Cicer arietinum]
Length = 396
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = -3
Query: 240 LQWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDD-SVCVHKDGVGS-DVGVL 67
+ W+ + L ALF+G NSSMCFSA D GC+ +CIYFTDD S H D V D G+
Sbjct: 300 MAWRRIETLCDKALFIGANSSMCFSAADFVGCRADCIYFTDDYSDSNHDDAVAKHDFGIF 359
Query: 66 SYGNGTIEPL--YPGVSRSRL-WP 4
+ +IEPL YP S R WP
Sbjct: 360 RLSDESIEPLPCYPRNSYPRFGWP 383
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVHKDGVG--SDVGVLS 64
+W+ V++L ALF+G N S+ S+ D PGCK NCIY+TDD + DG+G D+G+ +
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360
Query: 63 YGNGTIEPLYPGVSRSRLWPP 1
+G+IEPL R R WPP
Sbjct: 361 LEDGSIEPLPCSHFRIR-WPP 380
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVHKDGVG--SDVGVLS 64
+W+ V++L ALF+G N S+ S+ D PGCK NCIY+TDD + DG+G D+G+ +
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360
Query: 63 YGNGTIEPLYPGVSRSRLWPP 1
+G+IEPL R R WPP
Sbjct: 361 LEDGSIEPLPCSHFRIR-WPP 380
>ref|XP_004245513.1| PREDICTED: F-box protein At2g17036-like [Solanum lycopersicum]
Length = 389
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = -3
Query: 225 VTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVH---KDGVGSDVGVLSYGN 55
V +L A F+G N+S+ A PG K NCIYFTD+ + + + G G D+GV + +
Sbjct: 305 VMDLGDQAFFLGANASLSIQASQFPGIKPNCIYFTDNWIGAYLFFEKGCGLDMGVFNLAD 364
Query: 54 GTIEPLYPGVSRSRLWPP 1
G+IEP Y G+S SR+ PP
Sbjct: 365 GSIEPFYDGISVSRVCPP 382
>ref|XP_006368067.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 251
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -3
Query: 204 ALFVGVNSSMCFSAEDIPGCKRNCIYFTDD---SVCVHKDGVGSDVGVLSYGNGTIEPLY 34
ALF+G N+S+ A PG K N IY+TDD S +++G G D+GV + NG+ EP Y
Sbjct: 173 ALFLGANASISVQASQFPGVKPNHIYYTDDFVESYLFYEEGGGRDMGVYNIANGSFEPHY 232
Query: 33 PGVSRSRLWPP 1
GVS SR+ PP
Sbjct: 233 NGVSLSRVCPP 243
>ref|XP_006344379.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 390
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -3
Query: 204 ALFVGVNSSMCFSAEDIPGCKRNCIYFTDD---SVCVHKDGVGSDVGVLSYGNGTIEPLY 34
ALF+G N+S+ A PG K N IY+TDD S +++G G D+GV + NG+ EP Y
Sbjct: 312 ALFLGANASISVQASQFPGVKPNHIYYTDDFVESYLFYEEGGGRDMGVYNIANGSFEPHY 371
Query: 33 PGVSRSRLWPP 1
GVS SR+ PP
Sbjct: 372 NGVSLSRVCPP 382
>ref|XP_004291318.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
Length = 398
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDD-SVCVHKDGVGS-DVGVLS 64
+W+ V NL LF+G NSS SA D PGC NCIYFTDD S ++ GVG D G+
Sbjct: 303 RWEKVENLGDRMLFIGENSSFSLSASDFPGCVGNCIYFTDDYSELNYESGVGGYDSGIFR 362
Query: 63 YGNGTIE--PLYPGVSRSRL-WPP 1
+G I+ P YP S ++ WPP
Sbjct: 363 LRDGMIQELPPYPRNSDYQVHWPP 386
>ref|XP_006344504.1| PREDICTED: putative F-box protein At1g65770-like [Solanum
tuberosum]
Length = 399
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = -3
Query: 216 LQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDD---SVCVHKDGVGSDVGVLSYGNGTI 46
L A F+G N+S+ A PG K N IYFTDD S +++G G D+GV + NG+I
Sbjct: 317 LGDAAFFLGANASISVQASQFPGIKPNHIYFTDDFFESYLSYEEGGGLDMGVFNLANGSI 376
Query: 45 EPLYPGVSRSRLWPP 1
+P Y GVS SR PP
Sbjct: 377 QPHYNGVSLSRFCPP 391
>ref|XP_006344380.1| PREDICTED: putative F-box protein At2g16290-like [Solanum
tuberosum]
Length = 249
Score = 65.5 bits (158), Expect = 8e-09
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -3
Query: 204 ALFVGVNSSMCFSAEDIPGCKRNCIYFTDD---SVCVHKDGVGSDVGVLSYGNGTIEPLY 34
ALF+G N+S+ A PG K N IY+TDD S +++G G D+GV + NG+ EP Y
Sbjct: 171 ALFLGANASISVQASQSPGVKPNHIYYTDDFVESYLSYEEGGGMDMGVYNIANGSFEPHY 230
Query: 33 PGVSRSRLWPP 1
GVS SR+ PP
Sbjct: 231 NGVSLSRVCPP 241
>ref|XP_006343854.1| PREDICTED: probable F-box protein At1g65740-like [Solanum
tuberosum]
Length = 393
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = -3
Query: 219 NLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVH---KDGVGSDVGVLSYGNGT 49
+L A F+G NSS+ A PG K N IYFTD+ +C++ ++G G D+GV + + +
Sbjct: 310 DLGDRAFFLGHNSSISVQASQFPGIKPNHIYFTDNCLCLYLHLREGCGLDMGVFNLADES 369
Query: 48 IEPLYPGVSRSRLWPP 1
I+P Y GVS SR+ PP
Sbjct: 370 IQPHYDGVSLSRVCPP 385
>ref|XP_006440155.1| hypothetical protein CICLE_v10024484mg [Citrus clementina]
gi|557542417|gb|ESR53395.1| hypothetical protein
CICLE_v10024484mg [Citrus clementina]
Length = 362
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = -3
Query: 234 WKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVHK----DGVGSDVGVL 67
W V NL ALF+G NSS A I CK NCIYFTDD V + G G D+G+
Sbjct: 274 WTEVENLGDRALFLGHNSSFSVDAS-ISHCKANCIYFTDDCVDAYWYIACKGGGKDMGIY 332
Query: 66 SYGNGTIEPLYPGVSRSRLWPP 1
TIEP + G S +R+ PP
Sbjct: 333 DLQEETIEPFFKGDSYNRITPP 354
>ref|XP_004246092.1| PREDICTED: putative F-box protein At3g25750-like [Solanum
lycopersicum]
Length = 372
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -3
Query: 249 ERQLQWKNVTNLQSLALFVGVNS-SMCFSAEDIPGCKRNCIYFTDDSVCVHKDGVGSDVG 73
E +L+ K + L A F+G N+ + C + G K N IYFTDD + + G G D G
Sbjct: 280 EGELKEKEIKTLGDSAFFLGFNTGACCIDSSKFSGIKPNHIYFTDDWNDILEGGGGKDTG 339
Query: 72 VLSYGNGTIEPLYPGVSRSRLWPP 1
V +Y +G IE +YPG+S S + PP
Sbjct: 340 VYNYEDGQIESIYPGLSLSLICPP 363
>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 458
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVC--VHKDGV--GSDVGV 70
+W V +L + LF+G N S SA + GCK NCI+FTD +C V +D V GSD+ +
Sbjct: 296 KWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAI 355
Query: 69 LSYGNGTIEPLYPGVSRSRL-WPP 1
GTI PL SRL WPP
Sbjct: 356 FDLEFGTISPLSDSPMYSRLFWPP 379
>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 404
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVC--VHKDGV--GSDVGV 70
+W V +L + LF+G N S SA + GCK NCI+FTD +C V +D V GSD+ +
Sbjct: 296 KWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAI 355
Query: 69 LSYGNGTIEPLYPGVSRSRL-WPP 1
GTI PL SRL WPP
Sbjct: 356 FDLEFGTISPLSDSPMYSRLFWPP 379
>ref|XP_007222965.1| hypothetical protein PRUPE_ppa006772mg [Prunus persica]
gi|462419901|gb|EMJ24164.1| hypothetical protein
PRUPE_ppa006772mg [Prunus persica]
Length = 396
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDD-SVCVHKDGVGS-DVGVLS 64
+W+ V NL +F+G NSS SA D PG NCIYFTDD S ++ G+G D G+
Sbjct: 301 RWEKVENLGERMVFIGENSSFSLSASDFPGSVGNCIYFTDDYSESNYESGLGGYDSGIFR 360
Query: 63 YGNGTIE--PLYPGVSRSRL-WPP 1
+GTI+ P YP S + WPP
Sbjct: 361 IWDGTIQELPPYPRNSNYEVHWPP 384
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 62.8 bits (151), Expect = 5e-08
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = -3
Query: 237 QWKNVTNLQSLALFVGVNSSMCFSAEDIPGCKRNCIYFTDDSVCVHKDG--VGSDVGVLS 64
QW ++ L ALF+G NSS+ SA D GC NCIY+TDD + + DG D+G+
Sbjct: 306 QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFK 365
Query: 63 YGNGTIEPL--YPGVSRSRL-WPP 1
+ TIEPL YP S L W P
Sbjct: 366 LCDETIEPLPCYPRNFTSPLQWSP 389