BLASTX nr result
ID: Cocculus23_contig00043427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00043427
(400 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 171 7e-41
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 169 3e-40
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 168 8e-40
ref|XP_007044996.1| DNA polymerase alpha 2 [Theobroma cacao] gi|... 166 2e-39
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 164 9e-39
ref|XP_007224272.1| hypothetical protein PRUPE_ppa018609mg [Prun... 163 2e-38
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 159 4e-37
ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-li... 158 8e-37
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S... 157 2e-36
gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays] 156 2e-36
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma... 156 2e-36
ref|XP_007163728.1| hypothetical protein PHAVU_001G259300g [Phas... 156 3e-36
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 156 3e-36
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li... 156 3e-36
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 155 5e-36
ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li... 155 5e-36
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo... 155 5e-36
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi... 155 5e-36
ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group] g... 155 5e-36
gb|ABG21942.1| DNA polymerase alpha subunit B family protein, ex... 155 5e-36
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 171 bits (434), Expect = 7e-41
Identities = 85/120 (70%), Positives = 98/120 (81%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGE ISR P DGSSRDRM +A H+LSQRSFYPLYP +E +PLD SLAPEAL++S+IPD
Sbjct: 499 LSGEMISRNPTDGSSRDRMTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPD 558
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+LILPSDLA FVKVLS+ + E VKCICVNPGRLAKG GGG FVELN+ S D+T+A
Sbjct: 559 VLILPSDLASFVKVLSLGGRNEGEELVKCICVNPGRLAKGEGGGHFVELNYQGSPDKTSA 618
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 169 bits (429), Expect = 3e-40
Identities = 86/120 (71%), Positives = 95/120 (79%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEE SR P DG+SRDRM RLA H+L QRSFYPLYPP+E VPLD SLAPEAL IS IPD
Sbjct: 499 LSGEETSRFPKDGTSRDRMSRLANHILGQRSFYPLYPPAESVPLDFSLAPEALNISLIPD 558
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+LILPSDL FVKVLS+ + VKCICVNPGRL+KG GGGTFVELN+ S D +NA
Sbjct: 559 ILILPSDLKYFVKVLSLGEGE---PPVKCICVNPGRLSKGEGGGTFVELNYYGSPDTSNA 615
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 168 bits (425), Expect = 8e-40
Identities = 81/120 (67%), Positives = 97/120 (80%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
+SGEE+SR P DG+ DRM RLA H++SQRSFYPLYPP+EDVPLD SLAPEAL I+SIPD
Sbjct: 497 ISGEEMSRNPTDGTPSDRMSRLANHIISQRSFYPLYPPAEDVPLDFSLAPEALHINSIPD 556
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+LILPSD+ F+KVL++ + EQ KCIC+NPGRLAKG GGGTF ELN+ S D+ NA
Sbjct: 557 ILILPSDMKYFMKVLTLGEGE---EQRKCICINPGRLAKGEGGGTFAELNYQGSPDKMNA 613
>ref|XP_007044996.1| DNA polymerase alpha 2 [Theobroma cacao]
gi|508708931|gb|EOY00828.1| DNA polymerase alpha 2
[Theobroma cacao]
Length = 621
Score = 166 bits (421), Expect = 2e-39
Identities = 84/121 (69%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR DG+ DR+ RLA+H+LSQRSFYPLYPP+E VPLD SLAPEAL I S+PD
Sbjct: 496 LSGEEISRHSMDGTPSDRLSRLASHILSQRSFYPLYPPAEGVPLDSSLAPEALHIPSVPD 555
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQV-KCICVNPGRLAKGVGGGTFVELNFDASNDRTN 359
LLILPSD+ FVKVLS+ +S EQ KCIC+NPGRLAKG GGGTFVEL + S D+ N
Sbjct: 556 LLILPSDIKYFVKVLSLGGTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQGSPDKMN 615
Query: 360 A 362
A
Sbjct: 616 A 616
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 164 bits (416), Expect = 9e-39
Identities = 78/120 (65%), Positives = 93/120 (77%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
L EE+SR P DG+ +RM RLA H+LSQRSFYPLYPP+EDVPLD SLAPEAL I S+P
Sbjct: 497 LGSEEMSRNPTDGTPSNRMSRLANHILSQRSFYPLYPPAEDVPLDFSLAPEALHIPSVPH 556
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+LI+PSD+ F+KVLS+ EQ KC+C+NPGRLAKG GGGTFVELN+ S D+ NA
Sbjct: 557 ILIVPSDMKYFIKVLSLGGRIEGEEQTKCVCINPGRLAKGEGGGTFVELNYRGSPDKMNA 616
>ref|XP_007224272.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
gi|462421208|gb|EMJ25471.1| hypothetical protein
PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 163 bits (413), Expect = 2e-38
Identities = 84/120 (70%), Positives = 92/120 (76%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P DG DRM RLA H++SQRSFYPLYPP+E +PLD SLAPEAL IS IPD
Sbjct: 491 LSGEEISRNPKDGKLSDRMSRLANHIISQRSFYPLYPPAEGIPLDFSLAPEALNISLIPD 550
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+LILPSD+ FVKV S EQVKCICVNPGRLAKG GGGTFVELN+ + D NA
Sbjct: 551 ILILPSDMKHFVKV---KWSGEEKEQVKCICVNPGRLAKGEGGGTFVELNYYGNPDTCNA 607
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 159 bits (402), Expect = 4e-37
Identities = 76/120 (63%), Positives = 93/120 (77%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEE+SR G + DR+ LA+H+L QRSFYPLYPP+E VPLD SLAP+AL IS IPD
Sbjct: 498 LSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISVIPD 557
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+LILPSD+ FVKV+S+ + + EQ +C+CVNPGRLAKG GGGTFVELN+ D+ NA
Sbjct: 558 ILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVELNYFGRPDQINA 617
>ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryza brachyantha]
Length = 410
Score = 158 bits (399), Expect = 8e-37
Identities = 79/120 (65%), Positives = 94/120 (78%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P G DR+GR+ H+L Q+S+YPLYPP VPLD SLA AL+ISS PD
Sbjct: 288 LSGEEISRKPPGGKPGDRIGRICAHILKQQSYYPLYPPPAGVPLDFSLASGALEISSAPD 347
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+D+SS E ICVNPGRLAKG+GGGTFVELN++ D+T+A
Sbjct: 348 VLLLPSDLAPFVKVLSLDESSE--EPKHFICVNPGRLAKGIGGGTFVELNYNEDTDKTSA 405
>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein
SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 157 bits (396), Expect = 2e-36
Identities = 79/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P G DR+GRLA+H+L Q+S+YPLYP + VPLD SLA EAL+ISS PD
Sbjct: 504 LSGEEISRKPPVGKPADRIGRLASHILKQQSYYPLYPSAAGVPLDFSLAKEALEISSAPD 563
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+ + S+ +Q + ICVNPGRLAKG+GGGTFVEL ++ D+TNA
Sbjct: 564 VLLLPSDLAPFVKVLSLGEGSD--DQKRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNA 621
>gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 156 bits (395), Expect = 2e-36
Identities = 78/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSG+EISR P G DR+GRLA+H+L Q+S+YPLYPP+ VPLDLSLA EAL+I S PD
Sbjct: 429 LSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPD 488
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+ + S+ + + ICVNPGRLAKG+GGGTFVEL ++ D+TNA
Sbjct: 489 VLLLPSDLAPFVKVLSLGEGSD--DDRRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNA 546
>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein
ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 156 bits (395), Expect = 2e-36
Identities = 78/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSG+EISR P G DR+GRLA+H+L Q+S+YPLYPP+ VPLDLSLA EAL+I S PD
Sbjct: 504 LSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPD 563
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+ + S+ + + ICVNPGRLAKG+GGGTFVEL ++ D+TNA
Sbjct: 564 VLLLPSDLAPFVKVLSLGEGSD--DDRRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNA 621
>ref|XP_007163728.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
gi|561037192|gb|ESW35722.1| hypothetical protein
PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 156 bits (394), Expect = 3e-36
Identities = 76/119 (63%), Positives = 91/119 (76%)
Frame = +3
Query: 6 SGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPDL 185
SGEEISR DG DRM RLA H+L+Q+SFYPLYPP+E VPLD SLAPEALQ+S +PD+
Sbjct: 502 SGEEISRTAADGKPIDRMSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDI 561
Query: 186 LILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
LILPSD+ FVK+LS + + KCI VNPGRLAKG GGGTFVEL++ +D+ NA
Sbjct: 562 LILPSDIKYFVKMLSSESEGINNSNSKCIAVNPGRLAKGEGGGTFVELHYGGGSDQINA 620
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 156 bits (394), Expect = 3e-36
Identities = 74/120 (61%), Positives = 92/120 (76%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEE+SR DG+S DRMGRLA H+ +QRSFYPLYPP+E +PLD SLA EAL IS+IPD
Sbjct: 496 LSGEEMSRCSKDGTSNDRMGRLANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPD 555
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
++ILPSD+ F+KVLS+ + EQ +C+CVNPGRLAKG G GTF E+ + S + NA
Sbjct: 556 IIILPSDMKYFIKVLSLGGRNEGEEQKRCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNA 615
>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 156 bits (394), Expect = 3e-36
Identities = 81/121 (66%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
+SGEEISR DG DR+ RLA H+L+Q+SFYPLYPP+E VPLD SLAPEALQ+SSIPD
Sbjct: 484 ISGEEISRTAADGKPIDRLSRLANHILNQQSFYPLYPPAEGVPLDFSLAPEALQLSSIPD 543
Query: 183 LLILPSDLAPFVKVLSIDDSSNSG-EQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTN 359
+LILPSD+ FVKVLS S N G KCI VNPGRLAKG GGGTFVEL++ +D+ N
Sbjct: 544 ILILPSDIKYFVKVLS---SENEGINHTKCIAVNPGRLAKGEGGGTFVELDYCGGSDQIN 600
Query: 360 A 362
A
Sbjct: 601 A 601
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 155 bits (392), Expect = 5e-36
Identities = 74/120 (61%), Positives = 92/120 (76%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEE+SR DG+S DRMGRLA H+ +QRSFYPLYPP+E +PLD SLA EAL IS+IPD
Sbjct: 496 LSGEEMSRCSKDGTSNDRMGRLANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPD 555
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
++ILPSD+ F+KVLS+ + EQ KC+CVNPGRLAKG G GTF E+ + S + +A
Sbjct: 556 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMHA 615
>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
Length = 627
Score = 155 bits (392), Expect = 5e-36
Identities = 79/120 (65%), Positives = 95/120 (79%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P G DR+GRLATH+L Q+S+YPLYPP+ VPLD SLA EAL+ISS PD
Sbjct: 505 LSGEEISRKPPVGKPGDRIGRLATHILKQQSYYPLYPPAAGVPLDFSLAKEALEISSAPD 564
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+L SDLAPFVKVLS+ + S+ +Q IC+NPGRLAKG+GGGTFVEL ++ DRT A
Sbjct: 565 VLLLTSDLAPFVKVLSLGEGSDVQKQF--ICMNPGRLAKGIGGGTFVELYYNEDTDRTKA 622
>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 155 bits (392), Expect = 5e-36
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P DR+GR+ TH+L Q+S+YPLYPP VPLD SLA AL+I+S PD
Sbjct: 503 LSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPD 562
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+D+SS E + IC+NPGRLAKG+GGGTFVELN++ D+T+A
Sbjct: 563 VLLLPSDLAPFVKVLSLDESSE--EPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSA 620
>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 155 bits (392), Expect = 5e-36
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P DR+GR+ TH+L Q+S+YPLYPP VPLD SLA AL+I+S PD
Sbjct: 503 LSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPD 562
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+D+SS E + IC+NPGRLAKG+GGGTFVELN++ D+T+A
Sbjct: 563 VLLLPSDLAPFVKVLSLDESSE--EPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSA 620
>ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial
[Oryza sativa Japonica Group]
Length = 400
Score = 155 bits (392), Expect = 5e-36
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P DR+GR+ TH+L Q+S+YPLYPP VPLD SLA AL+I+S PD
Sbjct: 278 LSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPD 337
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+D+SS E + IC+NPGRLAKG+GGGTFVELN++ D+T+A
Sbjct: 338 VLLLPSDLAPFVKVLSLDESSE--EPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSA 395
>gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
Length = 339
Score = 155 bits (392), Expect = 5e-36
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = +3
Query: 3 LSGEEISRIPNDGSSRDRMGRLATHLLSQRSFYPLYPPSEDVPLDLSLAPEALQISSIPD 182
LSGEEISR P DR+GR+ TH+L Q+S+YPLYPP VPLD SLA AL+I+S PD
Sbjct: 217 LSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPD 276
Query: 183 LLILPSDLAPFVKVLSIDDSSNSGEQVKCICVNPGRLAKGVGGGTFVELNFDASNDRTNA 362
+L+LPSDLAPFVKVLS+D+SS E + IC+NPGRLAKG+GGGTFVELN++ D+T+A
Sbjct: 277 VLLLPSDLAPFVKVLSLDESSE--EPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSA 334