BLASTX nr result
ID: Cocculus23_contig00043310
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00043310
(299 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 145 8e-33
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 142 6e-32
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera] 141 1e-31
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 140 2e-31
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 134 2e-29
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 128 7e-28
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 128 7e-28
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 127 2e-27
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 127 2e-27
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 125 5e-27
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 124 1e-26
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc... 123 3e-26
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 121 1e-25
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 120 2e-25
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 120 2e-25
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 120 3e-25
emb|CAN75271.1| hypothetical protein VITISV_043732 [Vitis vinifera] 120 3e-25
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762... 119 3e-25
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 119 3e-25
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 119 4e-25
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 145 bits (365), Expect = 8e-33
Identities = 64/99 (64%), Positives = 77/99 (77%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGEFRAF YL +GI+HR+SCP QQNG E KHRT+VEHGL+LL TASLPLKFWDE
Sbjct: 650 WGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDE 709
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
+FRT ++LSN LPT +L+ P+ LF + PDY FL+VF
Sbjct: 710 SFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVF 748
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 142 bits (357), Expect = 6e-32
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGEFRAF YL +GI+HR+SCP QQNG VE KHRT+VEHGL+LL T SLPLKFWDE
Sbjct: 471 WGGEFRAFQSYLAENGIVHRVSCPXTQQQNGVVEXKHRTIVEHGLTLLHTTSLPLKFWDE 530
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
+FR ++LSN LPT VL+ P+ LF + P+Y FL+VF
Sbjct: 531 SFRIVVYLSNRLPTVVLHHKCPIEVLFKSIPBYSFLKVF 569
>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
Length = 846
Score = 141 bits (355), Expect = 1e-31
Identities = 64/98 (65%), Positives = 76/98 (77%)
Frame = +1
Query: 4 GGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDEA 183
GGEFRAF YL +GI+HR+SCP QQNG E KHRT+VEHGL+LL TASLPLKFWDE+
Sbjct: 233 GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDES 292
Query: 184 FRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
FRT ++LSN LPT VL+ P+ LF + PDY FL+VF
Sbjct: 293 FRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVF 330
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 140 bits (353), Expect = 2e-31
Identities = 61/99 (61%), Positives = 77/99 (77%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+R+F++YL ++GIIHRISCP H+QNG E KHR +VEHG++LLA ASLP K+WDE
Sbjct: 633 WGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDE 692
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AFRTS++L N LPT VL +P+ LFH P Y L+VF
Sbjct: 693 AFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVF 731
>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
Length = 1138
Score = 134 bits (336), Expect = 2e-29
Identities = 61/99 (61%), Positives = 73/99 (73%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGEFRAF YL +GI+HR+SCP QQNG E KHRT+V HGL+LL A LPLKFWDE
Sbjct: 558 WGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAEWKHRTIVXHGLTLLHIAYLPLKFWDE 617
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
+FRT ++LSN LPT VL+ + LF + PDY FL+VF
Sbjct: 618 SFRTVVYLSNRLPTAVLHHKCLIEVLFKSIPDYSFLKVF 656
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 128 bits (322), Expect = 7e-28
Identities = 58/99 (58%), Positives = 72/99 (72%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE++ + + K GI H++SCP HQQNG VE KHR +VE GLSLLA AS+PLKFWDE
Sbjct: 461 WGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDE 520
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF + +L N LP V++ DTP+ +LFH PDYK LR F
Sbjct: 521 AFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTF 559
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 128 bits (322), Expect = 7e-28
Identities = 58/99 (58%), Positives = 72/99 (72%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE++ + + K GI H++SCP HQQNG VE KHR +VE GLSLLA AS+PLKFWDE
Sbjct: 572 WGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDE 631
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF + +L N LP V++ DTP+ +LFH PDYK LR F
Sbjct: 632 AFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTF 670
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 127 bits (318), Expect = 2e-27
Identities = 57/99 (57%), Positives = 70/99 (70%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE++ + + GI H +SCP AHQQNG+ E KHR +VE GLSLLA AS+PLKFWDE
Sbjct: 431 WGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDE 490
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF + +L N PT +LN DTP +LFH PDY LR+F
Sbjct: 491 AFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIF 529
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 127 bits (318), Expect = 2e-27
Identities = 57/99 (57%), Positives = 70/99 (70%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE++ + + GI H +SCP AHQQNG+ E KHR +VE GLSLLA AS+PLKFWDE
Sbjct: 431 WGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDE 490
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF + +L N PT +LN DTP +LFH PDY LR+F
Sbjct: 491 AFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIF 529
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 125 bits (315), Expect = 5e-27
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+RA + + GI+H +SCP HQQNG+ E KHR +VE GLSLL+ A +PLKFWDE
Sbjct: 454 WGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDE 513
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF+ + +L N +P+ V+ TP+ K FH PDY LRVF
Sbjct: 514 AFQAATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRVF 552
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 124 bits (311), Expect = 1e-26
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGEF+AF+ L GI+HR+SCPS QQNG VE KHR VVE GLSLLA AS+PLK+W
Sbjct: 561 WGGEFQAFTNTLCKFGILHRVSCPSTSQQNGRVERKHRHVVEVGLSLLAHASIPLKYWPF 620
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF+++++L N LP++VLN +P L+H P+Y FLRV+
Sbjct: 621 AFQSALYLINRLPSSVLNFSSPYKTLYHCLPNYSFLRVY 659
>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1001
Score = 123 bits (308), Expect = 3e-26
Identities = 55/99 (55%), Positives = 68/99 (68%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+ + + GI HR+SCP AHQQNG E KHR +VE GL+LLA AS+PLKFWDE
Sbjct: 323 WGGEYEKLNSFFTKIGISHRVSCPHAHQQNGAAERKHRHIVEVGLALLAHASMPLKFWDE 382
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF T+ +L N P +N DTP+ +LFH P+Y LR F
Sbjct: 383 AFCTATYLINRTPAKTINFDTPLERLFHQKPEYASLRTF 421
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 121 bits (303), Expect = 1e-25
Identities = 56/99 (56%), Positives = 67/99 (67%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+ + GI H +SCP HQQNG VE KHR +VE GLSLLA AS+PLKFWDE
Sbjct: 571 WGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDE 630
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF + +L N LP+ V+ DTP+ +LF PDYK LR F
Sbjct: 631 AFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTF 669
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 120 bits (302), Expect = 2e-25
Identities = 51/99 (51%), Positives = 72/99 (72%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+++ + + GI+H +SCP HQQNG+ E KHR +VE GLSLL+ AS+PLKFWDE
Sbjct: 578 WGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDE 637
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF+ + +L N +P+ V++ +P+ KLF PDY LR+F
Sbjct: 638 AFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIF 676
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 120 bits (302), Expect = 2e-25
Identities = 51/99 (51%), Positives = 72/99 (72%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+++ + + GI+H +SCP HQQNG+ E KHR +VE GLSLL+ AS+PLKFWDE
Sbjct: 611 WGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDE 670
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF+ + +L N +P+ V++ +P+ KLF PDY LR+F
Sbjct: 671 AFQAATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIF 709
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 120 bits (300), Expect = 3e-25
Identities = 55/99 (55%), Positives = 71/99 (71%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGEFR+ Y + +GIIHR+SCP +QNG +E KHR +VE GL+LLA ASLPLK+W +
Sbjct: 445 WGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPD 504
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF T++FL N LPT VL P LF++ P+Y L+VF
Sbjct: 505 AFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVF 543
>emb|CAN75271.1| hypothetical protein VITISV_043732 [Vitis vinifera]
Length = 436
Score = 120 bits (300), Expect = 3e-25
Identities = 56/99 (56%), Positives = 69/99 (69%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGEFR F YL +GI+ R+SC QQNG + RT+VEHGL+LL TASL LKFWDE
Sbjct: 16 WGGEFRVFQYYLAENGIVDRVSCLHTQQQNGVAKRNDRTIVEHGLTLLHTASLLLKFWDE 75
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
FR ++LSN LPT VL+ P+ LF + P+Y FL+VF
Sbjct: 76 QFRIVVYLSNRLPTAVLHHKCPIEVLFKSIPNYSFLKVF 114
>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
Length = 866
Score = 119 bits (299), Expect = 3e-25
Identities = 53/99 (53%), Positives = 68/99 (68%)
Frame = +1
Query: 1 WGGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDE 180
WGGE+ + + K GI HR+SCP HQQNG E KHR ++E GL+LLA AS+PLKFWD+
Sbjct: 496 WGGEYEKLNSFFKKIGISHRVSCPHTHQQNGAAERKHRHIIEVGLALLANASMPLKFWDQ 555
Query: 181 AFRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
AF T+ +L N LP+ V+N + P +LF DY LRVF
Sbjct: 556 AFLTATYLINLLPSKVINFEIPATRLFGDTSDYSNLRVF 594
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 119 bits (299), Expect = 3e-25
Identities = 59/98 (60%), Positives = 69/98 (70%)
Frame = +1
Query: 4 GGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDEA 183
GGEFR+F +L+ SGI+HR SCP QNG VE KHR VVE GL+LLA A LPLKFW A
Sbjct: 562 GGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYA 621
Query: 184 FRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
F+T+ FL N +P+ VL +P LF PDYKFLRVF
Sbjct: 622 FQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVF 659
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 119 bits (298), Expect = 4e-25
Identities = 59/98 (60%), Positives = 69/98 (70%)
Frame = +1
Query: 4 GGEFRAFSEYLKTSGIIHRISCPSAHQQNGTVEHKHRTVVEHGLSLLATASLPLKFWDEA 183
GGEFR+F +L+ SGI+HR SCP QNG VE KHR VVE GL+LLA A LPLKFW A
Sbjct: 612 GGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYA 671
Query: 184 FRTSIFLSNYLPTTVLNGDTPVNKLFHTPPDYKFLRVF 297
F+T+ FL N +P+ VL +P LF PDYKFLRVF
Sbjct: 672 FQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVF 709