BLASTX nr result
ID: Cocculus23_contig00043259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00043259
(249 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006446597.1| hypothetical protein CICLE_v10018414mg [Citr... 71 2e-10
ref|XP_006470237.1| PREDICTED: nuclear pore membrane glycoprotei... 70 3e-10
ref|XP_006852315.1| hypothetical protein AMTR_s00049p00200350 [A... 70 3e-10
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei... 69 5e-10
emb|CBI34862.3| unnamed protein product [Vitis vinifera] 69 5e-10
gb|EXC20347.1| Nuclear polyadenylated RNA-binding protein 4 [Mor... 68 1e-09
ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-bindin... 68 1e-09
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei... 68 1e-09
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore... 68 1e-09
ref|XP_007150930.1| hypothetical protein PHAVU_004G006700g [Phas... 67 3e-09
ref|XP_002298541.2| hypothetical protein POPTR_0001s35360g [Popu... 66 6e-09
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu... 66 6e-09
ref|XP_007031586.1| RNA-binding family protein isoform 6 [Theobr... 65 7e-09
ref|XP_007031585.1| RNA-binding family protein isoform 5 [Theobr... 65 7e-09
ref|XP_007031584.1| RNA-binding family protein isoform 4 [Theobr... 65 7e-09
ref|XP_007031583.1| RNA-binding family protein isoform 3 [Theobr... 65 7e-09
ref|XP_007031582.1| RNA-binding family protein isoform 2 [Theobr... 65 7e-09
ref|XP_007031581.1| RNA-binding family protein isoform 1 [Theobr... 65 7e-09
ref|XP_004489232.1| PREDICTED: nuclear pore membrane glycoprotei... 65 7e-09
ref|XP_006579786.1| PREDICTED: nuclear pore membrane glycoprotei... 65 1e-08
>ref|XP_006446597.1| hypothetical protein CICLE_v10018414mg [Citrus clementina]
gi|557549208|gb|ESR59837.1| hypothetical protein
CICLE_v10018414mg [Citrus clementina]
Length = 217
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKKGSLVQK 73
+EH IMR H +SRSR FGFIT DTEQAVDDLL GN+++LAGAQVS L K S++ K
Sbjct: 156 QEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVSKLPA-KTVSIISK 213
>ref|XP_006470237.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Citrus
sinensis]
Length = 2296
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKKGSLVQKP 70
+EH IMR H +SRSR FGFIT DTEQAVDDLL GN+++LAGAQV + K + +P
Sbjct: 2066 QEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 2125
>ref|XP_006852315.1| hypothetical protein AMTR_s00049p00200350 [Amborella trichopoda]
gi|548855919|gb|ERN13782.1| hypothetical protein
AMTR_s00049p00200350 [Amborella trichopoda]
Length = 366
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TEQAVDDLL GNRI+LAGAQV + K
Sbjct: 151 KEHQIMRDHSTNRSRGFGFITFETEQAVDDLLVKGNRIELAGAQVEIKKAEPK 203
>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
K+H IMR H +SRSR FGF+T DTEQAVDDLL GN+++LAGAQV + K
Sbjct: 2143 KDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKAEPK 2195
>emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
K+H IMR H +SRSR FGF+T DTEQAVDDLL GN+++LAGAQV + K
Sbjct: 156 KDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKAEPK 208
>gb|EXC20347.1| Nuclear polyadenylated RNA-binding protein 4 [Morus notabilis]
Length = 422
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H +SRSR FGFIT +TEQAVDDLL GN++++AG+QV + K
Sbjct: 189 KEHQIMRDHATSRSRGFGFITFETEQAVDDLLVKGNKLEMAGSQVEIKKAEPK 241
>ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H +SRSR FGFIT +TEQAVDDLL GNR+++AG+QV + K
Sbjct: 121 KEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPK 173
>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H +SRSR FGFIT +TEQAVDDLL GNR+++AG+QV + K
Sbjct: 1536 KEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPK 1588
>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H +SRSR FGFIT +TEQAVDDLL GNR+++AG+QV + K
Sbjct: 2036 KEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPK 2088
>ref|XP_007150930.1| hypothetical protein PHAVU_004G006700g [Phaseolus vulgaris]
gi|561024239|gb|ESW22924.1| hypothetical protein
PHAVU_004G006700g [Phaseolus vulgaris]
Length = 374
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
K+H IMR H ++RSR FGFIT D+E+AVDDLL MGN+I+ AGAQV + K
Sbjct: 157 KDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIEFAGAQVEIKKAEPK 209
>ref|XP_002298541.2| hypothetical protein POPTR_0001s35360g [Populus trichocarpa]
gi|550348945|gb|EEE83346.2| hypothetical protein
POPTR_0001s35360g [Populus trichocarpa]
Length = 373
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = -1
Query: 246 EHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
EH IMR H ++RSR FGFIT DTEQAVDDLL GN+++LAG QV + K
Sbjct: 155 EHQIMRDHSTNRSRGFGFITFDTEQAVDDLLARGNKLELAGTQVEIKKAEPK 206
>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative
[Ricinus communis]
Length = 2256
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = -1
Query: 246 EHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
EH IMR H ++RSR FGFIT DTEQAVDDLL GN+++LAG QV + K
Sbjct: 2043 EHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAGGQVEIKKAEPK 2094
>ref|XP_007031586.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508710615|gb|EOY02512.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 299
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TE AVDDLL GN++ AGAQV R K
Sbjct: 85 KEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQVEIKRAEPK 137
>ref|XP_007031585.1| RNA-binding family protein isoform 5 [Theobroma cacao]
gi|508710614|gb|EOY02511.1| RNA-binding family protein
isoform 5 [Theobroma cacao]
Length = 298
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TE AVDDLL GN++ AGAQV R K
Sbjct: 84 KEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQVEIKRAEPK 136
>ref|XP_007031584.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508710613|gb|EOY02510.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 330
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TE AVDDLL GN++ AGAQV R K
Sbjct: 116 KEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQVEIKRAEPK 168
>ref|XP_007031583.1| RNA-binding family protein isoform 3 [Theobroma cacao]
gi|508710612|gb|EOY02509.1| RNA-binding family protein
isoform 3 [Theobroma cacao]
Length = 298
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TE AVDDLL GN++ AGAQV R K
Sbjct: 84 KEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQVEIKRAEPK 136
>ref|XP_007031582.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508710611|gb|EOY02508.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 362
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TE AVDDLL GN++ AGAQV R K
Sbjct: 148 KEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQVEIKRAEPK 200
>ref|XP_007031581.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508710610|gb|EOY02507.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 368
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
KEH IMR H ++RSR FGFIT +TE AVDDLL GN++ AGAQV R K
Sbjct: 154 KEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQVEIKRAEPK 206
>ref|XP_004489232.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cicer
arietinum]
Length = 2296
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
K+H IMR H ++RSR FGFIT DTE+AVD+LL MGN+I+ AG QV + K
Sbjct: 2067 KDHQIMRDHSTNRSRGFGFITFDTEEAVDELLSMGNKIEFAGTQVEIKKAEPK 2119
>ref|XP_006579786.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2281
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -1
Query: 249 KEHMIMRVHISSRSRVFGFITLDTEQAVDDLLYMGNRIKLAGAQVSALRGRKK 91
K+H IMR H ++RSR FGFIT D+E+AVDDLL MGN+I AG+QV + K
Sbjct: 2068 KDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPK 2120