BLASTX nr result
ID: Cocculus23_contig00043033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00043033
(495 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica... 111 9e-23
ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [C... 92 6e-17
ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago ... 90 4e-16
ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medica... 80 2e-13
emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vu... 70 3e-11
ref|XP_007149658.1| hypothetical protein PHAVU_005G088300g [Phas... 67 3e-09
ref|YP_173423.1| hypothetical protein NitaMp081 [Nicotiana tabac... 59 2e-08
ref|YP_008992280.1| hypothetical protein Salmi_Mp014 (mitochondr... 56 4e-06
pir||S14115 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain ... 52 8e-06
tpg|DAA42289.1| TPA: hypothetical protein ZEAMMB73_350644 [Zea m... 51 9e-06
>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477359|gb|AES58562.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 548
Score = 111 bits (278), Expect = 9e-23
Identities = 55/76 (72%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
Frame = -1
Query: 375 VNKCKLRCPTI*STNHTEVKALKQRTGTTKINVFQLLALHRLSNGPWTKQPLPERT--RG 202
+NKCKLRCPT+ ST+HTE +ALK+RTGT+ INVFQ LALHR SNGPWTK+PLPERT RG
Sbjct: 416 INKCKLRCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPERTMSRG 475
Query: 201 SLPSPTKYISSL*TAI 154
P PT+YIS L AI
Sbjct: 476 PPPPPTRYISRLWAAI 491
>ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]
Length = 828
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = +2
Query: 188 GEGNDPLVLSGSGCFVHGPLDSRCKARS*NTLILVVPVLCFKAFTSVWLVLHIVGQRSLH 367
G G +VLSGSG VHGPLD RCKAR+ NTLI +VPVL F+A SVW VLH VGQRSLH
Sbjct: 338 GGGPLDIVLSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLH 397
Query: 368 LFTHYE 385
LFT+YE
Sbjct: 398 LFTNYE 403
>ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago truncatula]
gi|355477454|gb|AES58657.1| hypothetical protein
MTR_1g006900 [Medicago truncatula]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
Frame = -1
Query: 339 STNHTEVKALKQRTGTTKINVFQLLALHRLSNGPWTKQPLPERT--RGSLPSPTKYISSL 166
ST+HTE +ALK+RTGT+ INVFQ LALHR SNGPWTK+PLPERT RG P PT+YIS L
Sbjct: 40 STDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPPPTRYISRL 99
Query: 165 *TAI 154
AI
Sbjct: 100 WAAI 103
>ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477379|gb|AES58582.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 569
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/57 (71%), Positives = 46/57 (80%), Gaps = 2/57 (3%)
Frame = -1
Query: 318 KALKQRTGTTKINVFQLLALHRLSNGPWTKQPLPERT--RGSLPSPTKYISSL*TAI 154
+ALK+RTGT+ INVFQ LALHR SNGPWTK+PLPERT RG P PT+YIS L AI
Sbjct: 456 RALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPPPTRYISRLWAAI 512
>emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 90
Score = 70.5 bits (171), Expect(2) = 3e-11
Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = -2
Query: 308 SKGRERPKSMCFNFWPCTDYPMDHGQNNHCLKE--PGDHCPP 189
S+GRER +SMC NFWPCTD+PMDHG N HCLK PGD PP
Sbjct: 1 SEGRERAESMCSNFWPCTDHPMDHGLNGHCLKGLCPGDRRPP 42
Score = 23.1 bits (48), Expect(2) = 3e-11
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 190 PYKVHLEPMNRY 155
P+KVHL PM Y
Sbjct: 42 PHKVHLAPMGHY 53
>ref|XP_007149658.1| hypothetical protein PHAVU_005G088300g [Phaseolus vulgaris]
gi|561022922|gb|ESW21652.1| hypothetical protein
PHAVU_005G088300g [Phaseolus vulgaris]
Length = 118
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = -1
Query: 321 VKALKQRTGTTKINVFQLLALHRLSNGPWTKQPLPERT 208
++ALK+RTGT+ INVFQ LALHR SNGPWTK+PLPERT
Sbjct: 25 LRALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPERT 62
>ref|YP_173423.1| hypothetical protein NitaMp081 [Nicotiana tabacum]
gi|56806587|dbj|BAD83488.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 116
Score = 58.9 bits (141), Expect(2) = 2e-08
Identities = 24/33 (72%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Frame = -2
Query: 281 MCFNFWPCTDYPMDHGQNNHCLKE--PGDHCPP 189
MC NFWPCTD+PMDHG N HCLK PGD PP
Sbjct: 1 MCSNFWPCTDHPMDHGLNGHCLKGLCPGDRRPP 33
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 190 PYKVHLEPMNRY 155
P+KVHL PM RY
Sbjct: 33 PHKVHLAPMGRY 44
>ref|YP_008992280.1| hypothetical protein Salmi_Mp014 (mitochondrion) [Salvia
miltiorrhiza] gi|534292256|gb|AGU16548.1| hypothetical
protein Salmi_Mp014 (mitochondrion) [Salvia
miltiorrhiza]
Length = 101
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/41 (58%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = -2
Query: 281 MCFNFWPCTDYPMDHGQNNHCLKE--PGDHCPPLQSTSRAY 165
MC NFWPCTD+PMDHG N HCLK P D PP + R +
Sbjct: 1 MCSNFWPCTDHPMDHGLNGHCLKGLCPRDRRPPTRYILRLW 41
>pir||S14115 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5, truncated -
sugar beet mitochondrion
Length = 591
Score = 52.0 bits (123), Expect(2) = 8e-06
Identities = 21/29 (72%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Frame = -2
Query: 269 FWPCTDYPMDHGQNNHCLKE--PGDHCPP 189
FWPCTD+PMDHG N HCLK PGD PP
Sbjct: 515 FWPCTDHPMDHGLNGHCLKGLCPGDRRPP 543
Score = 23.1 bits (48), Expect(2) = 8e-06
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 190 PYKVHLEPMNRY 155
P+KVHL PM Y
Sbjct: 543 PHKVHLAPMGHY 554
>tpg|DAA42289.1| TPA: hypothetical protein ZEAMMB73_350644 [Zea mays]
Length = 56
Score = 50.8 bits (120), Expect(2) = 9e-06
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2
Query: 281 MCFNFWPCTDYPMDHGQNNHCLK 213
MC NFWPCTD+P DHG N HCLK
Sbjct: 1 MCSNFWPCTDHPTDHGLNGHCLK 23
Score = 24.3 bits (51), Expect(2) = 9e-06
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 208 QGIIALPYKVHLEPMNRY 155
QG AL +KVHL PM RY
Sbjct: 29 QGTAAL-HKVHLAPMGRY 45