BLASTX nr result

ID: Cocculus23_contig00042915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042915
         (271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317217.2| hypothetical protein POPTR_0011s03290g [Popu...    58   2e-06
ref|XP_002316708.2| hypothetical protein POPTR_0011s03290g [Popu...    58   2e-06
ref|XP_006468228.1| PREDICTED: uncharacterized protein LOC102629...    57   3e-06
ref|XP_006449119.1| hypothetical protein CICLE_v10014496mg [Citr...    57   3e-06
ref|NP_001146710.1| uncharacterized protein LOC100280312 precurs...    56   6e-06

>ref|XP_002317217.2| hypothetical protein POPTR_0011s03290g [Populus trichocarpa]
           gi|550327486|gb|EEE97829.2| hypothetical protein
           POPTR_0011s03290g [Populus trichocarpa]
          Length = 677

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
 Frame = +1

Query: 58  LLSVCYLLFFQSIPSKAEDP------ILTDCFDSSNYTTGSQYQSNLNQLFTSLYSQSS- 216
           L SVC  L F  + + A+ P      +  DC    NYTT S YQ+NLNQL TS+Y+ +  
Sbjct: 7   LFSVC--LLFMKVLAMAQQPSDQPVMLYKDCVGKGNYTTNSTYQANLNQLLTSIYTNTEI 64

Query: 217 SNGFINTTFGDIPNRVY 267
           +NGF N ++G   + VY
Sbjct: 65  NNGFYNFSYGQDADTVY 81


>ref|XP_002316708.2| hypothetical protein POPTR_0011s03290g [Populus trichocarpa]
           gi|550327485|gb|EEE97320.2| hypothetical protein
           POPTR_0011s03290g [Populus trichocarpa]
          Length = 665

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
 Frame = +1

Query: 58  LLSVCYLLFFQSIPSKAEDP------ILTDCFDSSNYTTGSQYQSNLNQLFTSLYSQSS- 216
           L SVC  L F  + + A+ P      +  DC    NYTT S YQ+NLNQL TS+Y+ +  
Sbjct: 7   LFSVC--LLFMKVLAMAQQPSDQPVMLYKDCVGKGNYTTNSTYQANLNQLLTSIYTNTEI 64

Query: 217 SNGFINTTFGDIPNRVY 267
           +NGF N ++G   + VY
Sbjct: 65  NNGFYNFSYGQDADTVY 81


>ref|XP_006468228.1| PREDICTED: uncharacterized protein LOC102629057 [Citrus sinensis]
          Length = 1332

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
 Frame = +1

Query: 52  LILLSVCYLLFFQSIPSKAEDP--ILTDCFDSSNYTTGSQYQSNLNQLFTSLYSQSS--- 216
           ++ L V YL  FQ   + A DP  +   C D++N+T  S ++SNLN+L TSL + +S   
Sbjct: 666 VLFLFVIYLSSFQFSFTAAADPTYVYHFCSDTANFTRNSTFESNLNRLLTSLPTNASRGN 725

Query: 217 --SNGFINTTFGDIPNRVY 267
             S GF N T G  PNRVY
Sbjct: 726 GFSRGFFNATAGQDPNRVY 744


>ref|XP_006449119.1| hypothetical protein CICLE_v10014496mg [Citrus clementina]
           gi|557551730|gb|ESR62359.1| hypothetical protein
           CICLE_v10014496mg [Citrus clementina]
          Length = 674

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
 Frame = +1

Query: 52  LILLSVCYLLFFQSIPSKAEDP--ILTDCFDSSNYTTGSQYQSNLNQLFTSLYSQSS--- 216
           ++ L V YL  FQ   + A DP  +   C D++N+T  S ++SNLN+L TSL + +S   
Sbjct: 8   VLFLFVIYLSSFQFSFTAAADPTYVYHFCSDTANFTRNSTFESNLNRLLTSLPTNASRGN 67

Query: 217 --SNGFINTTFGDIPNRVY 267
             S GF N T G  PNRVY
Sbjct: 68  GFSRGFFNATAGQDPNRVY 86


>ref|NP_001146710.1| uncharacterized protein LOC100280312 precursor [Zea mays]
           gi|219888451|gb|ACL54600.1| unknown [Zea mays]
          Length = 668

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +1

Query: 43  LHCLILLSVCYLLFFQSIPSKAEDPILTDCFDSSNYTTGSQYQSNLNQLFTSLYS-QSSS 219
           +H L+ + +C  L   +  + A++P  T C +++NYT GS +Q+NLN L  SL S  S+S
Sbjct: 1   MHSLLPILLCSFLL--ATAANADNPFYTGCPNNTNYTRGSAFQANLNALLASLPSAASAS 58

Query: 220 NGFINTTFGDIPNRVYG 270
            GF   T G  P++ YG
Sbjct: 59  AGFATNTTGTAPDQAYG 75


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