BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042739
         (988 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   465   e-128
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun...   458   e-126
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   452   e-124
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The...   451   e-124
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The...   451   e-124
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun...   451   e-124
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 451   e-124
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun...   451   e-124
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   446   e-123
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par...   444   e-122
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 442   e-121
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300...   438   e-120
emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]   433   e-119
ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prun...   424   e-116
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             424   e-116
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     414   e-113
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              411   e-112
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   411   e-112
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   409   e-112
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         408   e-111

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  465 bits (1197), Expect = e-128
 Identities = 212/327 (64%), Positives = 272/327 (83%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            LTPK   +WRMCVDSRAINKITIKYRFPIPRLDD+LD + G+ IFSK+DL+SGYHQIR+R
Sbjct: 665  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIR 724

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKT+FKTK+GLYEW+VMPFGL+NAPSTFMR+M Q+LKPFIG+FVVVYFD+IL+YS 
Sbjct: 725  PGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSR 784

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   H +HL++V+  LR EK Y  +KKC FMS  V+FLG+++S +G++ D  KI+AI++W
Sbjct: 785  SCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDW 844

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PT I EVRS HG+A+FYRRFI +FS+IMAPIT CMK   F WT  A ++FEEIK K+ 
Sbjct: 845  PVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMV 904

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            + PIL LP+FE +FEV CD S +GIGA+LSQ+G PVA++SEK +G + +YSTYD+EF  V
Sbjct: 905  NPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAV 964

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            VQ ++HW+HYL +K+FV+YS+HEAL++
Sbjct: 965  VQAIRHWQHYLSYKEFVLYSDHEALRY 991


>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
            gi|462405925|gb|EMJ11389.1| hypothetical protein
            PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  458 bits (1179), Expect = e-126
 Identities = 207/327 (63%), Positives = 268/327 (81%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   TWRMCVDSRAINKIT+KYRFPIPRL+D+LD L G+ +FSK+DL+SGYHQIR+R
Sbjct: 668  LVPKKDKTWRMCVDSRAINKITVKYRFPIPRLEDMLDVLSGSKVFSKIDLRSGYHQIRIR 727

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFK+K+GL+EW+VMPFGLSN PSTFMR+MNQ+L+PFIG FVVVYFD+IL+YS 
Sbjct: 728  PGDEWKTAFKSKDGLFEWLVMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIYST 787

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H+ HLR+VL VLR  K++  +KKC F + ++LFLG+++   GI+VDD KI+AIL+W
Sbjct: 788  TKEEHLVHLRQVLDVLRENKLFVNLKKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAILDW 847

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P P T++EVRS HGLA+FYRRF+ HFS+I+APIT C+K  +F W  + +RSF +IKEKL 
Sbjct: 848  PAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEKLC 907

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            +AP+LALPNFE +FEV CD S +G+GA+LSQ  RPVA++SEK    + ++STYD EF  V
Sbjct: 908  TAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAV 967

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ LK W HYLI K+FV++++H+ALK+
Sbjct: 968  VRALKQWEHYLIQKEFVLFTDHQALKY 994


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  452 bits (1162), Expect = e-124
 Identities = 202/317 (63%), Positives = 264/317 (83%)
 Frame = -3

Query: 953 MCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVRSGDEWKTAFK 774
           MCVDSRAINKIT+KYRFPIPRLDD+LD + GATIFSK+DLKSGYHQIR+R GDEWKTAFK
Sbjct: 1   MCVDSRAINKITVKYRFPIPRLDDMLDMMSGATIFSKIDLKSGYHQIRIRPGDEWKTAFK 60

Query: 773 TKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSVNPVLHVQHLR 594
           TK+GLYEWMVMPFGL+NAPSTFMRVM Q+L+PF+GKF+VVYFD+IL+YS +   H+ HL 
Sbjct: 61  TKDGLYEWMVMPFGLTNAPSTFMRVMTQVLRPFMGKFLVVYFDDILIYSKSLEHHIDHLS 120

Query: 593 EVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEWPQPTTITEVR 414
           +V   LR+EK++A  KKC FM+ +V+FLG+++S +G+  D  K+QAI+EWP+P +I +VR
Sbjct: 121 QVCLTLRKEKLFANPKKCVFMTDQVIFLGFVVSSQGVSADPQKVQAIVEWPEPRSIRDVR 180

Query: 413 SLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLTSAPILALPNF 234
           S HGLA+FYRRFI  FS IMAPIT+C+K  +F W+ +A  +F+EIK+++T AP++ LP+F
Sbjct: 181 SFHGLATFYRRFIKEFSVIMAPITDCLKKEEFRWSEEAATAFKEIKQRMTDAPVMRLPDF 240

Query: 233 ELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVVVQTLKHWRHY 54
             +FEV CD S +GIG +LSQ+  P+AY+S K  G +L YSTYD EF  VVQ+L+HWRHY
Sbjct: 241 SKVFEVACDASGIGIGGVLSQEKHPIAYFSAKLSGAKLNYSTYDKEFYAVVQSLRHWRHY 300

Query: 53  LIHKDFVMYSEHEALKH 3
           L+ ++FV+YS+HEAL++
Sbjct: 301 LLPQEFVIYSDHEALRY 317


>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 786

 Score =  451 bits (1161), Expect = e-124
 Identities = 206/327 (62%), Positives = 267/327 (81%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVDSRAINKITIKYRFPIPRLD++LD L G+ +FSK+DLKSGYHQIR+R
Sbjct: 35   LAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMR 94

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKT +GL+EW+VMPFGLSNAPSTFMRVM ++LKPF+  FVVVYFD+IL+YS 
Sbjct: 95   DGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSH 154

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H++HLR+VL VL++E++Y  +KKC FM  EV+FLG+I+S EG+K D  KI+AI EW
Sbjct: 155  TKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEW 214

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PT+I EVRS HGLASFYRRFI +FS+IM+PIT  +K   FEW+  A+++FE +K  +T
Sbjct: 215  PAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKALMT 274

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
             AP+LALP+FE LF V CD S +GIGA+LSQ GRP+ ++SEK    + RYSTYD+EF  +
Sbjct: 275  EAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYAL 334

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ ++HW+HYL +++F +YS+H+AL++
Sbjct: 335  VRAIRHWQHYLAYREFAVYSDHQALRY 361


>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  451 bits (1161), Expect = e-124
 Identities = 206/327 (62%), Positives = 267/327 (81%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVDSRAINKITIKYRFPIPRLD++LD L G+ +FSK+DLKSGYHQIR+R
Sbjct: 583  LAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMR 642

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKT +GL+EW+VMPFGLSNAPSTFMRVM ++LKPF+  FVVVYFD+IL+YS 
Sbjct: 643  DGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSH 702

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H++HLR+VL VL++E++Y  +KKC FM  EV+FLG+I+S EG+K D  KI+AI EW
Sbjct: 703  TKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEW 762

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PT+I EVRS HGLASFYRRFI +FS+IM+PIT  +K   FEW+  A+++FE +K  +T
Sbjct: 763  PAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKALMT 822

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
             AP+LALP+FE LF V CD S +GIGA+LSQ GRP+ ++SEK    + RYSTYD+EF  +
Sbjct: 823  EAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYAL 882

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ ++HW+HYL +++F +YS+H+AL++
Sbjct: 883  VRAIRHWQHYLAYREFAVYSDHQALRY 909


>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
            gi|462402874|gb|EMJ08431.1| hypothetical protein
            PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  451 bits (1161), Expect = e-124
 Identities = 205/327 (62%), Positives = 264/327 (80%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   TWRMCVDSRA+NKI +KYRF IPRL+DILD L G+ +FSK+DL+SGYHQIR+R
Sbjct: 676  LVPKKDKTWRMCVDSRAVNKIKVKYRFSIPRLEDILDVLSGSKVFSKIDLRSGYHQIRIR 735

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFK+K+GL+EW+VMPFGLSNAPSTFMR+MNQ+L+PFIG FVVVYFD+IL+YS 
Sbjct: 736  PGDEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYST 795

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H+ HLR+VL VLR  K+Y  +KKC F + ++LFLG+++   GI+VDD KI+AIL+W
Sbjct: 796  TKEEHLVHLRQVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDW 855

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P P T++EVRS HGLA+FY RF+ HFS+I APIT C+K  +F W  + +RSF +IKEKL 
Sbjct: 856  PAPKTVSEVRSFHGLATFYMRFVRHFSSIAAPITECLKKGRFSWGEEQERSFADIKEKLC 915

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            +AP+LALPNFE +FEV CD S +G+GA+L Q  RPVA++SEK    + ++STYD EF  V
Sbjct: 916  TAPVLALPNFEKVFEVECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAV 975

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ LK W HYLI K+FV++++H+ALK+
Sbjct: 976  VRALKQWEHYLIQKEFVLFTDHQALKY 1002


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  451 bits (1161), Expect = e-124
 Identities = 207/327 (63%), Positives = 260/327 (79%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   TWRMC DSRAIN IT+KYRFPIPRLDD+LD L GA+IFSK+DL+ GYHQ+R+R
Sbjct: 658  LVPKKDGTWRMCTDSRAINNITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIR 717

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEW+VMPFGLSNAPSTFMR+M ++L+P +GKF VVYFD+ILVYS 
Sbjct: 718  EGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSK 777

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H++HL  V  +LR +K+Y +++KC FM  EV FLGY+ISG GI VD   I A+  W
Sbjct: 778  TKGEHLKHLEVVFKILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSW 837

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PTT+TEVRS HGLASFYRRFI +FST++APIT CM+  +F+WT  A++SFE+IK+ + 
Sbjct: 838  PTPTTVTEVRSFHGLASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQLMC 897

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            + PIL LP+F+ LFEV CD S +GIGA+L Q  +PVAY+SEK +G +L+YSTYD EF  +
Sbjct: 898  NTPILKLPDFDQLFEVECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAI 957

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            ++ L HW HYL  K FV++S+HEALK+
Sbjct: 958  IRALMHWNHYLKPKPFVLHSDHEALKY 984


>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
            gi|462417202|gb|EMJ21939.1| hypothetical protein
            PRUPE_ppa023598mg [Prunus persica]
          Length = 1457

 Score =  451 bits (1160), Expect = e-124
 Identities = 206/326 (63%), Positives = 264/326 (80%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   TWRMCVDSRAINKIT+K RFPIPRL+D+LD L G+ +FSK+DL+SGYHQIR+R
Sbjct: 658  LVPKKDKTWRMCVDSRAINKITVKSRFPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIR 717

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFK+K+GL+EW+VMPFGLSNAPSTFMR+MNQ+L+PFIG FVVVYFD+IL+YS 
Sbjct: 718  PGDEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYST 777

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H+ HLR+VL VLR  K+Y  +KKC F + ++LFLG+++   GI+VDD KI+AIL+W
Sbjct: 778  TKEEHLVHLRQVLDVLRENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDW 837

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P P  ++EVRS HGLA+FYRRF+ HFS+I APIT C+K  +F W  + +RSF +IKEKL 
Sbjct: 838  PTPKIVSEVRSFHGLATFYRRFVRHFSSITAPITECLKKGRFSWGDEQERSFADIKEKLC 897

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            +AP+LALPNFE +FEV CD S +G+GA+LSQ  RPVA++SEK      ++STYD EF  V
Sbjct: 898  TAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDACQKWSTYDQEFYAV 957

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALK 6
            V+ LK W HYLI K+FV++++H+AL+
Sbjct: 958  VRALKQWEHYLIQKEFVLFTDHQALR 983


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  446 bits (1146), Expect = e-123
 Identities = 208/328 (63%), Positives = 262/328 (79%), Gaps = 1/328 (0%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   TWRMCVD RAIN IT+KYR+PIPRLDD+LD L GA IFSK+DL+ GYHQIR++
Sbjct: 703  LVPKKDGTWRMCVDCRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQIRMQ 762

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEW+VMPFGL+NAPSTFMR+MN +L+ FIGKFVVVYFD+IL+YS 
Sbjct: 763  KGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDILIYSK 822

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +P  H+ HL+EV  VLRRE++YA ++KC F    V+FLG+I+S +GI+VD++KIQAI +W
Sbjct: 823  DPQKHIIHLKEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSSKGIEVDETKIQAIRDW 882

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCM-KGTKFEWTPDAKRSFEEIKEKL 267
            P P T T+VRS HGLASFYRRF+  FSTI AP+   + K  KFEW P  +++F+ +KEKL
Sbjct: 883  PTPKTATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQEQAFQTLKEKL 942

Query: 266  TSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLV 87
             SA +L+LPNF+  FE+ CD S +GIGA+L Q+G P+AY+SEK  GP L YSTYD E   
Sbjct: 943  CSAQVLSLPNFDKTFEIECDASGIGIGAVLMQEGHPIAYFSEKLSGPALNYSTYDKELYA 1002

Query: 86   VVQTLKHWRHYLIHKDFVMYSEHEALKH 3
            +V+TL+ W HYL  K+FV++S+HEALKH
Sbjct: 1003 LVRTLETWEHYLWFKEFVIHSDHEALKH 1030


>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
            gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
            superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score =  444 bits (1142), Expect = e-122
 Identities = 203/327 (62%), Positives = 263/327 (80%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVDSRAINKITIKYRFPIPRLD++LD L G+ +FSK+DLKSGYHQIR+R
Sbjct: 35   LAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMR 94

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKT +GL+EW+VMPFGLSNAPSTFMRVM ++LKPF+  FVVVYFD+IL+YS 
Sbjct: 95   DGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSH 154

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                H++HLR+VL VL++E++Y  +KKC FM  EV+FLG+I+S EG+K D  KI+AI EW
Sbjct: 155  TKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEW 214

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PT+I EVRS HGLASFYRRFI +FS+IM+PIT  +K   FEW+  A+++FE +K  +T
Sbjct: 215  PAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKALMT 274

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
             AP+LALP+FE LF V CD S +G    LSQ GRP+ ++SEK    + RYSTYD+EF  +
Sbjct: 275  EAPVLALPDFEKLFVVECDASYVGXXXXLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYAL 334

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ ++HW+HYL +++F +YS+H+AL++
Sbjct: 335  VRAIRHWQHYLAYREFAVYSDHQALRY 361


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  442 bits (1136), Expect = e-121
 Identities = 206/327 (62%), Positives = 254/327 (77%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMC DSRAIN ITIKYRFPIPRLDDILD L GA +FSK+DL+ GYHQ+R++
Sbjct: 646  LVPKKDGSWRMCTDSRAINNITIKYRFPIPRLDDILDELSGAQLFSKIDLRQGYHQVRIK 705

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEW+VMPFGLSNAPSTFMR+M ++L+P++G+FVVVYFD+ILVYS 
Sbjct: 706  EGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPYLGRFVVVYFDDILVYSP 765

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   H++HL+ +   LR  K+Y +++KC FM  EV FLG+IIS  GI VD  K++AI  W
Sbjct: 766  SKEEHLKHLQVLFETLREHKLYGKLEKCSFMQNEVQFLGFIISDRGILVDQEKVKAIKSW 825

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P P  IT+VRS HGLASFYRRFI  FST+MAPIT CMK  +F+W   A+ SF  IKEKL 
Sbjct: 826  PIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECMKKGEFKWGDKAESSFNIIKEKLC 885

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
             +PIL LPNF  LFEV CD S +GIGA+L Q+ +P+AY+SEK  G +L YSTYD EF  +
Sbjct: 886  ESPILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAI 945

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ L HW HYL  + FV++S+HEALK+
Sbjct: 946  VRALNHWSHYLKPRPFVLHSDHEALKY 972


>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
            subsp. vesca]
          Length = 1034

 Score =  438 bits (1126), Expect = e-120
 Identities = 200/327 (61%), Positives = 265/327 (81%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVDSRAINKITIKYRFPIP+L+D+LD L G+ +FSK+DL+SGYHQIR++
Sbjct: 705  LVPKKDRSWRMCVDSRAINKITIKYRFPIPQLEDMLDVLGGSVVFSKIDLRSGYHQIRIK 764

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFK+K+GLYEW+VMPFGLSNAPSTFMRVMNQ+LKP+IG  VVVYFD+IL+YS 
Sbjct: 765  LGDEWKTAFKSKDGLYEWLVMPFGLSNAPSTFMRVMNQVLKPYIGTCVVVYFDDILIYSK 824

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   H+QHLR+VL VL+  K+Y  +KKC FM+ ++LFLGY++S EGI VD  K++AI EW
Sbjct: 825  SKEEHLQHLRKVLEVLQENKLYVNLKKCSFMTKKLLFLGYVVSSEGINVDQDKVKAIQEW 884

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P P T+ +VRS HGLA+FYR F+ +FS I APIT CMK  +F+W  + ++SF  IK KL+
Sbjct: 885  PTPKTVGDVRSFHGLATFYRHFVPNFSAITAPITECMKKGRFQWGEEHEKSFAMIKYKLS 944

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            +AP+LAL +F+ +FE+  D   +GIGA+LSQ+ +PVAY+SEK +  + ++STYD EF  V
Sbjct: 945  TAPVLALSDFDKIFEIETDVCGVGIGAVLSQERKPVAYFSEKLNEARQKWSTYDQEFYAV 1004

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            V+ LK W HYL+ ++FV+Y++H+ALK+
Sbjct: 1005 VRALKQWEHYLVQREFVLYTDHQALKY 1031


>emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]
          Length = 372

 Score =  433 bits (1113), Expect = e-119
 Identities = 198/317 (62%), Positives = 258/317 (81%)
 Frame = -3

Query: 953 MCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVRSGDEWKTAFK 774
           MCVDSRAINKITIKYRF IPRLDD+LD + G+ IFSK+DL+SGYHQIR+R  DEWKT+FK
Sbjct: 1   MCVDSRAINKITIKYRFQIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPRDEWKTSFK 60

Query: 773 TKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSVNPVLHVQHLR 594
           TK+ LYEW+VMPFGL+NAPSTFMR+M Q+LKPFIG+FVVVYFD+IL YS +   H +HL+
Sbjct: 61  TKDELYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILTYSRSCEDHEEHLK 120

Query: 593 EVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEWPQPTTITEVR 414
           +V+  LR EK Y  +KKC FMS  V+FLG+++S +G++ D  KI+AI++WP PT I EVR
Sbjct: 121 QVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPKKIKAIVDWPVPTNIHEVR 180

Query: 413 SLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLTSAPILALPNF 234
           S HG+ +FYRRFI +F++IMAPIT CMK   F WT  A ++FEEIK K+ + PIL LP+F
Sbjct: 181 SFHGITTFYRRFIQNFNSIMAPITKCMKPGLFIWTKAANKAFEEIKSKMVNPPILHLPDF 240

Query: 233 ELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVVVQTLKHWRHY 54
           E +FEV CD S +GIGA+LSQ+G  VA++SEK +G + +YSTYD+EF  +VQ ++HW+HY
Sbjct: 241 EKVFEVACDASHVGIGAVLSQEGHLVAFFSEKLNGAKKKYSTYDLEFYAMVQAIRHWQHY 300

Query: 53  LIHKDFVMYSEHEALKH 3
           L +K+F +YS+HEAL++
Sbjct: 301 LSYKEFFLYSDHEALQY 317


>ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
            gi|462402465|gb|EMJ08022.1| hypothetical protein
            PRUPE_ppa025991mg [Prunus persica]
          Length = 1274

 Score =  424 bits (1091), Expect = e-116
 Identities = 195/327 (59%), Positives = 256/327 (78%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            LTPK   +W MCVDS A+NKI +KYRFPIPRL+D+LD+L G+  FSK+DL+SGYHQI +R
Sbjct: 402  LTPKKDCSWGMCVDSCAVNKIIVKYRFPIPRLEDMLDDLAGSQWFSKIDLRSGYHQISIR 461

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKT +GLYEW+VMPFG+SNAPSTFMRVM  +L+P+IGKF+VVYFD+IL+YS 
Sbjct: 462  EGDEWKTAFKTPDGLYEWLVMPFGMSNAPSTFMRVMTHVLRPYIGKFLVVYFDDILIYSR 521

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   H+QHLR + + LR+EK+YA +KKC F+  +VLFLG+ IS  G+  D +K++AI+ W
Sbjct: 522  SREEHIQHLRTIFSTLRKEKLYANLKKCSFLQPQVLFLGFNISAAGVSTDPAKVEAIINW 581

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PTT+TE RS HGL SFYRRFI  FS IMA IT+CMK   F WT  A ++F  +K+K+T
Sbjct: 582  PTPTTLTEARSFHGLTSFYRRFIPGFSIIMALITDCMKQGAFLWTHAAAKAFTILKQKMT 641

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
             AP+   P+   +FEV CD S +GIG +LSQ+G PVAY+SEK +  + RYST+D EF  V
Sbjct: 642  QAPVFRHPDLTKVFEVTCDASGVGIGGVLSQEGHPVAYFSEKLNEAKQRYSTHDKEFYDV 701

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            VQ L++W++YL+  +FV+YS+H+ALK+
Sbjct: 702  VQALRYWQYYLLPNEFVLYSDHQALKY 728


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  424 bits (1090), Expect = e-116
 Identities = 199/328 (60%), Positives = 253/328 (77%), Gaps = 1/328 (0%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMC D RAI+ ITIKYR PIPRLDD+LD L GA +FSK+DLKSGYHQIR+R
Sbjct: 650  LVPKKDGSWRMCTDCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRIR 709

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEWMVMPFGL+NAPSTFMR+MN +L+ F+GKFVVVYFD+IL+YS 
Sbjct: 710  EGDEWKTAFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSK 769

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            N   H  HL+ VL VLR E +YA ++KC F +  V+FLG+I+S +G+ VD+ K++AI EW
Sbjct: 770  NLDDHCIHLKAVLQVLRYENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIREW 829

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCM-KGTKFEWTPDAKRSFEEIKEKL 267
            P P  ++EVRS HGLASFYRRF+  FST+ AP+   + K   F+W    +++F  +KEKL
Sbjct: 830  PPPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKL 889

Query: 266  TSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLV 87
            T AP+LALPNF   FE+ CD S +GIGA+L Q+G P+AY+SEK  G  L YSTYD E   
Sbjct: 890  TQAPVLALPNFSKSFEIECDASNVGIGAVLLQEGHPLAYFSEKLKGAALNYSTYDKELYS 949

Query: 86   VVQTLKHWRHYLIHKDFVMYSEHEALKH 3
            +V+ L+ W+HYL+ K+FV++S+HE+LKH
Sbjct: 950  LVRALQTWQHYLLPKEFVIHSDHESLKH 977


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  414 bits (1063), Expect = e-113
 Identities = 190/328 (57%), Positives = 256/328 (78%), Gaps = 1/328 (0%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVD RAIN IT++YR PIPRLDD+LD L G+ IFSK+DL+SG+HQIR++
Sbjct: 763  LVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMK 822

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEW+VMPFGL+NAPSTFMR+MN +L+ FIGKFVVVYFD+IL+YS 
Sbjct: 823  IGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSK 882

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
                HV H+++VL VLR+E++YA ++KC F + +V+FLG+++SG GI+VD+SK++AI +W
Sbjct: 883  TLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDW 942

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITN-CMKGTKFEWTPDAKRSFEEIKEKL 267
            P P  +++V+S  GLA FYRRF+  FSTI AP+     KG  F+W    +++F+E+K++L
Sbjct: 943  PTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRL 1002

Query: 266  TSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLV 87
            +  P+L LP+F   FEV CD S +GIG +L Q G+PVAY+SEK  G QL YS YD E   
Sbjct: 1003 SEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYA 1062

Query: 86   VVQTLKHWRHYLIHKDFVMYSEHEALKH 3
            +V+ L+ W+HYL  K+FV++S+HEALK+
Sbjct: 1063 LVRALETWQHYLWPKEFVIHSDHEALKY 1090


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  411 bits (1056), Expect = e-112
 Identities = 191/328 (58%), Positives = 255/328 (77%), Gaps = 1/328 (0%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVD RAIN IT+KYR PIPRLDD+LD L G++IFSK+DLKSGYHQIR++
Sbjct: 952  LVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQIRMK 1011

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKT +GLYEW+VMPFGL+NAPSTFMR+MN +L+ FIG+FV+VYFD+ILVYS 
Sbjct: 1012 EGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSK 1071

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   HV+HL+ VL VLR+EK+YA +KKC F +  ++FLG+++S +G+KVD+ K++AI EW
Sbjct: 1072 SLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREW 1131

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCM-KGTKFEWTPDAKRSFEEIKEKL 267
            P P ++ EVRS HGLA FYRRF+  FST+ AP+T  + K   F+W    + +F+ +KEKL
Sbjct: 1132 PSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKL 1191

Query: 266  TSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLV 87
            T AP+L+LP+F   FE+ CD S +GIG +L Q  +P+AY+SEK  G  L Y TYD E   
Sbjct: 1192 THAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYA 1251

Query: 86   VVQTLKHWRHYLIHKDFVMYSEHEALKH 3
            +V+ L+  +HYL  K+FV++++HE+LKH
Sbjct: 1252 LVRALQTGQHYLWPKEFVIHTDHESLKH 1279


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  411 bits (1056), Expect = e-112
 Identities = 195/327 (59%), Positives = 248/327 (75%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            LTPK   +WRMCVDSRAINKITIKYRFPIPRLDD+LD + G+ IFSK+DL+SGYHQIR+R
Sbjct: 624  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIR 683

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKT+FKTK+GLYEW+VMPFGL+NAPSTFMR+M Q+LKPFIG+FVVVYFD+IL+YS 
Sbjct: 684  PGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSR 743

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   H +HL++                                  G++ D  KI+AI++W
Sbjct: 744  SCEDHEEHLKQ----------------------------------GVETDPEKIKAIVDW 769

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCMKGTKFEWTPDAKRSFEEIKEKLT 264
            P PT I EVRS HG+A+FYRRFI +FS+IMAPIT CMK   F WT  A ++FEEIK K+ 
Sbjct: 770  PVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMV 829

Query: 263  SAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLVV 84
            + PIL LP+FE +FEV CD S +GIGA+LSQ+G PVA++SEK +G + +YSTYD+EF  V
Sbjct: 830  NPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAV 889

Query: 83   VQTLKHWRHYLIHKDFVMYSEHEALKH 3
            VQ ++HW+HYL +K+FV+YS+HEAL++
Sbjct: 890  VQAIRHWQHYLSYKEFVLYSDHEALRY 916


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  409 bits (1052), Expect = e-112
 Identities = 190/328 (57%), Positives = 249/328 (75%), Gaps = 1/328 (0%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   +WRMCVD RAIN ITI+YR PIPRLDD+LD L G+ +FSK+DL+SGYHQIR++
Sbjct: 760  LVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMK 819

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEW+VMPFGL+NAPSTFMR+MN++L+PFIGKFVVVYFD+IL+YS 
Sbjct: 820  LGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSK 879

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   H  HLR V   LR  +++  ++KC F +  V FLGY+++ +GI+VD +K++AI  W
Sbjct: 880  SMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSW 939

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPI-TNCMKGTKFEWTPDAKRSFEEIKEKL 267
            P P T+++VRS  GLA FYRRF+  FSTI AP+     KG  F W    + +F  +K+KL
Sbjct: 940  PTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKL 999

Query: 266  TSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLV 87
            T AP+L LP+F   FE+ CD S +G+G +L Q+G+PVAY+SEK  GP L YSTYD E   
Sbjct: 1000 THAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYA 1059

Query: 86   VVQTLKHWRHYLIHKDFVMYSEHEALKH 3
            +V+TL+ W+HYL  K+FV++S+HE+LKH
Sbjct: 1060 LVRTLETWQHYLWPKEFVIHSDHESLKH 1087



 Score =  246 bits (629), Expect = 8e-63
 Identities = 123/277 (44%), Positives = 179/277 (64%), Gaps = 3/277 (1%)
 Frame = -3

Query: 824  YHQIRVRSGDEWKT--AFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVY 651
            +H+     GD+  T  +     GLYE+ VM FGL+NAP+ FM +MN++   ++ KFVVV+
Sbjct: 1603 HHKFAATIGDDRATNPSGFASYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVF 1662

Query: 650  FDNILVYSVNPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDD 471
             D+ILVYS +   H  HLR VL  LR  ++YA++ KCEF   EV FLG++IS +G+ VD 
Sbjct: 1663 IDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDP 1722

Query: 470  SKIQAILEWPQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITNCM-KGTKFEWTPDAKR 294
              + A+ +W QP T+T++RS  GLA +YRRFI +FS I  P+T  + K  KF W+P  ++
Sbjct: 1723 ETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEK 1782

Query: 293  SFEEIKEKLTSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRY 114
            +F+ +KEKL S+P+L LP+    F V+CD S  G+G +L Q+G  VAY S +    +  Y
Sbjct: 1783 AFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNY 1842

Query: 113  STYDMEFLVVVQTLKHWRHYLIHKDFVMYSEHEALKH 3
             T+D+E   VV  LK WRHYLI     +Y++H++LK+
Sbjct: 1843 PTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKY 1879


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  408 bits (1049), Expect = e-111
 Identities = 192/328 (58%), Positives = 248/328 (75%), Gaps = 1/328 (0%)
 Frame = -3

Query: 983  LTPKMY*TWRMCVDSRAINKITIKYRFPIPRLDDILDNLCGATIFSKLDLKSGYHQIRVR 804
            L PK   TWRMCVD RAIN ITI+YR PIPRLDD+LD L GA +FSK+DL+SGYHQIR++
Sbjct: 763  LVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMK 822

Query: 803  SGDEWKTAFKTKEGLYEWMVMPFGLSNAPSTFMRVMNQILKPFIGKFVVVYFDNILVYSV 624
             GDEWKTAFKTK GLYEW+VMPFGL+NAPSTFMR+MN++L+ FIGKFVVVYFD+IL+YS 
Sbjct: 823  LGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSK 882

Query: 623  NPVLHVQHLREVLTVLRREKMYAQMKKCEFMSLEVLFLGYIISGEGIKVDDSKIQAILEW 444
            +   HV H+R V   LR  +++  ++KC F +  V FLGY+++ +GI+VD +K++AI  W
Sbjct: 883  SMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHGW 942

Query: 443  PQPTTITEVRSLHGLASFYRRFIHHFSTIMAPITN-CMKGTKFEWTPDAKRSFEEIKEKL 267
            P P TIT+VRS  GLA FYRRF+  FSTI AP+     KG  F W    + +F  +K+KL
Sbjct: 943  PMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKL 1002

Query: 266  TSAPILALPNFELLFEVHCDGSKLGIGALLSQQGRPVAYYSEKFHGPQLRYSTYDMEFLV 87
            T AP+L LP+F   FE+ CD S +G+G +L Q+G+PVAY+SEK  G  L YSTYD E   
Sbjct: 1003 THAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYA 1062

Query: 86   VVQTLKHWRHYLIHKDFVMYSEHEALKH 3
            +V+TL+ W+HYL  K+FV++S+HE+LKH
Sbjct: 1063 LVRTLETWQHYLWPKEFVIHSDHESLKH 1090