BLASTX nr result

ID: Cocculus23_contig00042734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042734
         (287 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    60   4e-07
ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein A...    59   7e-07
ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264...    57   2e-06
ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06
ref|XP_004231462.1| PREDICTED: uncharacterized protein LOC101258...    56   6e-06
ref|XP_004253276.1| PREDICTED: putative ribonuclease H protein A...    55   8e-06

>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/77 (35%), Positives = 41/77 (53%)
 Frame = +1

Query: 49   AEAKAMMEXXXXXXXXXXXXXEIQIDSKLLVRWINDSASCPWRITPIIDIVLSNLKNLSD 228
            AE KA +              E+++DSKLL  WIN + + PWR   +I  +   ++ +  
Sbjct: 1329 AEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQ 1388

Query: 229  WRCKHVYREANRVADWL 279
            ++C H+YREAN  AD L
Sbjct: 1389 FQCHHIYREANCTADLL 1405


>ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = +1

Query: 49  AEAKAMMEXXXXXXXXXXXXXEIQIDSKLLVRWINDSASCPWRITPIIDIVLSNLKNLSD 228
           AE KA +              E+++DS+LL +WIN++   PWR    +  +    + L  
Sbjct: 56  AEIKATLYGLDWCEQHGYKSIELEVDSELLCKWINNTVGIPWRCQQTVQQIQDISRKLDY 115

Query: 229 WRCKHVYREANRVADWL 279
           ++CKHVYREAN  AD L
Sbjct: 116 FQCKHVYREANSTADLL 132


>ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264807 [Solanum
           lycopersicum]
          Length = 934

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/55 (43%), Positives = 38/55 (69%)
 Frame = +1

Query: 115 IQIDSKLLVRWINDSASCPWRITPIIDIVLSNLKNLSDWRCKHVYREANRVADWL 279
           +++DS+LLV+WI ++ S PWR  P I  +    KN+  ++C+H+YREAN  A+ L
Sbjct: 831 LEVDSELLVKWITNTQSIPWRSQPDIQQLQDISKNMEYFQCQHIYREANATAELL 885


>ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = +1

Query: 112 EIQIDSKLLVRWINDSASCPWRITPIIDIVLSNLKNLSDWRCKHVYREANRVADWL 279
           E+++DS+++ +WIN+    PWR    +  +L  +  L  + CKH+YREAN  AD L
Sbjct: 77  ELEVDSEMICQWINNIIKPPWRCQQTVQQLLQTISKLQYFHCKHIYREANNTADLL 132


>ref|XP_004231462.1| PREDICTED: uncharacterized protein LOC101258709 [Solanum
           lycopersicum]
          Length = 845

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/55 (43%), Positives = 37/55 (67%)
 Frame = +1

Query: 115 IQIDSKLLVRWINDSASCPWRITPIIDIVLSNLKNLSDWRCKHVYREANRVADWL 279
           +++DS+LLV+WIN++   PWR    I  +    KN+  ++C+H+YREAN  AD L
Sbjct: 742 LEVDSELLVKWINNTQYIPWRSQQDIQQLQDISKNMEYFQCQHIYREANATADLL 796


>ref|XP_004253276.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 174

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/55 (43%), Positives = 34/55 (61%)
 Frame = +1

Query: 115 IQIDSKLLVRWINDSASCPWRITPIIDIVLSNLKNLSDWRCKHVYREANRVADWL 279
           +++DS+LL  WIN+  + PWR  P I  +L     L  + CKH++REAN  AD L
Sbjct: 71  LEVDSELLCNWINNIINTPWRCYPTIQQILQIKSKLEYFHCKHIFREANCTADLL 125


Top