BLASTX nr result
ID: Cocculus23_contig00042517
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00042517
(732 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi... 189 8e-46
ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containi... 177 3e-42
gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis] 160 4e-37
ref|XP_002315764.2| hypothetical protein POPTR_0010s09620g [Popu... 156 6e-36
ref|XP_006419961.1| hypothetical protein CICLE_v10004433mg [Citr... 151 2e-34
ref|XP_006489412.1| PREDICTED: pentatricopeptide repeat-containi... 151 3e-34
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ... 151 3e-34
ref|XP_007157120.1| hypothetical protein PHAVU_002G044500g [Phas... 148 2e-33
ref|XP_007034786.1| Pentatricopeptide repeat (PPR) superfamily p... 148 2e-33
ref|XP_004247664.1| PREDICTED: pentatricopeptide repeat-containi... 146 8e-33
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi... 146 8e-33
ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containi... 145 1e-32
ref|XP_004499920.1| PREDICTED: pentatricopeptide repeat-containi... 143 7e-32
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ... 142 1e-31
ref|XP_002517120.1| pentatricopeptide repeat-containing protein,... 140 4e-31
ref|XP_006283207.1| hypothetical protein CARUB_v10004238mg [Caps... 140 6e-31
ref|XP_006414634.1| hypothetical protein EUTSA_v10027503mg [Eutr... 129 1e-27
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar... 128 2e-27
gb|EPS64911.1| hypothetical protein M569_09864 [Genlisea aurea] 115 1e-23
ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containi... 110 6e-22
>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
protein product [Vitis vinifera]
Length = 727
Score = 189 bits (480), Expect = 8e-46
Identities = 96/138 (69%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMR-EGRGV 448
+ S LSSSLDYALSVFN I P PETHLCN LRE SRS EPEK++ VY +MR +G V
Sbjct: 62 VISSCALSSSLDYALSVFNLI-PKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAV 120
Query: 449 DRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLF 628
DRFSFPPLLKAL+R+ +L EG+E+HGLA+K+GFDSDPFVQTGLVR+YAA GR+ AR +F
Sbjct: 121 DRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMF 180
Query: 629 DKMPYRDVVAWNVMIDGY 682
DKM +RDVV W++MIDGY
Sbjct: 181 DKMFHRDVVTWSIMIDGY 198
Score = 61.2 bits (147), Expect = 3e-07
Identities = 36/129 (27%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Frame = +2
Query: 302 LDYALSVFNQISPCPETHLC-NAILREFSRSAEPEKSIWVYAKMRE-GRGVDRFSFPPLL 475
++ A SVFNQ+ + +C +A++ ++ S P++++ ++ +M+ G D+ + ++
Sbjct: 305 IENARSVFNQM--VKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362
Query: 476 KALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVV 655
A A + AL + +H K GF + L+ +YA G + AR++FDKMP ++V+
Sbjct: 363 TACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVI 422
Query: 656 AWNVMIDGY 682
+W MI +
Sbjct: 423 SWTCMISAF 431
>ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Fragaria vesca subsp. vesca]
Length = 736
Score = 177 bits (450), Expect = 3e-42
Identities = 90/132 (68%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Frame = +2
Query: 290 LSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMR-EGRGVDRFSFP 466
LS SL Y LS+F+QI P P+THLCN +LRE SR EPEK++ VY MR EG +DRFSFP
Sbjct: 77 LSPSLHYPLSLFHQI-PKPQTHLCNKLLRELSRCREPEKALLVYETMRREGVALDRFSFP 135
Query: 467 PLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYR 646
PLLKA++R L EG+E+HGLA K+G+DSDPFVQT LVR+YAA GRV ARQ+FDKMP R
Sbjct: 136 PLLKAVSRAVVLAEGLEIHGLACKLGYDSDPFVQTVLVRMYAACGRVMDARQVFDKMPSR 195
Query: 647 DVVAWNVMIDGY 682
DVVAW++MIDGY
Sbjct: 196 DVVAWSIMIDGY 207
Score = 58.2 bits (139), Expect = 3e-06
Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Frame = +2
Query: 311 ALSVFNQISPCPETHLC-NAILREFSRSAEPEKSIWVYAKMR-EGRGVDRFSFPPLLKAL 484
A +F+QI + +C +A++ ++ S +P +++ ++++M G D + ++ A
Sbjct: 317 ARKIFDQI--VQKDLVCWSAMISGYAESDQPREALRLFSEMEVSGLRPDPVTMLSVISAC 374
Query: 485 ARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVAWN 664
+ + AL + VH GF + L+ +YA G + ARQ+F+KMP R+V++W
Sbjct: 375 SHLGALDQAKWVHSYVDTNGFSGALSINNALIDMYAKCGSLERARQVFEKMPRRNVISWT 434
Query: 665 VMIDGY 682
MI +
Sbjct: 435 TMISAF 440
>gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]
Length = 728
Score = 160 bits (405), Expect = 4e-37
Identities = 84/139 (60%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Frame = +2
Query: 269 AIASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMR-EGRG 445
A+AS SLDYALSVF +I P PE L N +LRE SR + +K++ VY +MR EG
Sbjct: 62 ALASCVLSPPSLDYALSVFARI-PDPEPRLSNKLLREVSRRGDADKTLLVYGRMRREGSS 120
Query: 446 VDRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQL 625
VDR+SFP +LKA + AL EG E+HGLA+KMGFDSDPFVQTGLVR+YA GR+ R +
Sbjct: 121 VDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFDSDPFVQTGLVRMYAGCGRILDGRLV 180
Query: 626 FDKMPYRDVVAWNVMIDGY 682
FDKM RDVVAW++MIDGY
Sbjct: 181 FDKMSQRDVVAWSIMIDGY 199
>ref|XP_002315764.2| hypothetical protein POPTR_0010s09620g [Populus trichocarpa]
gi|550329457|gb|EEF01935.2| hypothetical protein
POPTR_0010s09620g [Populus trichocarpa]
Length = 721
Score = 156 bits (395), Expect = 6e-36
Identities = 81/133 (60%), Positives = 99/133 (74%), Gaps = 3/133 (2%)
Frame = +2
Query: 293 SSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMR--EGR-GVDRFSF 463
SSSLDYALSVF + C T L N + R SRSA+PE ++ Y K+R EG G+DRFSF
Sbjct: 61 SSSLDYALSVFTHLPKC-HTPLSNKLFRSLSRSAKPETALLAYEKIRLKEGLLGIDRFSF 119
Query: 464 PPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPY 643
PPLLKA +R L EG E+HG+A+K+GFD DPFVQTGLV +YA+ R+ AR +FDKM Y
Sbjct: 120 PPLLKAASRASGLNEGKEIHGVATKLGFDKDPFVQTGLVGMYASCDRISEARLVFDKMSY 179
Query: 644 RDVVAWNVMIDGY 682
RDVVAW++MIDGY
Sbjct: 180 RDVVAWSIMIDGY 192
>ref|XP_006419961.1| hypothetical protein CICLE_v10004433mg [Citrus clementina]
gi|557521834|gb|ESR33201.1| hypothetical protein
CICLE_v10004433mg [Citrus clementina]
Length = 722
Score = 151 bits (382), Expect = 2e-34
Identities = 78/134 (58%), Positives = 98/134 (73%), Gaps = 1/134 (0%)
Frame = +2
Query: 284 TTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKM-REGRGVDRFS 460
TT SSL YALS+F+QI P P + + N +R S S P+ ++ V+ KM EG +DRFS
Sbjct: 61 TTTPSSLYYALSIFSQI-PAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFS 119
Query: 461 FPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMP 640
FPP+LKA+AR L EGM+VHGL +K+GF SDPFVQTGLV +Y A GR+ AR +FDKM
Sbjct: 120 FPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMS 179
Query: 641 YRDVVAWNVMIDGY 682
YRD+V W+VMIDGY
Sbjct: 180 YRDIVPWSVMIDGY 193
>ref|XP_006489412.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Citrus sinensis]
Length = 722
Score = 151 bits (381), Expect = 3e-34
Identities = 78/134 (58%), Positives = 98/134 (73%), Gaps = 1/134 (0%)
Frame = +2
Query: 284 TTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKM-REGRGVDRFS 460
TT SSL YALS+F+QI P + + N +R SRS P+ ++ V+ KM EG +DRFS
Sbjct: 61 TTTPSSLYYALSIFSQIL-APPSRVSNKFIRAISRSHRPKHALKVFLKMLNEGLTIDRFS 119
Query: 461 FPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMP 640
FPP+LKA+AR L EGM+VHGL +K+GF SDPFVQTGLV +Y A GR+ AR +FDKM
Sbjct: 120 FPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMS 179
Query: 641 YRDVVAWNVMIDGY 682
YRD+V W+VMIDGY
Sbjct: 180 YRDIVPWSVMIDGY 193
>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 726
Score = 151 bits (381), Expect = 3e-34
Identities = 76/140 (54%), Positives = 103/140 (73%), Gaps = 2/140 (1%)
Frame = +2
Query: 269 AIASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMR--EGR 442
+I + ++ SSSL YALSVF+QI P P TH N +LR SRS+ PEK+I++Y +R
Sbjct: 59 SICTLSSSSSSLHYALSVFSQI-PNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAF 117
Query: 443 GVDRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQ 622
+DRFSFP LLKA++++ A G+E+HGLASK+GF DPF+QTGL+ +YA+ R+ AR
Sbjct: 118 ALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARL 177
Query: 623 LFDKMPYRDVVAWNVMIDGY 682
LFDKM + D VAWN++IDGY
Sbjct: 178 LFDKMCHPDAVAWNMIIDGY 197
Score = 58.2 bits (139), Expect = 3e-06
Identities = 27/108 (25%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 362 NAILREFSRSAEPEKSIWVYAKMREGRGV-DRFSFPPLLKALARICALREGMEVHGLASK 538
+A++ ++ S +P++++ ++ +M + R V D+ + ++ A + + AL + +H +
Sbjct: 323 SAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDR 382
Query: 539 MGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVAWNVMIDGY 682
GF V L+ +YA G + AR++F+ MP ++V++W+ MI+ +
Sbjct: 383 SGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAF 430
>ref|XP_007157120.1| hypothetical protein PHAVU_002G044500g [Phaseolus vulgaris]
gi|561030535|gb|ESW29114.1| hypothetical protein
PHAVU_002G044500g [Phaseolus vulgaris]
Length = 713
Score = 148 bits (373), Expect = 2e-33
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMRE-GRGV 448
+ S ++ S+L YALS+F I P P+T N + R FSR PE ++ +Y +R G +
Sbjct: 47 LPSSSSSPSALHYALSLFTHI-PNPDTRFSNQLFRHFSRGPSPESTLRLYRLLRRNGTLL 105
Query: 449 DRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLF 628
DRFSFPPLLKA++++ AL G+EVHGLASK+GF DPF++T L+ +YAA GR+ AR +F
Sbjct: 106 DRFSFPPLLKAVSKLSALNMGLEVHGLASKLGFHDDPFIETALIAMYAACGRIMDARLVF 165
Query: 629 DKMPYRDVVAWNVMIDGY 682
DKM +RDVV WN+MIDGY
Sbjct: 166 DKMSHRDVVTWNIMIDGY 183
Score = 59.3 bits (142), Expect = 1e-06
Identities = 29/108 (26%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +2
Query: 362 NAILREFSRSAEPEKSIWVYAKMREGRGV-DRFSFPPLLKALARICALREGMEVHGLASK 538
+A++ ++ S +P++++ ++ +M+ R V D+ + ++ A A + AL + +H A K
Sbjct: 309 SAMISGYAESDQPQEALRLFNEMQRQRIVPDQITMLSVISACAHVGALVKARWIHSYADK 368
Query: 539 MGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVAWNVMIDGY 682
GF + L+ +YA G + AR++F+ MP ++V++W+ MI+ +
Sbjct: 369 NGFGRALPINNALIDMYAKCGNLARAREVFENMPRKNVISWSSMINAF 416
Score = 57.8 bits (138), Expect = 4e-06
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +2
Query: 362 NAILREFSRSAEPEKSIWVYAKMR-EGRGVDRFSFPPLLKALARICALREGMEVHGLASK 538
N ++ +S+S + + +Y +M+ G D +L A L G +H
Sbjct: 177 NIMIDGYSQSGHYDHVLRLYEEMKGSGMEPDSIILCTVLSACGHAGNLSYGKAIHEFIKD 236
Query: 539 MGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVAWNVMIDGYVYIRAV 700
GF D +QT LV +YA G ++LAR+++DK+P + +V M+ GY I V
Sbjct: 237 NGFRVDSHLQTALVNMYANCGAMYLAREVYDKLPSKHLVVSTAMLSGYAKIGLV 290
>ref|XP_007034786.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508713815|gb|EOY05712.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 722
Score = 148 bits (373), Expect = 2e-33
Identities = 75/138 (54%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMR-EGRGV 448
I S SL Y+LS+F+ + P P L +R SRS+ PE +++VY ++R EG +
Sbjct: 57 ILKLLLFSPSLPYSLSIFSHL-PHPLPSLSTRFVRHLSRSSRPEFALFVYQRLRNEGIKI 115
Query: 449 DRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLF 628
DRF+FPPLLKA+AR+ L EG E+HG K+G DSDPFVQTGLV +Y A GRV AR +F
Sbjct: 116 DRFTFPPLLKAVARVEGLAEGKEIHGFGFKLGLDSDPFVQTGLVGMYLACGRVLEARSVF 175
Query: 629 DKMPYRDVVAWNVMIDGY 682
DKM YRD+VAW++MIDGY
Sbjct: 176 DKMSYRDIVAWSIMIDGY 193
>ref|XP_004247664.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Solanum lycopersicum]
Length = 722
Score = 146 bits (368), Expect = 8e-33
Identities = 76/138 (55%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSI-WVYAKMREGRGV 448
I S L SSL Y+LS+F+ + P THL N + RE SRS EP ++ ++ R G V
Sbjct: 61 ILSSIPLPSSLQYSLSIFSTLQN-PRTHLINKLFRELSRSKEPHNALLFLENGRRNGLEV 119
Query: 449 DRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLF 628
DRFSFPPLLKA +R ALREGME+HGL K+GF SDPF+QT L+ +YA SG++ AR +F
Sbjct: 120 DRFSFPPLLKAASRAFALREGMEIHGLGCKLGFISDPFIQTALLGMYANSGQIQDARLVF 179
Query: 629 DKMPYRDVVAWNVMIDGY 682
DKM RD+V W++MIDGY
Sbjct: 180 DKMSERDIVTWDIMIDGY 197
>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 146 bits (368), Expect = 8e-33
Identities = 74/131 (56%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Frame = +2
Query: 296 SSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMRE-GRGVDRFSFPPL 472
S+LDYALS+F+ I P P T N +LR+FSR PE ++ +Y +R G +DRFSFPPL
Sbjct: 63 SALDYALSLFSHI-PNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPL 121
Query: 473 LKALARICALREGMEVHGLASKMGF-DSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRD 649
LKA++++ AL G+E+HGLASK GF +DPF+Q+ L+ +YAA GR+ AR LFDKM +RD
Sbjct: 122 LKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRD 181
Query: 650 VVAWNVMIDGY 682
VV WN+MIDGY
Sbjct: 182 VVTWNIMIDGY 192
Score = 57.8 bits (138), Expect = 4e-06
Identities = 29/108 (26%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 362 NAILREFSRSAEPEKSIWVYAKMREGRGV-DRFSFPPLLKALARICALREGMEVHGLASK 538
+A++ ++ S +P +++ ++ +M+ R V D+ + ++ A A + AL + +H A K
Sbjct: 318 SAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK 377
Query: 539 MGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVAWNVMIDGY 682
GF + L+ +YA G + AR++F+ MP ++V++W+ MI+ +
Sbjct: 378 NGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAF 425
>ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Solanum tuberosum]
Length = 723
Score = 145 bits (366), Expect = 1e-32
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSI-WVYAKMREGRGV 448
I S L SSL Y+LS+F+ + P THL N + RE SRS EP ++ ++ R G V
Sbjct: 61 ILSSIPLPSSLHYSLSIFSTLQN-PRTHLINKLFRELSRSKEPHNALLFLENGRRNGLEV 119
Query: 449 DRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLF 628
DRFSFPPLLKA +R AL EGME+HGL K+GFDSDPF+QT L+ +YA G + AR +F
Sbjct: 120 DRFSFPPLLKAASRAFALCEGMEIHGLGCKLGFDSDPFIQTALLGMYANCGHIQDARLVF 179
Query: 629 DKMPYRDVVAWNVMIDGY 682
DKM RD+VAW++MIDGY
Sbjct: 180 DKMSERDIVAWDIMIDGY 197
>ref|XP_004499920.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Cicer arietinum]
Length = 714
Score = 143 bits (360), Expect = 7e-32
Identities = 71/139 (51%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMREGRG-- 445
+ S ++ SS+L YALSVF+Q P +TH N +LR SRS P ++++Y +R
Sbjct: 48 VLSSSSSSSTLHYALSVFSQF-PNTDTHFSNQLLRHLSRSPTPHNTLFLYHNLRTTNAFT 106
Query: 446 VDRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQL 625
+D FSFPPLLKA++++ A G+E+HGLASK+GF SDPF+QT L+ +YA+ R+ AR L
Sbjct: 107 LDSFSFPPLLKAVSKLSAFNHGLEIHGLASKLGFLSDPFIQTALIAMYASCRRIMDARLL 166
Query: 626 FDKMPYRDVVAWNVMIDGY 682
FDKM +RD VAWN +IDGY
Sbjct: 167 FDKMSHRDAVAWNTIIDGY 185
>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314084|gb|EFH44507.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 725
Score = 142 bits (358), Expect = 1e-31
Identities = 71/136 (52%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Frame = +2
Query: 278 SFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMRE-GRGVDR 454
SF++ S +L YAL++F+ ISP PE+ + N++LR+ SRS EP +I Y ++R G DR
Sbjct: 55 SFSSSSINLSYALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDR 114
Query: 455 FSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDK 634
SFPP+LKA++++ AL EGME+HG A K+ SDPFV+TGL+ +YAA GR+ AR +FD+
Sbjct: 115 ISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDE 174
Query: 635 MPYRDVVAWNVMIDGY 682
M RDVV WN MI+ Y
Sbjct: 175 MSQRDVVTWNTMIERY 190
>ref|XP_002517120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543755|gb|EEF45283.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 477
Score = 140 bits (353), Expect = 4e-31
Identities = 72/139 (51%), Positives = 99/139 (71%), Gaps = 2/139 (1%)
Frame = +2
Query: 272 IASFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMREGR--G 445
++S ++ SSL+YALSVF I P P L N +LR SRS++PE + VY K+RE G
Sbjct: 63 LSSSSSSISSLNYALSVFTHI-PTPHPTLSNKLLRALSRSSKPETVLLVYQKIREDGLFG 121
Query: 446 VDRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQL 625
+D+FSFP +LKA A+I AL +GME+HG+ +K+ F DPF+QTGL+ +Y G++ AR +
Sbjct: 122 LDKFSFPFILKAAAKIAALNDGMEIHGVLAKLDFYKDPFLQTGLMGMYVGCGKILEARLV 181
Query: 626 FDKMPYRDVVAWNVMIDGY 682
FDKM YRDVV W+ MI+GY
Sbjct: 182 FDKMSYRDVVTWSTMINGY 200
>ref|XP_006283207.1| hypothetical protein CARUB_v10004238mg [Capsella rubella]
gi|482551912|gb|EOA16105.1| hypothetical protein
CARUB_v10004238mg [Capsella rubella]
Length = 724
Score = 140 bits (352), Expect = 6e-31
Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Frame = +2
Query: 281 FTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMREGRG-VDRF 457
F++ S SL YALS+F+ I PE+ + N LR+ SRS EP +I Y ++R G +D+F
Sbjct: 56 FSSSSISLSYALSLFSSIPTPPESVVFNPFLRDLSRSNEPRATILFYQRIRHAGGRLDQF 115
Query: 458 SFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKM 637
SFPP+LKA ++ A EGME+HG+A KM SDPFVQTGL+ +YA+ GR+ AR +FD+M
Sbjct: 116 SFPPILKAACKVSAFFEGMEIHGVAFKMATLSDPFVQTGLMDMYASCGRIECARNVFDEM 175
Query: 638 PYRDVVAWNVMIDGYVYIRAVLHCYLLD 721
RDVV WN MID Y C LLD
Sbjct: 176 SQRDVVTWNTMIDRY------CRCGLLD 197
>ref|XP_006414634.1| hypothetical protein EUTSA_v10027503mg [Eutrema salsugineum]
gi|557115804|gb|ESQ56087.1| hypothetical protein
EUTSA_v10027503mg [Eutrema salsugineum]
Length = 724
Score = 129 bits (323), Expect = 1e-27
Identities = 66/131 (50%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Frame = +2
Query: 293 SSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMREGRG-VDRFSFPP 469
S S YALS+F+ I PE+ + N +LR SRS E +I Y ++R G +D+FSFPP
Sbjct: 60 SISFSYALSLFSSIPSPPESIVFNPLLRNLSRSGEFRATILFYQRIRHAGGRLDQFSFPP 119
Query: 470 LLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRD 649
+LKA +++ AL EG+E+HG+A KM SDPFVQTGL+ +Y + GR+ AR +FD+M RD
Sbjct: 120 ILKAASKVSALLEGLELHGVALKMATLSDPFVQTGLMDMYGSCGRIVEARNMFDEMSQRD 179
Query: 650 VVAWNVMIDGY 682
VV WN MI+ Y
Sbjct: 180 VVTWNTMIERY 190
Score = 69.7 bits (169), Expect = 1e-09
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Frame = +2
Query: 269 AIASFTTLSSSLDYALSVFNQISPCPETHLC-NAILREFSRSAEPEKSIWVYAKMR-EGR 442
A+ S + + LD A VF+Q+ + +C ++ ++ S PE+++ ++ +MR G
Sbjct: 286 AMVSGFSKAGRLDEARDVFDQMRK--KDLVCWTTMISTYAESDHPEEALRIFEEMRLSGV 343
Query: 443 GVDRFSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQ 622
D + ++ A A + AL + VH GF+S V L+ +YA GR+ AR
Sbjct: 344 KPDEITMCSVISACANLGALEKAKWVHEYTHVNGFESSLTVNNALINMYAKCGRLDAARD 403
Query: 623 LFDKMPYRDVVAWNVMIDGY 682
+F+KMP +DVV+W+ MI+ +
Sbjct: 404 VFEKMPTKDVVSWSSMINAF 423
>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein
[Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 722
Score = 128 bits (322), Expect = 2e-27
Identities = 65/136 (47%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Frame = +2
Query: 278 SFTTLSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMRE-GRGVDR 454
S ++ S +L YAL+VF+ I PE+ + N LR+ SRS+EP +I Y ++R G +D+
Sbjct: 52 SVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQ 111
Query: 455 FSFPPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDK 634
FSF P+LKA++++ AL EGME+HG+A K+ DPFV+TG + +YA+ GR+ AR +FD+
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 635 MPYRDVVAWNVMIDGY 682
M +RDVV WN MI+ Y
Sbjct: 172 MSHRDVVTWNTMIERY 187
>gb|EPS64911.1| hypothetical protein M569_09864 [Genlisea aurea]
Length = 728
Score = 115 bits (289), Expect = 1e-23
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Frame = +2
Query: 308 YALSVFNQISP--CPETHLCNAILREFSRSAEPEKSIWVY-AKMREGRGVDRFSFPPLLK 478
YALS+ + + P HL N I+ SRS++ +I + A +R+ +DRFSFPP++K
Sbjct: 72 YALSLISYLPHHYSPTFHLTNKIINHLSRSSDNRNAILFFQAMLRKDFPIDRFSFPPMIK 131
Query: 479 ALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVA 658
++ AL EG H LA+K+G+DSDPFV+T L+ +Y A G + AR LFD M ++D+VA
Sbjct: 132 TASKARALDEGRMFHALAAKLGYDSDPFVETALMGMYGACGLISDARFLFDAMSHKDIVA 191
Query: 659 WNVMIDGY 682
WN+MIDGY
Sbjct: 192 WNIMIDGY 199
Score = 60.5 bits (145), Expect = 6e-07
Identities = 38/107 (35%), Positives = 58/107 (54%)
Frame = +2
Query: 362 NAILREFSRSAEPEKSIWVYAKMREGRGVDRFSFPPLLKALARICALREGMEVHGLASKM 541
N ++ + +S + ++ + +M+ G D F +L AR L G VH L S+
Sbjct: 193 NIMIDGYCQSQLFDDALALLEEMKSGVEPDERIFTTILSGCARFKKLDIGKSVHELISRS 252
Query: 542 GFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPYRDVVAWNVMIDGY 682
G D +QT LV +YA SG + LA+ L+DKM ++VVA VMI G+
Sbjct: 253 GTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKIKNVVASTVMITGH 299
>ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 110 bits (274), Expect = 6e-22
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Frame = +2
Query: 290 LSSSLDYALSVFNQISPCPETHLCNAILREFSRSAEPEKSIWVYAKMREGRGV--DRFSF 463
L ++DYALS+FN I PE+ N ++R + P+ ++ ++ KM E + V D+F+F
Sbjct: 67 LPDTIDYALSIFNHIDK-PESSAYNVMIRGLAFKRSPDNALLLFKKMHE-KSVQHDKFTF 124
Query: 464 PPLLKALARICALREGMEVHGLASKMGFDSDPFVQTGLVRLYAASGRVWLARQLFDKMPY 643
+LKA +R+ ALREG +VH L K GF S+ FV+ L+++YA G++ +AR +FD MP
Sbjct: 125 SSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPE 184
Query: 644 RDVVAWNVMIDGY 682
R +VAWN M+ GY
Sbjct: 185 RSIVAWNSMLSGY 197